Gene vitvi_pan_p014910
| Sequence ID | vitvi_pan_p014910 add to my list | ||
|---|---|---|---|
| Species | Vitis vinifera | ||
| Alias | No gene alias | ||
| Pangenome status | Core (3/3) | ||
| Length | 94aa | ||
| Gene Ontology |
 Display term(s) (1)
|
Length: 94 amino acids
>vitvi_pan_p014910_VITVI METVELKVEMVGIHEKRLRKCLSKLKGIEKVEVDANSQKVVVTGYAHRNKILKAVKRGGL KVDFWSAQNELLTAYASASYASYGSLRFNNFNFF
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Heavy metal transport/detoxification protein superfamily
GP000323 |
Heavy metal transport/detoxification protein superfamily |
| 2 | Heavy metal transport/detoxification group1
GP015397 |
Heavy metal transport/detoxification group1 |
| 3 | GP040065 | Unannotated cluster |
| 4 | GP078604 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Heavy metal-associated domain, HMA
IPR006121
|
Heavy metal-associated domain, HMA | Domain |
|
Heavy metal-associated domain superfamily
IPR036163
|
Heavy metal-associated domain superfamily | Homologous_superfamily |
Figure 1: IPR domains for vitvi_pan_p014910
Represented sequence(s):
VITVI_12X.2
VITVI_Carmenere_v1.0
VITVI_CabernetSauvignon_v1.0
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. Vitvi18g02480.t01 | 0.00 | -0.00 | -0.00 | -0.00 |
| 2. VvCabSauv08_H0099F_003.ver1.0.g202630.m01 | -0.00 | 0.00 | -0.00 | -0.00 |
| 3. VvCabSauv08_P0099F.ver1.0.g489150.m01 | -0.00 | -0.00 | 0.00 | -0.00 |
| 4. VvCarFPS02VCR702_v1_Hc0024F_016.ver1_0.g474160.m01 | -0.00 | -0.00 | -0.00 | 0.00 |
| Homology | RBH | ||||
|---|---|---|---|---|---|
| Similar Sequence ID | Type | Evolutionary distance | Node distance | score | e-value |
| Ca_12_32.9 | orthology | 0.276 | 8 | - | - |
| Ca_3_262.11 | orthology | 0.276 | 8 | - | - |
| Ca_455_136.3 | orthology | 0.276 | 8 | - | - |
| Ca_68_16.11 | orthology | 0.299 | 8 | 134 | 2.34e-42 |
| Cc10_g00290 | orthology | 0.299 | 8 | 119 | 5.34e-37 |
| Cg3g025710.1 | orthology | 0.114 | 6 | 162 | 5.75e-54 |
| Cm122260.1 | orthology | 0.125 | 5 | 159 | 1.61e-52 |
| Cs3g27690.1 | orthology | 0.114 | 6 | 162 | 6.26e-54 |
| DCAR_023025 | orthology | 0.159 | 5 | 149 | 8.46e-49 |
| HORVU7Hr1G051110.3 | orthology | 0.883 | 10 | 84 | 8.27e-23 |
| MELO3C017056.2.1 | orthology | 0.259 | 6 | 141 | 1.16e-45 |
| Manes.05G127500.1 | orthology | 0.152 | 4 | 153 | 3.06e-50 |
| Manes.18G002200.1 | orthology | 0.165 | 4 | - | - |
| Mba08_g25790.1 | orthology | 0.506 | 8 | 123 | 2.08e-38 |
| ORGLA08G0178600.1 | orthology | 0.603 | 9 | 107 | 3.71e-32 |
| Oeu013567.1 | orthology | 0.18 | 6 | 134 | 8.19e-43 |
| Sspon.06G0001840-1A | orthology | 0.811 | 8 | - | - |
| Sspon.06G0001840-2C | orthology | 0.623 | 8 | - | - |
| Sspon.06G0001840-3D | orthology | 0.633 | 8 | 103 | 3.7e-30 |
| XP_010932092.1 | orthology | 0.313 | 7 | 134 | 8.48e-43 |
| XP_017697769.1 | orthology | 0.338 | 7 | 132 | 4.61e-42 |
| XP_019707878.1 | orthology | 0.35 | 8 | - | - |
| bradi_pan_p007471 | orthology | 0.614 | 9 | 115 | 5.7e-35 |
| cajca.ICPL87119.gnm1.ann1.C.cajan_11445.1 | orthology | 0.291 | 4 | - | - |
| cajca.ICPL87119.gnm1.ann1.C.cajan_22304.1 | orthology | 0.289 | 4 | 146 | 1.12e-47 |
| cajca.ICPL87119.gnm1.ann1.C.cajan_22894.1 | orthology | 0.287 | 3 | - | - |
| capan_pan_p037558 | orthology | 0.286 | 7 | 114 | 8.58e-35 |
| cicar_pan_p012771 | orthology | 0.409 | 5 | 139 | 1.43e-44 |
| cocnu_pan_p024788 | orthology | 0.313 | 7 | 130 | 1.74e-41 |
| cocnu_pan_p029661 | orthology | 0.376 | 8 | - | - |
| cucsa_pan_p017207 | orthology | 0.259 | 6 | 141 | 1.09e-45 |
| maize_pan_p023740 | orthology | 0.606 | 8 | 105 | 2.64e-31 |
| maldo_pan_p020708 | orthology | 0.149 | 4 | 149 | 1.54e-48 |
| medtr_pan_p031498 | orthology | 0.341 | 5 | 142 | 4.18e-46 |
| musac_pan_p036492 | orthology | 0.494 | 8 | 121 | 9.39e-38 |
| orysa_pan_p046260 | orthology | 0.579 | 9 | 110 | 4.89e-33 |
| phavu.G19833.gnm2.ann1.Phvul.002G208500.1 | orthology | 0.298 | 3 | 143 | 2.45e-46 |
| sorbi_pan_p020199 | orthology | 0.582 | 8 | 106 | 7.58e-32 |
| soybn_pan_p018879 | orthology | 0.341 | 3 | 145 | 6.05e-47 |
| soybn_pan_p037728 | orthology | 0.366 | 4 | - | - |
| soybn_pan_p037999 | orthology | 0.407 | 4 | - | - |
| soybn_pan_p041984 | orthology | 0.376 | 4 | - | - |
| thecc_pan_p004256 | orthology | 0.161 | 5 | 142 | 2.64e-46 |
| tritu_pan_p008810 | orthology | 0.619 | 10 | 109 | 8.16e-33 |
| vitvi_pan_p031077 | orthology | 0 | 1 | - | - |