Gene vitvi_pan_p012342


Sequence ID vitvi_pan_p012342  add to my list
Species Vitis vinifera
Alias No gene alias
Pangenome status Specific (1/3)
Length 303aa



Length: 303 amino acids

>vitvi_pan_p012342_VITVI
MGNLFFIIIPAICEESDNPFGSSDCSTDGDAYASLSSALGAIGVWTYVYMIMRMSATKCK
GEINLCNSTTSVRTSREALEISSDCCTEALLPPRDSPRSGNWSDEEELPHDGSEEKSEVP
FSEKIKQKVKIFMEKTNFKQVFTPSTIGVIFGFFIGLIPPIRKLIIGDSAPLRVIESSAT
LLGEAAIPSTTLIMGANLLSGLKGSDVSIVVILGIVAVRYIFLPLLGVVVVKAATHFGLV
GSNLLFQFVLMLQYAVPPAMGTGVICQLFQFGQSECSVIMLWTYAVAGFALTLWSTFFMW
LVS




Clustering Level Family ID Family Name
1
Auxin efflux carrier family
GP000355		 Auxin efflux carrier family
2 GP015273 Unannotated cluster
3 GP040583 Unannotated cluster
4 GP463648 Unannotated cluster
Table 1: This table displays which families the selected sequence belongs to in GreenPhyl clustering ?.


ID Name Type
Membrane transport protein
IPR004776 		Membrane transport protein Family

IPR004776
Figure 1: IPR domains for vitvi_pan_p012342



Represented sequence(s):
VITVI_CabernetSauvignon_v1.0
VvCabSauv08_P0004F.ver1.0.g294680.m06
VvCabSauv08_H0004F_051.ver1.0.g045720.m01
VvCabSauv08_H0004F_051.ver1.0.g045720.m02
VvCabSauv08_H0004F_051.ver1.0.g045720.m03
VvCabSauv08_H0004F_051.ver1.0.g045720.m04
VvCabSauv08_H0004F_051.ver1.0.g045720.m05
VvCabSauv08_H0004F_051.ver1.0.g045720.m08
VvCabSauv08_H0004F_051.ver1.0.g045720.m06
VvCabSauv08_H0004F_051.ver1.0.g045720.m07
VvCabSauv08_H0004F_051.ver1.0.g045720.m09
VvCabSauv08_H0004F_051.ver1.0.g045720.m10
VvCabSauv08_H0004F_051.ver1.0.g045720.m11
VvCabSauv08_P0004F.ver1.0.g294680.m01
VvCabSauv08_P0004F.ver1.0.g294680.m02
VvCabSauv08_P0004F.ver1.0.g294680.m03
VvCabSauv08_P0004F.ver1.0.g294680.m04
VvCabSauv08_P0004F.ver1.0.g294680.m05
VvCabSauv08_P0004F.ver1.0.g294680.m07
VvCabSauv08_P0004F.ver1.0.g294680.m08
VvCabSauv08_P0004F.ver1.0.g294680.m09
VvCabSauv08_P0004F.ver1.0.g294680.m10
VvCabSauv08_P0004F.ver1.0.g294680.m11
VvCabSauv08_P0004F.ver1.0.g294680.m12
VvCabSauv08_P0004F.ver1.0.g294680.m13
VvCabSauv08_P0004F.ver1.0.g294680.m14
Unrepresented genome(s):
VITVI_12X.2
VITVI_Carmenere_v1.0
Download sequences FASTA

