Gene vitvi_pan_p001536


Sequence ID vitvi_pan_p001536  add to my list
Species Vitis vinifera
Alias No gene alias
Pangenome status Specific (1/3)
Length 407aa



Length: 407 amino acids

>vitvi_pan_p001536_VITVI
MGLLDLFFVASMPVIKVLLVTAVGSFIALDRFDIFGENVRKQLNTIVFFVLNPALVCINL
ANTVTFESVVLLWFMPFNILITFVIGSALGWLLVKLTRAPQHLRGLVLGCCAAAGNLGNL
PLIIVPAVCREKGSPFGAPDVCHTYGMAYASLSMAIGAIYLWSYVYNIVRVSSVGTTEVI
NIEDDSPAKMREPLLDSKDCSISVDYADQLTLPYTQSEENLKVTTADKVKRFLRMLSREI
NIQALLAPSTTGAILGFIIGMVPQLRKLLIGSTAPLRVLQDSTSMLGDAAIPALTLIMGG
NLLKGLKGSGIRASLLIGIIVVRYIFLPLLGIAIVKGAVQLGLVNPDPLYQFVLLLQYAL
PPAMNIGTITQLFGAGESECSVIMLWTYALASVALTLWSTLFMWLVA




Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463693 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for vitvi_pan_p001536



Represented sequence(s):
VITVI_CabernetSauvignon_v1.0
VvCabSauv08_P0004F.ver1.0.g294710.m01
VvCabSauv08_H0004F_051.ver1.0.g045740.m01
VvCabSauv08_H0004F_051.ver1.0.g045740.m02
VvCabSauv08_H0004F_051.ver1.0.g045740.m03
VvCabSauv08_H0004F_051.ver1.0.g045740.m04
VvCabSauv08_H0004F_051.ver1.0.g045740.m05
VvCabSauv08_H0004F_051.ver1.0.g045740.m06
VvCabSauv08_H0004F_051.ver1.0.g045740.m07
VvCabSauv08_H0004F_051.ver1.0.g045740.m08
VvCabSauv08_P0004F.ver1.0.g294710.m02
VvCabSauv08_P0004F.ver1.0.g294710.m03
VvCabSauv08_P0004F.ver1.0.g294710.m04
VvCabSauv08_P0004F.ver1.0.g294710.m05
VvCabSauv08_P0004F.ver1.0.g294710.m06
VvCabSauv08_P0004F.ver1.0.g294710.m07
VvCabSauv08_P0004F.ver1.0.g294710.m08
VvCabSauv08_P0004F.ver1.0.g294710.m09
VvCabSauv08_P0004F.ver1.0.g294710.m10
Unrepresented genome(s):
VITVI_12X.2
VITVI_Carmenere_v1.0
Download sequences FASTA

  1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18.
1. VvCabSauv08_H0004F_051.ver1.0.g045740.m03 0.00 -0.00 7.73 7.75 -0.00 0.25 -0.00 0.25 15.43 15.43 15.78 15.78 15.48 15.83 15.83 7.38 7.70 7.72
2. VvCabSauv08_H0004F_051.ver1.0.g045740.m06 -0.00 0.00 7.75 7.75 -0.00 0.25 -0.00 0.25 15.48 15.48 15.83 15.83 15.48 15.83 15.83 7.40 7.72 7.72
3. VvCabSauv08_P0004F.ver1.0.g294710.m06 7.73 7.75 0.00 -0.00 7.79 7.52 7.81 7.54 15.78 15.78 15.43 15.43 15.83 15.48 15.48 7.70 7.38 7.40
4. VvCabSauv08_P0004F.ver1.0.g294710.m04 7.75 7.75 -0.00 0.00 7.81 7.54 7.81 7.54 15.83 15.83 15.48 15.48 15.83 15.48 15.48 7.72 7.40 7.40
5. VvCabSauv08_H0004F_051.ver1.0.g045740.m02 -0.00 -0.00 7.79 7.81 0.00 0.25 -0.00 0.25 15.43 15.43 15.78 15.78 15.48 15.83 15.83 7.38 7.70 7.72
6. VvCabSauv08_P0004F.ver1.0.g294710.m01 0.25 0.25 7.52 7.54 0.25 0.00 0.25 -0.00 15.78 15.78 15.43 15.43 15.83 15.48 15.48 7.70 7.38 7.40
7. VvCabSauv08_H0004F_051.ver1.0.g045740.m01 -0.00 -0.00 7.81 7.81 -0.00 0.25 0.00 0.25 15.48 15.48 15.83 15.83 15.48 15.83 15.83 7.40 7.72 7.72
8. VvCabSauv08_P0004F.ver1.0.g294710.m02 0.25 0.25 7.54 7.54 0.25 -0.00 0.25 0.00 15.83 15.83 15.48 15.48 15.83 15.48 15.48 7.72 7.40 7.40
9. VvCabSauv08_H0004F_051.ver1.0.g045740.m04 15.43 15.48 15.78 15.83 15.43 15.78 15.48 15.83 0.00 -0.00 0.57 0.57 -0.00 0.57 0.57 13.32 13.66 13.70
10. VvCabSauv08_H0004F_051.ver1.0.g045740.m08 15.43 15.48 15.78 15.83 15.43 15.78 15.48 15.83 -0.00 0.00 0.57 0.57 -0.00 0.57 0.57 13.32 13.66 13.70
11. VvCabSauv08_P0004F.ver1.0.g294710.m08 15.78 15.83 15.43 15.48 15.78 15.43 15.83 15.48 0.57 0.57 0.00 -0.00 0.57 -0.00 -0.00 13.66 13.32 13.36
12. VvCabSauv08_P0004F.ver1.0.g294710.m10 15.78 15.83 15.43 15.48 15.78 15.43 15.83 15.48 0.57 0.57 -0.00 0.00 0.57 -0.00 -0.00 13.66 13.32 13.36
13. VvCabSauv08_H0004F_051.ver1.0.g045740.m07 15.48 15.48 15.83 15.83 15.48 15.83 15.48 15.83 -0.00 -0.00 0.57 0.57 0.00 0.57 0.57 13.36 13.70 13.70
14. VvCabSauv08_P0004F.ver1.0.g294710.m03 15.83 15.83 15.48 15.48 15.83 15.48 15.83 15.48 0.57 0.57 -0.00 -0.00 0.57 0.00 -0.00 13.70 13.36 13.36
15. VvCabSauv08_P0004F.ver1.0.g294710.m09 15.83 15.83 15.48 15.48 15.83 15.48 15.83 15.48 0.57 0.57 -0.00 -0.00 0.57 -0.00 0.00 13.70 13.36 13.36
16. VvCabSauv08_H0004F_051.ver1.0.g045740.m05 7.38 7.40 7.70 7.72 7.38 7.70 7.40 7.72 13.32 13.32 13.66 13.66 13.36 13.70 13.70 0.00 0.29 0.29
17. VvCabSauv08_P0004F.ver1.0.g294710.m07 7.70 7.72 7.38 7.40 7.70 7.38 7.72 7.40 13.66 13.66 13.32 13.32 13.70 13.36 13.36 0.29 0.00 -0.00
18. VvCabSauv08_P0004F.ver1.0.g294710.m05 7.72 7.72 7.40 7.40 7.72 7.40 7.72 7.40 13.70 13.70 13.36 13.36 13.70 13.36 13.36 0.29 -0.00 0.00