Gene soybn_pan_p024179


Sequence ID soybn_pan_p024179  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Core (2/2)
Length 314aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 314 amino acids

>soybn_pan_p024179_SOYBN
MGEEAKQEQVQPVAEAKPEEKKEEKAEEKPAEEKKEEKPEEKTEDEKKEEPKPPSPCVLF
VDLHCEGCAKKIERYIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNTITKKTKRRASVI
SPLPEAEGEPIPEVVNSQVSGPVTVELNVNMHCEACAEQLKRKILQMRGVQTAMTEFSTG
KVLVTGIMDANKLVDYVYRRTKKQAKIVPQPEPEPEKKEEKPAEEETKPEEEKPPEEAKK
EEGGENKEEKGGEESKEEAKKEENNVVVVPYNNIDDEGLKRMMYYYQYPPLSVIERIPPP
QLFSDENPNACCIV


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015545		 Heavy metal transport/detoxification group1
3 GP126431 Unannotated cluster
4 GP077890 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for soybn_pan_p024179



Represented sequence(s):
SOYBN_ZH13
SoyZH13_02G203300.m1
SOYBN_Wm82_a2_v1.0
Glyma02g38750.3
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
cajca.ICPL87119.gnm1.ann1.C.cajan_40313.1 orthology 0.0635 2 340 1.08e-117
phavu.G19833.gnm2.ann1.Phvul.008G189300.1 orthology 0.076 2 - -