Gene tritu_pan_p009091
Sequence ID | tritu_pan_p009091 add to my list | ||
---|---|---|---|
Species | Triticum turgidum | ||
Alias | No gene alias | ||
Pangenome status | Core (2/2) | ||
Length | 307aa | ||
Gene Ontology |
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Length: 307 amino acids
>tritu_pan_p009091_TRITU MASLLLKGVHKRLGLPSISISCSSAEATNIIASTTTTNGVGSSSGRALDRHSPRLRDPHR SSTSKPPRPSTSASAKDSASSGDSKQQRGHGNNKKKKNKSTTAPAGTKSSEKRLVSPATS SRFLLNSSRLQSDDLDVLALAPPPPPSFIDVFPGGEGKPPSFIDAFPPGNASLPLSFAKE APSPVQQAETSSSSSSASSSSEITALQEEEEQQKAAVLARSSTTTERRTTQVVVLRVSLH CKGCAGKVKKHLAKMEGVTSFDIDIPSKKVTVVGDVTPLGVLTSVSKVKPAQFWPSPPQP PRASASF
Multiple alignment used to build consensus sequence:
Clustering Level | Family ID | Family Name |
---|---|---|
1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
2 | GP015837 | Unannotated cluster |
3 | GP040905 | Unannotated cluster |
4 | GP070656 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
ID | Name | Type |
---|---|---|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for tritu_pan_p009091
Represented sequence(s):
TRITU_Svevo_v2.0
TRITU_Zavitan_v1.1
Homology | RBH | ||||
---|---|---|---|---|---|
Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
HORVU3Hr1G114920.1 | orthology | 0.106 | 1 | 294 | 9.89e-99 |
tritu_pan_p000519 | ultra-paralogy | 0.047 | 0 | - | - |
tritu_pan_p040818 | ultra-paralogy | 0.0487 | 0 | - | - |
tritu_pan_p052444 | ultra-paralogy | 0.126 | 0 | - | - |