| Family ID | 30745 |
| Family name | N/A |
| Synonym(s) | |
| Cross-reference(s) |
|
Curation status  |
|
| Phylogenetic analyzes | Not available |
Link to GreenPhyl V1.0 : 30745
Family structure
| Clustering level | Family id (number of sequences) |
|---|---|
| 1 | 21095 (294) |
| 2 | 25211 (241) |
| 3 | 30745 (226) |
| 4 | 36448 (199) 39523 (27) |
Info:
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Annotated gene families at the different levels are underlined. Gene family name pops up when you mouse over.
- Gene families are coloured in blue when the phylogenetic analyses are available.
Family composition
Total : 226
"
| Species | Number |
| Physcomitrella patens | 15 |
| Selaginella moellendorffii | 40 |
| Oryza sativa | 18 |
| Brachypodium distachyon | 8 |
| Zea mays | 23 |
| Sorghum bicolor | 18 |
| Vitis vinifera | 24 |
| Arabidopsis thaliana | 14 |
| Carica papaya | 6 |
| Populus trichocarpa | 28 |
| Ricinus communis | 8 |
| Glycine max | 15 |
| Medicago truncatula | 9 |
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"
| Species | Number |
| Physcomitrella patens | 0.4174 |
| Selaginella moellendorffii | 1.1528 |
| Oryza sativa | 0.2671 |
| Brachypodium distachyon | 0.1801 |
| Zea mays | 0.4278 |
| Sorghum bicolor | 0.4953 |
| Vitis vinifera | 0.7886 |
| Arabidopsis thaliana | 0.4217 |
| Carica papaya | 0.2421 |
| Populus trichocarpa | 0.6146 |
| Ricinus communis | 0.2562 |
| Glycine max | 0.1979 |
| Medicago truncatula | 0.2323 |
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Information to display :
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Protein domains
InterPro family
InterPro family
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
| IPR016283 | Glycoside hydrolase, family 19 | Family | 47 | (107) | Y |
Other InterPro signatures
Other InterPro signatures
| IPR | Annotation | Type | % | Occurence | Specificity |
| IPR000726 | Glycoside hydrolase, family 19, catalytic | Domain | 92 | (208) | N |
| IPR001002 | Chitin-binding, type 1 | Domain | 45 | (101) | N |
Domain architecture
Domain architecture
Representative InterPro domains - Consensus schema (alpha version)
Representative InterPro domains - Consensus schema (alpha version)
Protein list
Build your own display:
Phylogenomic analysis
Warning: Please note that the gene tree was reconstructed using PhyML with no optimization (bioNJ). Gene tree with more robust parameters is being processed and will be updated very soon
