| Family ID | 25673 |
| Family name | Pyruvate Decarboxylase/Indolepyruvate Decarboxylase Family |
| Synonym(s) | |
| Cross-reference(s) |
PMID: 8102778
|
Curation status  |
|
| Phylogenetic analyzes | Not available |
Link to GreenPhyl V1.0 : 25673
Family structure
| Clustering level | Family id (number of sequences) |
|---|---|
| 1 | 21337 (155) |
| 2 | 25673 (79) |
| 3 | 31153 (79) |
| 4 | 36825 (79) |
Info:
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Annotated gene families at the different levels are underlined. Gene family name pops up when you mouse over.
- Gene families are coloured in blue when the phylogenetic analyses are available.
Family composition
Total : 79
"
| Species | Number |
| Chlamydomonas reinhardtii | 1 |
| Physcomitrella patens | 5 |
| Selaginella moellendorffii | 8 |
| Oryza sativa | 11 |
| Brachypodium distachyon | 2 |
| Zea mays | 4 |
| Sorghum bicolor | 4 |
| Vitis vinifera | 7 |
| Arabidopsis thaliana | 4 |
| Carica papaya | 3 |
| Populus trichocarpa | 7 |
| Ricinus communis | 4 |
| Glycine max | 12 |
| Medicago truncatula | 7 |
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"
| Species | Number |
| Chlamydomonas reinhardtii | 0.0599 |
| Physcomitrella patens | 0.1391 |
| Selaginella moellendorffii | 0.2306 |
| Oryza sativa | 0.1632 |
| Brachypodium distachyon | 0.0450 |
| Zea mays | 0.0744 |
| Sorghum bicolor | 0.1101 |
| Vitis vinifera | 0.2300 |
| Arabidopsis thaliana | 0.1205 |
| Carica papaya | 0.1211 |
| Populus trichocarpa | 0.1537 |
| Ricinus communis | 0.1281 |
| Glycine max | 0.1584 |
| Medicago truncatula | 0.1806 |
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Information to display :
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Protein domains
InterPro family
InterPro family
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
| IPR012110 | Pyruvate decarboxylase/indolepyruvate decarboxylase | Family | 61 | (48) | Y |
Other InterPro signatures
Other InterPro signatures
| IPR | Annotation | Type | % | Occurence | Specificity |
| IPR011766 | Thiamine pyrophosphate enzyme, C-terminal TPP-binding | Domain | 63 | (50) | N |
| IPR012001 | Thiamine pyrophosphate enzyme, N-terminal TPP binding region | Domain | 82 | (65) | N |
| IPR012000 | Thiamine pyrophosphate enzyme, central region | Domain | 68 | (54) | N |
Domain architecture
Domain architecture
Representative InterPro domains - Consensus schema (alpha version)
Representative InterPro domains - Consensus schema (alpha version)
Protein list
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Phylogenomic analysis
Warning: Please note that the gene tree was reconstructed using PhyML with no optimization (bioNJ). Gene tree with more robust parameters is being processed and will be updated very soon
