Gene soybn_pan_p022429


Sequence ID soybn_pan_p022429  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Core (2/2)
Length 146aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 146 amino acids

>soybn_pan_p022429_SOYBN
MGALDFLSDYFSVSTPKKKRKPMQTVEIKVKMDCDGCERRVRNSVSNMSGVKQVEVNRKQ
SKVTVTGYVDRNKVLKKVQSTGKRAEFWPYIQYNLVAYPYVVQAYDKKAPSGYVKNTEQA
LPNPNAPDEKLTSLFSDDNPNACSIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP463678 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for soybn_pan_p022429



Represented sequence(s):
SOYBN_ZH13
SoyZH13_10G244500.m1
SoyZH13_20G112900.m1
SOYBN_Wm82_a2_v1.0
Glyma10g41040.1
Glyma20g26230.1
Download sequences FASTA

  1. 2. 3. 4.
1. Glyma10g41040.1 0.00 2.78 -0.00 2.78
2. Glyma20g26230.1 2.78 0.00 2.78 -0.00
3. SoyZH13_10G244500.m1 -0.00 2.78 0.00 2.78
4. SoyZH13_20G112900.m1 2.78 -0.00 2.78 0.00