Sequence_id (like At1g14920)
Family_name (like GRAS)
Family_id (like 20939)
Alias (like GAI)
Annotation (like GRAS)
Interpro (like IPR005202)
UniProt (like Q9LQT8)
KEGG (like K00430)
EC number (like 3.4.11.18)
Home
Clustering list
Automatic clustering level 1
Automatic clustering level 2
Automatic clustering level 3
Automatic clustering level 4
Gene family list
Transcription Factor list
TAIR list
Interpro list
KEGG list
Oryza specific list
Arabidopsis specific list
Unclassified genes
Statistics
Tools
GOST: GreenPhyl Orthologs Search Tool
Get classification using BLAST search
Get classification of your id list
Get sequence from Interpro profile
Get fasta from sequence ids
Get phylogenomic scores of your id list
Id converters
Help
Get family classification of your sequence using BLAST search
Paste your sequence in fasta format
(Blast only on sequences integrated into GreenPhyl database)
Use program 'blastp' for protein sequence and 'blastx' of nucleotide sequence
Blast Parameters: Database
Both
Arabidopsis
Oryza
Program
blastp
blastx
Expect
1e-10
1e-50
1e-20
1e-5
1
10
20