Gene tritu_pan_p008561


Sequence ID tritu_pan_p008561  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 140aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 140 amino acids

>tritu_pan_p008561_TRITU
MGEENAASANSVTVNVRVYMHCDACERSVRRTIKKIDGVETVEVDREENKVMVTGDFKAE
KVLRKLKKKTGKKAEILPPDPEEENQEEEKQEPDDDAYAPYGYGRPAPDMDAVLGNEFQR
PPRWDLHYFDDENTEASRIM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2
Heavy metal transport/detoxification group1
GP015397		 Heavy metal transport/detoxification group1
3 GP040065 Unannotated cluster
4 GP489053 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p008561



Represented sequence(s):
TRITU_Svevo_v2.0
TRIDC2Av2G208190.2
TRITU_Zavitan_v1.1
TraesCS2A02G356600.1
TraesCS2D02G355500.1
Download sequences FASTA

  1. 2. 3.
1. TRIDC2Av2G208190.2 0.00 5.89 8.98
2. TraesCS2A02G356600.1 5.89 0.00 3.64
3. TraesCS2D02G355500.1 8.98 3.64 0.00


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU2Hr1G086800.3 orthology 0.111 1 - -
tritu_pan_p034417 ultra-paralogy 0.0617 0 - -