Gene soybn_pan_p021093
Sequence ID | soybn_pan_p021093 add to my list | ||
---|---|---|---|
Species | Glycine max | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 171aa | ||
Gene Ontology |
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Length: 171 amino acids
>soybn_pan_p021093_SOYBN MSLKSSKRRMRNGFMCHSEASTAVCIAGSVVVPRTRSRRHQRSVSLDGTRLINYAKYSKL VDSSTSSRFNSAHKKCDSDSVSVPNIKHQENESRELQKKPTDNVFQVVVMRVAIHCQGCA GKVKKHLSKMEGVTSFSVDVESKRVTVMGHISPVGVLESISKVKRAEFWDC
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP040905 | Unannotated cluster |
4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for soybn_pan_p021093
Represented sequence(s):
SOYBN_ZH13
SOYBN_Wm82_a2_v1.0
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
FvH4_5g30890.1 | orthology | 0.671 | 5 | - | - |
Oeu026170.2 | orthology | 0.752 | 3 | - | - |
cajca.ICPL87119.gnm1.ann1.C.cajan_22288.1 | orthology | 0.134 | 2 | 265 | 2.76e-92 |
cocnu_pan_p025689 | orthology | 0.58 | 4 | - | - |
maldo_pan_p006499 | orthology | 0.863 | 5 | 115 | 1.49e-32 |
phavu.G19833.gnm2.ann1.Phvul.006G207900.1 | orthology | 0.259 | 2 | 223 | 1.52e-75 |
soybn_pan_p029731 | ultra-paralogy | 0.0559 | 0 | - | - |