  1. 2. 3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16. 17. 18. 19. 20. 21. 22. 23. 24. 25.
1. VvCabSauv08_H0004F_051.ver1.0.g045720.m05 0.00 0.24 0.24 0.24 1.05 1.05 1.32 1.32 1.59 1.59 1.59 1.06 1.33 1.33 0.93 0.93 0.93 0.98 1.65 1.30 1.65 -0.00 8.27 0.33 8.63
2. VvCabSauv08_P0004F.ver1.0.g294680.m03 0.24 0.00 -0.00 -0.00 1.05 1.05 1.59 1.59 1.32 1.32 1.32 1.33 1.06 1.06 0.93 0.93 0.93 1.30 1.65 0.98 1.65 0.33 8.63 -0.00 8.27
3. VvCabSauv08_P0004F.ver1.0.g294680.m04 0.24 -0.00 0.00 -0.00 1.05 1.05 1.59 1.59 1.32 1.32 1.32 1.33 1.06 1.06 0.93 0.93 0.93 1.30 1.65 0.98 1.65 0.33 8.63 -0.00 8.27
4. VvCabSauv08_P0004F.ver1.0.g294680.m09 0.24 -0.00 -0.00 0.00 1.05 1.05 1.59 1.59 1.32 1.32 1.32 1.33 1.06 1.06 0.93 0.93 0.93 1.30 1.65 0.98 1.65 0.33 8.63 -0.00 8.27
5. VvCabSauv08_H0004F_051.ver1.0.g045720.m08 1.05 1.05 1.05 1.05 0.00 -0.00 2.64 2.64 2.64 2.64 2.64 2.36 2.36 2.36 0.93 0.93 0.93 2.59 1.65 2.59 1.65 1.50 11.07 1.50 11.07
6. VvCabSauv08_P0004F.ver1.0.g294680.m10 1.05 1.05 1.05 1.05 -0.00 0.00 2.64 2.64 2.64 2.64 2.64 2.36 2.36 2.36 0.93 0.93 0.93 2.59 1.65 2.59 1.65 1.50 11.07 1.50 11.07
7. VvCabSauv08_H0004F_051.ver1.0.g045720.m04 1.32 1.59 1.59 1.59 2.64 2.64 0.00 -0.00 0.26 0.26 0.26 0.80 1.07 1.07 2.84 2.84 2.84 0.98 3.81 1.30 3.81 -0.00 8.27 0.33 8.63
8. VvCabSauv08_H0004F_051.ver1.0.g045720.m10 1.32 1.59 1.59 1.59 2.64 2.64 -0.00 0.00 0.26 0.26 0.26 0.80 1.07 1.07 2.84 2.84 2.84 0.98 3.81 1.30 3.81 -0.00 8.27 0.33 8.63
9. VvCabSauv08_P0004F.ver1.0.g294680.m01 1.59 1.32 1.32 1.32 2.64 2.64 0.26 0.26 0.00 -0.00 -0.00 1.07 0.80 0.80 2.84 2.84 2.84 1.30 3.81 0.98 3.81 0.33 8.63 -0.00 8.27
10. VvCabSauv08_P0004F.ver1.0.g294680.m08 1.59 1.32 1.32 1.32 2.64 2.64 0.26 0.26 -0.00 0.00 -0.00 1.07 0.80 0.80 2.84 2.84 2.84 1.30 3.81 0.98 3.81 0.33 8.63 -0.00 8.27
11. VvCabSauv08_P0004F.ver1.0.g294680.m13 1.59 1.32 1.32 1.32 2.64 2.64 0.26 0.26 -0.00 -0.00 0.00 1.07 0.80 0.80 2.84 2.84 2.84 1.30 3.81 0.98 3.81 0.33 8.63 -0.00 8.27
12. VvCabSauv08_H0004F_051.ver1.0.g045720.m09 1.06 1.33 1.33 1.33 2.36 2.36 0.80 0.80 1.07 1.07 1.07 0.00 0.26 0.26 2.51 2.51 2.51 0.98 3.46 1.30 3.46 -0.00 8.27 0.33 8.63
