Gene tritu_pan_p009091


Sequence ID tritu_pan_p009091  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 307aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 307 amino acids

>tritu_pan_p009091_TRITU
MASLLLKGVHKRLGLPSISISCSSAEATNIIASTTTTNGVGSSSGRALDRHSPRLRDPHR
SSTSKPPRPSTSASAKDSASSGDSKQQRGHGNNKKKKNKSTTAPAGTKSSEKRLVSPATS
SRFLLNSSRLQSDDLDVLALAPPPPPSFIDVFPGGEGKPPSFIDAFPPGNASLPLSFAKE
APSPVQQAETSSSSSSASSSSEITALQEEEEQQKAAVLARSSTTTERRTTQVVVLRVSLH
CKGCAGKVKKHLAKMEGVTSFDIDIPSKKVTVVGDVTPLGVLTSVSKVKPAQFWPSPPQP
PRASASF



Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p009091



Represented sequence(s):
TRITU_Svevo_v2.0
TRITU_Zavitan_v1.1



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU3Hr1G114920.1 orthology 0.106 1 294 9.89e-99
tritu_pan_p000519 ultra-paralogy 0.047 0 - -
tritu_pan_p040818 ultra-paralogy 0.0487 0 - -
tritu_pan_p052444 ultra-paralogy 0.126 0 - -