Sequence_id (like At1g14920)
Family_name (like GRAS)
Family_id (like 20939)
Alias (like GAI)
Annotation (like GRAS)
Interpro (like IPR005202)
UniProt (like Q9LQT8)
KEGG (like K00430)
EC number (like 3.4.11.18)
Home
Clustering list
Automatic clustering level 1
Automatic clustering level 2
Automatic clustering level 3
Automatic clustering level 4
Gene family list
Transcription Factor list
TAIR list
Interpro list
KEGG list
Oryza specific list
Arabidopsis specific list
Unclassified genes
Statistics
Tools
GOST: GreenPhyl Orthologs Search Tool
Get classification using BLAST search
Get classification of your id list
Get sequence from Interpro profile
Get fasta from sequence ids
Get phylogenomic scores of your id list
Id converters
Help
GOST
GreenPhyl Orthologs Search Tool
GOST
is a powerful tool developed to
predict phylogenomic relationships between any plant gene and O.sativa / A.thaliana gene(s)
. This tool is able to rapidly integrate
one new protein sequence
into a model phylogeny developed on O.sativa and A.thaliana to infer orthologs relationships.
If you want to use nucleic sequences, please visit this website first
DNA/RNA translator
Step1. Your sequence will be attributed to a GreenPhyl family
Step2. Your sequence will be integrated into the phylogenomic tree of the selected family
Paste your PROTEIN sequence in FASTA format
(load example)
Tool developed and maintained by M. Conte, M. Rouard and G. Droc