Selected Sequences:    95 /Selected Residues:     499
    Deleted Sequences:      0 /Deleted Residues:     1220

    Gaps Scores:           =0=   <.001  <.050  <.100  <.150  <.200  <.250  <.350  <.500  <.750  <1.00   =1=  

                                 10        20        30        40        50        60        70        80        90       100       110       120
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ------------------------------------------------------------------------------------------------------------------------
    Cucsa.165600.1_CUCSA M-------------------------------------------------------------------------------------------------P-SDF-------TFGNSTLSVD
    Cre22.g762950.t1.1_C M---------------------------RRTPILALLALQAALAS----------AVP-------------------------------AAELGLWPKP-QRL-------VVTDETLALD
    Bradi2g37460.1_BRADI M----------------------------LPKLLTYLVLA-LVAG----------SGAGAGAARLHRTP-ANLTAS-------------ANPVYIWPLP-KNF-------TSGTRTLAVD
    Glyma02g10570.1_GLYM M----F------------------LLFFKPTTSLLFLFF---FLI----------ISVTSLTVPPR----GGAPLD--------SDDDIDSLTYLWPLP-AEY-------TFGVDALSVD
    Selmo_422155_SELMO   M-----------------------------------------------------------------------------------------------------------------------
    47890.m000013_RICCO  M-----------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM TSRG--------------------------------------------------------------------------------PHHT---------KP-PSLPPHSP--SPPQLPTTIN
    GSVIVP00009338001_VI M--------------------------GKIVKSFCFLVFFGVI----------------------------------------------VEGLNIWPMP-NSV-------NHGHQIMYLS
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C MATP--------------------TYKSIFSLTIFTLFL-SF-------------SIS--------------------------PSTQ--YSINVWPKP-TFF---SW--LKPE-ATLLS
    MDP0000129369_MALDO  MATT------------------------------------------------------------------------------------------------TTLAEVSLSTPRVVLSKATE
    GSMUA_Achr11T11230_0 M-----------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI M-----------------------AVSDKALFSIVFLFT-AFVSS----------ISA--------------------------SESQ--SQINVWPKP-RTF---SW--PSPQ-ASLLS
    Sb01g042640.1_SORBI  M-----------------------AASPYFLLLLLFL----FHPL----------AAL-APLAPSPSPSPSQPSPPRSQP--PPPRVP--QQVQVWPKP-VSI---SW--PLPV-YAPLS
    GSMUA_Achr5T28320_00 M----------------------ASKTFDPFALPCFLLLSLAASL----------LLSPSHGRIPHRRP-ASSSAD-------------DQLVYLWPLP-KLF-------RHGYRTLSVD
    At1g65590.1_ARATH    M----------------------------RGSGAKIAGVLPLFML----------FIAGTISAFEDI----------------------ER-LRIWPLP-AQV-------SHGGRRMYLS
    Selmo_445016_SELMO   M-----------------------------LVAISILVFLPVALG----------GASSGIHGFAE-----------------------EKEIPVWPKPHSLL-------ASGSGSLALA
    Selmo_429325_SELMO   M------------------------FGSNGLRKIFVIGVIALV-------------IIIANILWSKSSVYSFWHVGPSRSLVHWDDHNS-TGVFIWPAP-KNV-------SKGSISMRLS
    Tc05_g015670_THECC   MGKMAS------------------EAFF-VVVVAAAAAVVLANAL----------PVRSERGG-VEK----------------------DE-VNIWPMP-AWV-------SHGRGHLYMS
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA M-----------------------------------------------------------------------------------------EQVKIWPMP-KEV-------KYGRKSFYLG
    29929.m004503_RICCO  MG---L------------------QMHFQLAVMLLMLLVGNGH----------------------GS----------------------SD-FNIWPMP-NSV-------SNGYRRLYMA
    Selmo_422260_SELMO   M-----------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI MA-------------------------------QALR--PLLVLL----------AIGSCIA----A----------------------DH-IDLWPMP-KSV-------THGAQRLYVS
    GRMZM2G117405_P01_ZE M-------------------------APAAALALSLLLAFLAIGP----------CAA-------------------------------ADSIDLWPMP-QSV-------SHGTQKLYVK
