Gene tritu_pan_p014010


Sequence ID tritu_pan_p014010  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Core (2/2)
Length 398aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 398 amino acids

>tritu_pan_p014010_TRITU
MLFSHALPQDQTLPLCSVLPPFCSPCLLVPPFFTPLLTCTNTDKHSHFPVTSLRSPHSPA
MAAAEEGAQPLMYQTVALKVSIHCEGCKKKVKKVLHAIEGVYKTDIDTQQHKVVIVGNVS
VDALVKKLIKTGKHAEPWPEPLPPPSDANPPASGGGGGGKKKKKKKNKNKTAEPAAPGAP
TAEGAGGSVPPENHDHAGTCDEASGDEQPHQVEGGDPPKNPGAGDPHDGRAGMVAPFAMT
PQGMQPMGPSANASGGGGGGKKKKKGKGGNNGNVNANGGGGAGAAAQISPQDAPANPATG
NASQNPPAVVDAGPYPPATAMSYPGYYGSGAGAGHMPPPYAMSYSTSHPHRSSAYYHPMA
GAAYTGGAGYYYSTAPVSAAPGSYYMFSEENANACSVM


Multiple alignment used to build consensus sequence:



Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p014010



Represented sequence(s):
TRITU_Svevo_v2.0
TRIDC1Av2G031690.1
TRITU_Zavitan_v1.1
TraesCS1A02G091600.1
Download sequences FASTA



Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU1Hr1G021620.2 orthology 0.0984 1 - -
cocnu_pan_p024954 orthology 0.893 2 - -
tritu_pan_p011605 ultra-paralogy 0.0457 0 - -