Sequence_id (like At1g14920)
Family_name (like GRAS)
Family_id (like 20939)
Alias (like GAI)
Annotation (like GRAS)
Interpro (like IPR005202)
UniProt (like Q9LQT8)
KEGG (like K00430)
EC number (like 3.4.11.18)
Home
Clustering list
Automatic clustering level 1
Automatic clustering level 2
Automatic clustering level 3
Automatic clustering level 4
Gene family list
Transcription Factor list
TAIR list
Interpro list
KEGG list
Oryza specific list
Arabidopsis specific list
Unclassified genes
Statistics
Tools
GOST: GreenPhyl Orthologs Search Tool
Get classification using BLAST search
Get classification of your id list
Get sequence from Interpro profile
Get fasta from sequence ids
Get phylogenomic scores of your id list
Id converters
Help
Name: Only ORYZA Tandem Chr12
Family id:
23410
Number:
2584
Description:
CrossReferences:
PMID:
Phylogenomic analysis performed
Group composition
Group composition
Sequences:
Total (with splice): 3
(ORYZA : 3)
Locus (without splice): 3
(ARATH: 0 - ORYZA: 3)
Get selected sequences in
html
text
disk
Group structure
Group structure
1
2584
(3)
2
3172
(3)
Get phylogenomic relationships for this group
Get phylogenomic relationships for this group
Phylogenomic search bar:
Search in this family
Orthologs
Super-Orthologs
Ultra-Paralogs
relationships with score above
Gene list:
Seq Id
Locus Alias
Uniprot
KEGG
EC
1
2
3
4
InterPro motif
Sequence annotation
Os06g12140.1
2584
3172
protein hypothetical protein
Os08g14710.1
2584
3172
protein hypothetical protein
Os12g42360.1
2584
3172
IPR001810
protein hypothetical protein