| Family ID | 22778 |
| Family name | Ribosomal Protein L37e Family |
| Synonym(s) | |
| Cross-reference(s) | |
Curation status  |
|
| Phylogenetic analyzes | Performed |
Link to GreenPhyl V1.0 : 22778
Family structure
| Clustering level | Family id (number of sequences) |
|---|---|
| 1 | 22778 (46) |
| 2 | 27088 (44) |
| 3 | 32583 (44) |
| 4 | 38176 (44) |
Info:
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Annotated gene families at the different levels are underlined. Gene family name pops up when you mouse over.
- Gene families are coloured in blue when the phylogenetic analyses are available.
Family composition
Total : 46
"
| Species | Number |
| Cyanidioschyzon merolae | 1 |
| Chlamydomonas reinhardtii | 1 |
| Ostreococcus tauri | 1 |
| Physcomitrella patens | 5 |
| Selaginella moellendorffii | 2 |
| Oryza sativa | 3 |
| Brachypodium distachyon | 2 |
| Zea mays | 5 |
| Sorghum bicolor | 2 |
| Vitis vinifera | 2 |
| Arabidopsis thaliana | 3 |
| Carica papaya | 3 |
| Populus trichocarpa | 5 |
| Ricinus communis | 4 |
| Glycine max | 5 |
| Medicago truncatula | 2 |
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"
| Species | Number |
| Cyanidioschyzon merolae | 0.1994 |
| Chlamydomonas reinhardtii | 0.0599 |
| Ostreococcus tauri | 0.1294 |
| Physcomitrella patens | 0.1391 |
| Selaginella moellendorffii | 0.0576 |
| Oryza sativa | 0.0445 |
| Brachypodium distachyon | 0.0450 |
| Zea mays | 0.0930 |
| Sorghum bicolor | 0.0550 |
| Vitis vinifera | 0.0657 |
| Arabidopsis thaliana | 0.0904 |
| Carica papaya | 0.1211 |
| Populus trichocarpa | 0.1098 |
| Ricinus communis | 0.1281 |
| Glycine max | 0.0660 |
| Medicago truncatula | 0.0516 |
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Information to display :
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Protein domains
InterPro family
InterPro family
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
| IPR001569 | Ribosomal protein L37e | Family | 96 | (44) | Y |
Other InterPro signatures
Other InterPro signatures
| IPR | Annotation | Type | % | Occurence | Specificity |
| IPR018267 | Ribosomal protein L37e, conserved site | Conserved_site | 37 | (17) | Y |
| IPR011332 | Ribosomal protein, zinc-binding | Domain | 52 | (24) | N |
| IPR011331 | Ribosomal protein L37ae/L37e, core | Domain | 67 | (31) | N |
Domain architecture
Domain architecture
Representative InterPro domains - Consensus schema (alpha version)
Representative InterPro domains - Consensus schema (alpha version)
Protein list
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Phylogenomic analysis
Warning: Please note that the gene tree was reconstructed using PhyML with no optimization (bioNJ). Gene tree with more robust parameters is being processed and will be updated very soon
