Family_name (e.g. GRAS)
Sequence_id (e.g. At1g14920)
Family_id (e.g. 20939)
Alias (e.g. GAI)
Annotation (e.g. GRAS)
Interpro (e.g. IPR005202)
UniProt (e.g. Q9LQT8)
KEGG (e.g. K00430)
GO (e.g. GO:0006950)
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About
Get family classification of your sequence using BLAST
Paste your sequence in fasta format
(load example)
(BLAST only on protein sequences available in GreenPhylDB)
Use program 'blastp' for protein sequence and 'blastx' for nucleotide sequence
Blast Parameters: Database
All
Monocotyledons
Dicotyledons
Oryza sativa
Arabidopsis thaliana
Medicago truncatula
Sorghum bicolor
Populus trichocarpa
Vitis vinifera
Physcomitrella patens
Selaginella moellendorffii
Glycine max
Ostreococcus tauri
Chlamydomonas reinhardtii
Cyanidioschyzon merolae
Brachypodium distachyon
Carica papaya
Ricinus communis
Zea mays
Program
blastp
blastx
Expect
1e-10
1e-50
1e-20
1e-5
1
10
20