Gene tritu_pan_p040818


Sequence ID tritu_pan_p040818  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 303aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 303 amino acids

>tritu_pan_p040818_TRITU
MASLLLKGMHKRLGLPSITISCSSAAATNIIASTTTSNGVGSSSGRAIDRHSPRLRDPHR
SSTSKPPRPSTSTSTKDSASSGDSKQQHGHGNKKKKKSTTAAAGTKSSEKRLVSPATSSR
FLLNSSRLQSDDLDVLALSPPPPPSFIDVFPGGEAKPPSFIDAFPGDASLPLSFAKEAPS
PLQQAETSSSSSSASSSSEITAVQEEEQQKAVVLARSSTTTERRTTQVVVLRVSLHCKGC
AGKVKKHIAKMEGVTSFDIDIPSKKVTVVGDVTPLGVLTSVSKVKPAQFWPSPPRPPRAS
ASF




Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323		 Heavy metal transport/detoxification protein superfamily
2 GP015837 Unannotated cluster
3 GP040905 Unannotated cluster
4 GP070656 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121 		Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163 		Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p040818



Represented sequence(s):
TRITU_Zavitan_v1.1
TraesCS3D02G531500.1
Unrepresented genome(s):
TRITU_Svevo_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
HORVU3Hr1G114920.1 orthology 0.102 1 - -
tritu_pan_p000519 ultra-paralogy 0.043 0 - -
tritu_pan_p009091 ultra-paralogy 0.0487 0 - -
tritu_pan_p052444 ultra-paralogy 0.122 0 - -