Gene vitvi_pan_p021763
| Sequence ID | vitvi_pan_p021763 add to my list |
|---|---|
| Species | Vitis vinifera |
| Alias | No gene alias |
| Pangenome status | Core (3/3) |
| Length | 484aa |
Length: 484 amino acids
>vitvi_pan_p021763_VITVI MLKPCCILFDFGSVRHFPLSACFNSQILFLISKYLRKKEVFAPLYDSNMESSREDLVSAV VPLLKLLSLTVIGLVLAHPKTQMIPRSTFKLLSKLVFALFLPCLIFTNLGQFITLENFTF WWFVPVNVLVSTLIGCFLGYLVVIICRPPAQFNRFTIIMTGLGNTGNLPLAIVGSVCHTA NNPFGPDCYGKGVAYVSFAQWVAVILVYTFVYHMMEPPMNFYEIVDEGIEIGEPQLVNNI SRPLLVEAEWPGIEDKETEHSKTPFIAGVFNSISNLTMSDLDLVGETGNTRSESIRCFAE PKVVRRMRVVAEQTPIKHILQPPTIASLLAIIVGMVPQFKSFVFGHDAPLSFITDSLEIL AGAMVPSVMLVLGGMLAEGPNDSKLGLRTTIGISVARLLVLPLLGIGIVFLADKLNFLVH GDQMSIFVLLLQYTTPSAILLGAIASLRGYAVKEASALLFWQHVFALFSLSLYIVIYFKL LSYI
Multiple alignment used to build consensus sequence:
| Clustering Level | Family ID | Family Name |
|---|---|---|
| 1 | Auxin efflux carrier family
GP000355 |
Auxin efflux carrier family |
| 2 | GP015273 | Unannotated cluster |
| 3 | GP040583 | Unannotated cluster |
| 4 | GP132388 | Unannotated cluster |
Table 1:
This table displays which families the selected sequence belongs to in
GreenPhyl clustering
?.
| ID | Name | Type |
|---|---|---|
|
Membrane transport protein
IPR004776
|
Membrane transport protein | Family |
Figure 1: IPR domains for vitvi_pan_p021763
Represented sequence(s):
VITVI_12X.2
VITVI_Carmenere_v1.0
VITVI_CabernetSauvignon_v1.0
| 1. | 2. | 3. | 4. | |
|---|---|---|---|---|
| 1. Vitvi01g00386.t01 | 0.00 | -0.00 | -0.00 | -0.00 |
| 2. VvCabSauv08_P0000F.ver1.0.g261420.m02 | -0.00 | 0.00 | -0.00 | -0.00 |
| 3. VvCabSauv08_P0000F.ver1.0.g261420.m01 | -0.00 | -0.00 | 0.00 | -0.00 |
| 4. VvCarFPS02VCR702_v1_PsGc_75.ver1_0.g326550.m01 | -0.00 | -0.00 | -0.00 | 0.00 |