Gene tritu_pan_p022331
| Sequence ID | tritu_pan_p022331 add to my list |
|---|---|
| Species | Triticum turgidum |
| Alias | No gene alias |
| Pangenome status | Core (2/2) |
| Length | 409aa |
Length: 409 amino acids
>tritu_pan_p022331_TRITU MMEMSLMEAMVSGGTGESILTSMKFAVLPIAKVFTLCFMGFLMATRYIGILDANGRKLLN GLVFSLLLPCLIFTQLGRAITVQKLLDWWYIPLNIVLGTVSGSLVGLLVAFIVQPPRPYF KFTVVHIAIGNNGNMPLVLIAALCRDPSNPFGDPEKCRQDGNAYVSFGQWVGAIILYSYV FQMLAPPPGETFDGSRVEKPPPPALAAAPEQVPLLTSRASEQAPKCSKALQILHIFVQKF KLKRVFQPPVIASALGISIGATPSLKHLVLTNHAPLFFFTDACIILGGAMIPCILLALGG NLVDGPSAGSKKLGLRTTAAIIIGRLVLVPPAGMCMVALADRLGFIPRGDTMFKFVLLLQ HSMPTSVLSGAVANLRGCGEESAAVLFWMYVCAVFSVAGWMVLYIRMLF
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132349 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for tritu_pan_p022331
Represented sequence(s):
TRITU_Zavitan_v1.1
TRITU_Svevo_v2.0
| 1. | 2. | 3. | 4. | 5. | |
|---|---|---|---|---|---|
| 1. TRIDC4Bv2G101110.2 | 0.00 | 5.94 | 1.50 | 0.74 | 3.82 |
| 2. TRIDC4Av2G069980.1 | 5.94 | 0.00 | 5.44 | 5.66 | 4.63 |
| 3. TraesCS4D02G174100.2 | 1.50 | 5.44 | 0.00 | 1.50 | 3.33 |
| 4. TraesCS4B02G172100.1 | 0.74 | 5.66 | 1.50 | 0.00 | 3.30 |
| 5. TraesCS4A02G132600.1 | 3.82 | 4.63 | 3.33 | 3.30 | 0.00 |