13. VvCabSauv08_P0004F.ver1.0.g294680.m02 1.33 1.06 1.06 1.06 2.36 2.36 1.07 1.07 0.80 0.80 0.80 0.26 0.00 -0.00 2.51 2.51 2.51 1.30 3.46 0.98 3.46 0.33 8.63 -0.00 8.27
14. VvCabSauv08_P0004F.ver1.0.g294680.m07 1.33 1.06 1.06 1.06 2.36 2.36 1.07 1.07 0.80 0.80 0.80 0.26 -0.00 0.00 2.51 2.51 2.51 1.30 3.46 0.98 3.46 0.33 8.63 -0.00 8.27
15. VvCabSauv08_H0004F_051.ver1.0.g045720.m03 0.93 0.93 0.93 0.93 0.93 0.93 2.84 2.84 2.84 2.84 2.84 2.51 2.51 2.51 0.00 -0.00 -0.00 2.85 1.65 2.85 1.65 1.45 13.96 1.45 13.96
16. VvCabSauv08_H0004F_051.ver1.0.g045720.m06 0.93 0.93 0.93 0.93 0.93 0.93 2.84 2.84 2.84 2.84 2.84 2.51 2.51 2.51 -0.00 0.00 -0.00 2.85 1.65 2.85 1.65 1.45 13.96 1.45 13.96
17. VvCabSauv08_P0004F.ver1.0.g294680.m11 0.93 0.93 0.93 0.93 0.93 0.93 2.84 2.84 2.84 2.84 2.84 2.51 2.51 2.51 -0.00 -0.00 0.00 2.85 1.65 2.85 1.65 1.45 13.96 1.45 13.96
18. VvCabSauv08_H0004F_051.ver1.0.g045720.m01 0.98 1.30 1.30 1.30 2.59 2.59 0.98 0.98 1.30 1.30 1.30 0.98 1.30 1.30 2.85 2.85 2.85 0.00 4.17 0.32 4.17 -0.00 4.73 0.33 5.10
19. VvCabSauv08_H0004F_051.ver1.0.g045720.m07 1.65 1.65 1.65 1.65 1.65 1.65 3.81 3.81 3.81 3.81 3.81 3.46 3.46 3.46 1.65 1.65 1.65 4.17 0.00 4.17 -0.00 2.67 16.64 2.67 16.64
20. VvCabSauv08_P0004F.ver1.0.g294680.m05 1.30 0.98 0.98 0.98 2.59 2.59 1.30 1.30 0.98 0.98 0.98 1.30 0.98 0.98 2.85 2.85 2.85 0.32 4.17 0.00 4.17 0.33 5.10 -0.00 4.73
21. VvCabSauv08_P0004F.ver1.0.g294680.m12 1.65 1.65 1.65 1.65 1.65 1.65 3.81 3.81 3.81 3.81 3.81 3.46 3.46 3.46 1.65 1.65 1.65 4.17 -0.00 4.17 0.00 2.67 16.64 2.67 16.64
22. VvCabSauv08_H0004F_051.ver1.0.g045720.m02 -0.00 0.33 0.33 0.33 1.50 1.50 -0.00 -0.00 0.33 0.33 0.33 -0.00 0.33 0.33 1.45 1.45 1.45 -0.00 2.67 0.33 2.67 0.00 3.68 0.33 4.06
23. VvCabSauv08_H0004F_051.ver1.0.g045720.m11 8.27 8.63 8.63 8.63 11.07 11.07 8.27 8.27 8.63 8.63 8.63 8.27 8.63 8.63 13.96 13.96 13.96 4.73 16.64 5.10 16.64 3.68 0.00 4.06 0.33
24. VvCabSauv08_P0004F.ver1.0.g294680.m06 0.33 -0.00 -0.00 -0.00 1.50 1.50 0.33 0.33 -0.00 -0.00 -0.00 0.33 -0.00 -0.00 1.45 1.45 1.45 0.33 2.67 -0.00 2.67 0.33 4.06 0.00 3.68
25. VvCabSauv08_P0004F.ver1.0.g294680.m14 8.63 8.27 8.27 8.27 11.07 11.07 8.63 8.63 8.27 8.27 8.27 8.63 8.27 8.27 13.96 13.96 13.96 5.10 16.64 4.73 16.64 4.06 0.33 3.68 0.00