Gene thecc_pan_p011391
| Sequence ID | thecc_pan_p011391 add to my list |
|---|---|
| Species | Theobroma cacao |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 486aa |
Length: 486 amino acids
>thecc_pan_p011391_THECC MGFLDMFVVALMPVLKVLLVTAVGLLLAMEKIDLLGPEARNYLNKIVFYVLSPSLLVSNL ADTITYNSVVTLWFMPLNILLTFIIGSALGLVLIKVTKTPEHLRGIVIGCCSAGNLGNLL LILVPAVCEQSNSPFGDSSTCSTNAVAYASLSMAVAAIYTWSYSYAVVSAYAIKSPEHKS THSSEEAPDPSSDSCTEALLPSSYSQISEESSVQVELPLTNSGERTKVLVKPCFIAVYAS FAESLISLVFMCLDLSASMRNPVFAFRKPFVNLHKMSFWKNIVQCVKSIMSKIDLKMVFA PSTIAAIIGFIFGIVSPIRKVLIDDSAPLHVIYTSAAFIGEAAIPCMTLIMGANLLKGCY KLVLAGLKRSEVNLLVIIGVVAVRNIFLPLLGIGVTKAAYHFGMAGSDSLYQFVLMLQYA VPPAFNVGMISLYHILYMHTYYQRQSVMTQLFQRGQGETSIIMLWTYAVASISLTLWSTL FMSLVA
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463693 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for thecc_pan_p011391
Represented sequence(s):
THECC_Criollo_v2.0
THECC_Matina1_6_v1.1