| Family ID | 29233 |
| Family name | Ketose-Bisphosphate Aldolase Family |
| Synonym(s) | |
| Cross-reference(s) |
|
| Comment | IPR family, KEGG description |
Curation status  |
|
| Phylogenetic analyzes | Not available |
Link to GreenPhyl V1.0 : 29233
Family structure
| Clustering level | Family id (number of sequences) |
|---|---|
| 1 | 20940 (579) |
| 2 | 29233 (21) |
| 3 | 34844 (21) |
| 4 | 40518 (21) |
Info:
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Annotated gene families at the different levels are underlined. Gene family name pops up when you mouse over.
- Gene families are coloured in blue when the phylogenetic analyses are available.
Family composition
Total : 21
"
| Species | Number |
| Ostreococcus tauri | 1 |
| Physcomitrella patens | 1 |
| Selaginella moellendorffii | 2 |
| Oryza sativa | 1 |
| Brachypodium distachyon | 1 |
| Zea mays | 1 |
| Sorghum bicolor | 1 |
| Vitis vinifera | 1 |
| Arabidopsis thaliana | 2 |
| Carica papaya | 2 |
| Populus trichocarpa | 4 |
| Ricinus communis | 1 |
| Glycine max | 3 |
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"
| Species | Number |
| Ostreococcus tauri | 0.1294 |
| Physcomitrella patens | 0.0278 |
| Selaginella moellendorffii | 0.0576 |
| Oryza sativa | 0.0148 |
| Brachypodium distachyon | 0.0225 |
| Zea mays | 0.0186 |
| Sorghum bicolor | 0.0275 |
| Vitis vinifera | 0.0329 |
| Arabidopsis thaliana | 0.0602 |
| Carica papaya | 0.0807 |
| Populus trichocarpa | 0.0878 |
| Ricinus communis | 0.0320 |
| Glycine max | 0.0396 |
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Information to display :
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Protein domains
InterPro family
InterPro family
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
| IPR000771 | Ketose-bisphosphate aldolase, class-II | Family | 76 | (16) | N |
| IPR006411 | Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype | Family | 5 | (1) | Y |
Other InterPro signatures
Other InterPro signatures
| IPR | Annotation | Type | % | Occurence | Specificity |
| IPR013785 | Aldolase-type TIM barrel | Domain | 52 | (11) | N |
| IPR006115 | 6-phosphogluconate dehydrogenase, NAD-binding | Domain | 57 | (12) | N |
| IPR013328 | Dehydrogenase, multihelical | Domain | 38 | (8) | N |
| IPR008927 | 6-phosphogluconate dehydrogenase, C-terminal-like | Domain | 33 | (7) | N |
| IPR015815 | 3-hydroxyacid dehydrogenase/reductase | Domain | 57 | (12) | N |
| IPR016040 | NAD(P)-binding domain | Domain | 43 | (9) | N |
| IPR002204 | 3-hydroxyisobutyrate dehydrogenase-related, conserved site | Conserved_site | 43 | (9) | N |
Domain architecture
Domain architecture
Representative InterPro domains - Consensus schema (alpha version)
Representative InterPro domains - Consensus schema (alpha version)
Protein list
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Phylogenomic analysis
Warning: Please note that the gene tree was reconstructed using PhyML with no optimization (bioNJ). Gene tree with more robust parameters is being processed and will be updated very soon
