Gene soybn_pan_p033623


Sequence ID soybn_pan_p033623  add to my list
Species Glycine max
Alias No gene alias
Pangenome status Core (2/2)
Length 223aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 223 amino acids

>soybn_pan_p033623_SOYBN
MGPTYSDMGCKLALEDKKRVAFRRRHRHEHVDATRHAKPCNCSSLASQQQKGHRTKEKLI
QFLCSSCLLCVCCPLACVCCFIKLPCRICHQALRCAQKWACYGSKNNRTVVLKVGMSCQG
CAGAVNRILGKMEGIFIPASYLYYQIQNENDLVIVAMYFNSNILTPTINYGCHLHSSDTG
ITDIALHSSGIKSEKGIYTRHIWTLCNVALLSISTTRIYKQGI


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP239638 Unannotated cluster
3 GP341755 Unannotated cluster
4 GP506789 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for soybn_pan_p033623



Represented sequence(s):
SOYBN_Wm82_a2_v1.0
Glyma0022s00346.1
SOYBN_ZH13
SoyZH13_17G198800.m1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
musac_pan_p039381 orthology 1 2 - -
soybn_pan_p040059 ultra-paralogy 0.231 0 - -
vitvi_pan_p041887 orthology 1 1 - -