Gene tritu_pan_p045822


Sequence ID tritu_pan_p045822  add to my list
Species Triticum turgidum
Alias No gene alias
Pangenome status Dispensable (1/2)
Length 307aa
Gene Ontology
Open Display term(s) (1)
biological_process
metal ion transport
GO:0030001 - metal ion transport



Length: 307 amino acids

>tritu_pan_p045822_TRITU
MATEPLQCKTLVLRVSIHCEGCKKKVKKVLQGVDGVYRCDIDARSNKVTVAVTGNVSADA
LLKRLRRSGKHAQQWPEQQQQQLAVGTQRPGETKNDAIQPDKPGGTGTAHKPASGDAATS
AAEQSNSKATPEEDPNKVARETVKPAQDDTESTNTDADADDAVSHRSKEPTAEQCNGTQR
KRKQLRQEEKPVDAIATVAVAAASDQGSHTCHSPPHLQQQQQPPPVHVLSYTMVRPSASA
AYYAAAPATAAPGARSLPPQELPYTYPPCCHYSQPSPWAPQIGAASPARYSYADIFSDDN
ANSCSVM





Clustering Level Family ID Family Name
1
Heavy metal transport/detoxification protein superfamily
GP000323
Heavy metal transport/detoxification protein superfamily
2 GP023608 Unannotated cluster
3 GP040483 Unannotated cluster
4 GP070015 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Heavy metal-associated domain, HMA
IPR006121
Heavy metal-associated domain, HMA Domain
Heavy metal-associated domain superfamily
IPR036163
Heavy metal-associated domain superfamily Homologous_superfamily

IPR006121 IPR036163
Figure 1: IPR domains for tritu_pan_p045822



Represented sequence(s):
TRITU_Zavitan_v1.1
Unrepresented genome(s):
TRITU_Svevo_v2.0


Homology RBH
Similar Sequence ID Type Evolutionary distance Node distance score e-value
AUR62008611-RA orthology 1 3 - -
Bv7_164120_fciq.t1 orthology 1 3 - -
evm_27.model.AmTr_v1.0_scaffold00016.303 orthology 1 1 - -