Gene tritu_pan_p012462


Sequence ID tritu_pan_p012462  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 413aa



Length: 413 amino acids

>tritu_pan_p012462_TRITU
MGFVSLLAVASTPVVEVLLVALLGAYLASPRCGLLAPSARADINRVVYAVFTPALLLASL
ASTVTLQDALSWWFMPVNIGIIFFAGGVLGWLAVLILRPPPHLRGLVVASCSAANFGNLL
LIVIPAVCREDGNPFGGDCTSRGLSYASFSMALGGLYIWTHTHGVMKRSSEVRRRMVADQ
KAAAAEAHDHNKNVRPGEKGTEEEDEPSWNDGDGEEDGLSPLPSSSSNQHHTVVWAKLKQ
GAHQIVDELMAPPTVGAVLGFTVGTVPWLRSAFIGDSAPLRVVQDSLKLLGDGTIPCVIL
ILGGNLTKGLRKTTMSRWVITAIVCVRYVILPVVGVAVVRTARELGFLPPDPLYQYVLML
QFALPPAMSIGTMAQLYDVAQEECSVVFLWTYLVAALALTAWSTVFMSILAPA


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463648 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for tritu_pan_p012462



Represented sequence(s):
TRITU_Svevo_v2.0
TRIDC6Bv2G218170.2
TRIDC6Av2G201910.1
TRITU_Zavitan_v1.1
TraesCS6A02G421200.1
TraesCS6D02G404400.1
Download sequences FASTA

  1. 2. 3. 4.
1. TRIDC6Bv2G218170.2 0.00 13.58 9.46 7.16
2. TRIDC6Av2G201910.1 13.58 0.00 12.82 7.34
3. TraesCS6D02G404400.1 9.46 12.82 0.00 5.87
4. TraesCS6A02G421200.1 7.16 7.34 5.87 0.00