Gene tritu_pan_p012024


Sequence ID tritu_pan_p012024  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 412aa



Length: 412 amino acids

>tritu_pan_p012024_TRITU
MRFWSLLAVAWLPVLQVLLAGGLGACLASSRFDVLTSDARRHINKVVYIVFVPSLVFSSL
AGTVTLKDIISWWFMPVNMGIIFLIGAALGWLAVKALKPGAHLQGLVIACSSAGNWGTIP
LMIVPAICNEEDSPFGDADTCKSLGLSYVSLSMALGNFFIWTHSYSVMKRSAQLYKKCGD
PTTNMRKEEDSGEAENGNHAAFLPLSSGEFHEDVESDPVRSSLPSSDVAGSFLHYLRRAK
DLLVEILNELWSPPSVAALVGFTVGAIDKLRPLITEEDGPLRVVQDTAKLLADAAIPCTV
LILGGNLTKGRGRTTMKPLVVVSIIVIRFVILPACGIGVVKAASELGFLPRSPLYRYVLL
LQSTLPPAMSIGTIAQLFDVGEEECSIVFLWTHLVAALALTLWSTVFMSLVS


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463648 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for tritu_pan_p012024



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS4B02G322800.1
TraesCS5A02G494900.1
TRITU_Svevo_v2.0
TRIDC4Bv2G171720.1
Download sequences FASTA

  1. 2. 3.
1. TRIDC4Bv2G171720.1 0.00 7.84 0.73
2. TraesCS5A02G494900.1 7.84 0.00 7.58
3. TraesCS4B02G322800.1 0.73 7.58 0.00