| Family ID | 33690 |
| Family name | N/A |
| Synonym(s) | |
| Cross-reference(s) |
|
Curation status  |
|
| Phylogenetic analyzes | Not available |
Link to GreenPhyl V1.0 : 33690
Family structure
| Clustering level | Family id (number of sequences) |
|---|---|
| 1 | 20982 (457) |
| 2 | 28148 (4) |
| 3 | 33690 (4) |
| 4 | 40487 (3) |
Info:
- Sequences are clustered and classified at 4 levels (from less to more stringent).
- The number between parenthesis indicates the number of sequences in the cluster.
- Annotated gene families at the different levels are underlined. Gene family name pops up when you mouse over.
- Gene families are coloured in blue when the phylogenetic analyses are available.
Family composition
Total : 4
"
| Species | Number |
| Oryza sativa | 4 |
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"
| Species | Number |
| Oryza sativa | 0.0594 |
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Information to display :
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Gene name UniProt KEGG InterPro Annotation Gene Ontology PubMed Filter Status
Protein domains
InterPro family
InterPro family
| IPR | Annotation | Type | % | Occurence | Specificity |
|---|---|---|---|---|---|
| IPR001938 | Thaumatin, pathogenesis-related | Family | 100 | (4) | N |
Other InterPro signatures
Other InterPro signatures
No other significant IPR (i.e. > 25%)
Domain architecture
Domain architecture
Representative InterPro domains - Consensus schema (alpha version)
Representative InterPro domains - Consensus schema (alpha version)
Protein list
Build your own display:
Phylogenomic analysis
Warning: Please note that the gene tree was reconstructed using PhyML with no optimization (bioNJ). Gene tree with more robust parameters is being processed and will be updated very soon
