Gene vitvi_pan_p004474
| Sequence ID | vitvi_pan_p004474 add to my list |
|---|---|
| Species | Vitis vinifera |
| Alias | No gene alias |
| Pangenome status | Specific (1/3) |
| Length | 382aa |
Length: 382 amino acids
>vitvi_pan_p004474_VITVI MGFWTLFEVASMPILQVLIIGSVGAFLATGYCNILPADARKSVNKIVFVAFTPSLMFAGL AQTVTLQDMISWWFMPVNIGLTFLFGGILGWLVVKILKPKQHLEGLIMATCSSGNLGNLL LIVIPAICEEDGSPFGDHASCGASGLSYASLSTALGGIFIWTYTYQLIRSSVTKYYAIQD VKDVIKVPNKELDANKETHLLKGEDQEHGTSSFPPSNSTGEDVEKQVIVSQESAGSLEDG KESFWARVAGIASQMMKELLSPPTLGAILGFVFGAVPWLKNFLTGDEAPLRVVQDSVKLL ANGTIPCITLILGGNLTRGLRSSGIKPSIIIAVICVRYFILPLIGIAVVKAASNLGFVLS DPLYLYVLMIQFTLPPAMNIGK
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP463648 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for vitvi_pan_p004474
Represented sequence(s):
Unrepresented genome(s):
VITVI_CabernetSauvignon_v1.0
VITVI_12X.2
VITVI_Carmenere_v1.0
| 1. | 2. | 3. | 4. | 5. | 6. | 7. | 8. | 9. | 10. | 11. | 12. | 13. | 14. | 15. | 16. | 17. | 18. | 19. | 20. | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. VvCabSauv08_H0041F_013.ver1.0.g145700.m04 | 0.00 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 2. VvCabSauv08_H0041F_013.ver1.0.g145700.m09 | -0.00 | 0.00 | -0.00 | -0.00 | -0.00 | -0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 3. VvCabSauv08_H0041F_013.ver1.0.g145700.m10 | -0.00 | -0.00 | 0.00 | -0.00 | -0.00 | -0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 4. VvCabSauv08_P0041F.ver1.0.g411490.m05 | -0.00 | -0.00 | -0.00 | 0.00 | -0.00 | -0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 5. VvCabSauv08_P0041F.ver1.0.g411490.m09 | -0.00 | -0.00 | -0.00 | -0.00 | 0.00 | -0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 6. VvCabSauv08_P0041F.ver1.0.g411490.m10 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | 0.00 | 0.26 | 0.26 | 1.41 | 1.41 | -0.00 | -0.00 | 6.25 | 6.02 | 4.79 | 4.79 | 8.57 | 8.57 | 5.39 | 5.39 |
| 7. VvCabSauv08_H0041F_013.ver1.0.g145700.m03 | 0.26 | 0.26 | 0.26 | 0.26 | 0.26 | 0.26 | 0.00 | -0.00 | 1.91 | 1.91 | 0.33 | 0.33 | 3.33 | 5.15 | 4.18 | 4.18 | 8.57 | 8.57 | 5.39 | 5.39 |
| 8. VvCabSauv08_P0041F.ver1.0.g411490.m03 | 0.26 | 0.26 | 0.26 | 0.26 | 0.26 | 0.26 | -0.00 | 0.00 | 1.91 | 1.91 | 0.33 | 0.33 | 3.33 | 5.15 | 4.18 | 4.18 | 8.57 | 8.57 | 5.39 | 5.39 |
| 9. VvCabSauv08_H0041F_013.ver1.0.g145700.m08 | 1.41 | 1.41 | 1.41 | 1.41 | 1.41 | 1.41 | 1.91 | 1.91 | 0.00 | -0.00 | -0.00 | -0.00 | 9.66 | 9.41 | 8.12 | 8.12 | 13.59 | 13.59 | 10.32 | 10.32 |
| 10. VvCabSauv08_P0041F.ver1.0.g411490.m08 | 1.41 | 1.41 | 1.41 | 1.41 | 1.41 | 1.41 | 1.91 | 1.91 | -0.00 | 0.00 | -0.00 | -0.00 | 9.66 | 9.41 | 8.12 | 8.12 | 13.59 | 13.59 | 10.32 | 10.32 |
| 11. VvCabSauv08_H0041F_013.ver1.0.g145700.m07 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | 0.33 | 0.33 | -0.00 | -0.00 | 0.00 | -0.00 | 8.02 | 7.74 | 6.28 | 6.28 | 11.64 | 11.64 | 7.78 | 7.78 |
| 12. VvCabSauv08_P0041F.ver1.0.g411490.m04 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | -0.00 | 0.33 | 0.33 | -0.00 | -0.00 | -0.00 | 0.00 | 8.02 | 7.74 | 6.28 | 6.28 | 11.64 | 11.64 | 7.78 | 7.78 |
| 13. VvCabSauv08_P0041F.ver1.0.g411490.m06 | 6.25 | 6.25 | 6.25 | 6.25 | 6.25 | 6.25 | 3.33 | 3.33 | 9.66 | 9.66 | 8.02 | 8.02 | 0.00 | 3.90 | 3.84 | 3.84 | 8.57 | 8.57 | 5.82 | 5.82 |
| 14. VvCabSauv08_H0041F_013.ver1.0.g145700.m05 | 6.02 | 6.02 | 6.02 | 6.02 | 6.02 | 6.02 | 5.15 | 5.15 | 9.41 | 9.41 | 7.74 | 7.74 | 3.90 | 0.00 | 4.18 | 4.18 | 8.57 | 8.57 | 6.25 | 6.25 |
| 15. VvCabSauv08_H0041F_013.ver1.0.g145700.m06 | 4.79 | 4.79 | 4.79 | 4.79 | 4.79 | 4.79 | 4.18 | 4.18 | 8.12 | 8.12 | 6.28 | 6.28 | 3.84 | 4.18 | 0.00 | -0.00 | 8.57 | 8.57 | 6.25 | 6.25 |
| 16. VvCabSauv08_P0041F.ver1.0.g411490.m07 | 4.79 | 4.79 | 4.79 | 4.79 | 4.79 | 4.79 | 4.18 | 4.18 | 8.12 | 8.12 | 6.28 | 6.28 | 3.84 | 4.18 | -0.00 | 0.00 | 8.57 | 8.57 | 6.25 | 6.25 |
| 17. VvCabSauv08_H0041F_013.ver1.0.g145700.m02 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 13.59 | 13.59 | 11.64 | 11.64 | 8.57 | 8.57 | 8.57 | 8.57 | 0.00 | -0.00 | 2.61 | 2.61 |
| 18. VvCabSauv08_P0041F.ver1.0.g411490.m02 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 8.57 | 13.59 | 13.59 | 11.64 | 11.64 | 8.57 | 8.57 | 8.57 | 8.57 | -0.00 | 0.00 | 2.61 | 2.61 |
| 19. VvCabSauv08_H0041F_013.ver1.0.g145700.m01 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 10.32 | 10.32 | 7.78 | 7.78 | 5.82 | 6.25 | 6.25 | 6.25 | 2.61 | 2.61 | 0.00 | -0.00 |
| 20. VvCabSauv08_P0041F.ver1.0.g411490.m01 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 5.39 | 10.32 | 10.32 | 7.78 | 7.78 | 5.82 | 6.25 | 6.25 | 6.25 | 2.61 | 2.61 | -0.00 | 0.00 |