    Medtr2g062560.1_MEDT M-----------------------------LLQLLFLFLFF-------------------------------------------PFST--TSLNIWPKP-RNL---TW--TPPHQTTLLS
    Os07g38790.1_ORYSA   MATKNGG-----------------------FVALLLLLS-FLLSS----------PLP------------------------ARCDAP--LPVNVWPKP-TSM---SW--AEPHMAVRVS
    Glyma10g43710.1_GLYM I------------------------SSSVLQTLFLFCSA---FFV----------SQALGA---------RIPQPH-------------KPLPFIWPLP-AKF-------SFGNDSLSVD
    Glyma08g16970.1_GLYM MTQQ--------------------ESTMSLIFLQLLLLL-SCL-T----------LNN------------------------SIAEST--TIINVWPKP-RNL---TW--SPPYQTTLLS
    Sb09g001670.1_SORBI  M----------------------------PLNLHAYLLSALLLLA----------GAAAAAAARHHASPAANATSS-------------SEPVYLWPLP-KSV-------SSGSRTLTVD
    Os05g02510.1_ORYSA   M----------------------------PPKLLTYLILA-LLA-------------ASAAAARRHPSP-ASSAAA-------------GEPVYLWPLP-RNF-------TSGSRTLLVD
    Bradi3g44610.1_BRADI M-----------------------------AM--AMRLILLL-------------PVIGCATA-AGG----------------------GR-VDLWPMP-ASV-------SSGDKALYVA
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  M-----------------------------------------------------------------------------------------------------------------------
    Phypa_128384_PHYPA   ------------------------------------------------------------------------------------------------------------------------
    POPTR_0009s03010.1_P M-----------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------------------------MQILIVILLMGFLLA-SA-AP----------FSS--------------------------SQSD--SGVNVWPKP-RNF---SW--PQPQ-AHLLS
    GRMZM5G860235_P01_ZE MAT--------------------------VLLPLLLLLG-SAVTL----------LTC------------------------AGAGAS--FPVNVWPKP-TSM---SW--AEPHAAVPVS
    At1g05590.1_ARATH    MLT---------------------LSKFHVILIPILFFI-TLLSP----------L----------------------------FSIA--LPINIWPKP-RFL---SW--PQHK-AIALS
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH M-----------------------------NSLPVLLLLLLLLSL-------------FLLSSPSHRFRNSTAALD-------------DSTVYIWPLP-KEF-------RHGDRTLAVD
    PDK_30s998691g002_PH MAKIF-------------------LLSSLSILSVLFLFL-FLFPL----------S----------------------------YSQA--LPINVWPKP-TTI---SW--PIPR-ATPLS
    At3g55260.1_ARATH    M------------------------STNLLRLILLFITLSITSSL-------------------------STPSPA-------------DSPPYLWPLP-AEF-------SFGNETLSVD
    MDP0000798095_MALDO  M---------------------------------SSLFL---SLF----------IISHSLCVLVN----SAGEVN-------------DSLTLLWPLP-AEF-------TFGNKTLSVD
    Glyma18g52290.1_GLYM M------------------------FVFKPTSSLLFLLLSISYSA----------SSVTSLTVPPR----GGAPLDLTTTPQQQTDGDDDSLTYLWPLP-AEF-------TSGGDTLSVD
    GSMUA_AchrUn_randomT Y-----------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA MA----------------------LQRKTNNLTNFLVFL-FFISP----------I----------------------------SSLQ--FSINVWPKP-RAF---NW--PHPQ-AALLS
    GSVIVP00009337001_VI M-----------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P MG---L------------------KSAW-LVVVFMFLGVAVAK----------------------NV----------------------NE-LNLWPMP-KWV-------SRGHSRVYMS
    Glyma20g38400.1_GLYM ------------------------------------CGV---CPV----------YCSLGA---RI----PQPQPH-------------KSLPFIWPLP-AKF-------IFGNDSLSVD
    PDK_30s883821g041_PH MPLGAA------------------SSGAGQTLSVGFFIGIL-LGF----------CFL-------------------------------ADGINLWPMP-KSV-------SHGSQTLYLG
    cassava4.1_033827m_M M------------------------LLGSSKSVTIFVILAVLRLN-------------------------FAFKLN-------------DKLTYVWPLP-SEI-------SSGDHILSID
    Tc05_g024510_THECC   MLQSLNHKALYNAFEMTSREGKRRMLSKFLIIACLTVI-----------------LAP--------------------------PTLSLQSEINVWPKP-RLL---VW--PKPL-ATFLS
    cassava4.1_007813m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI MAANNRH-----------------GFLAILLLSLLSLAPLRSRAQ----------TTP------------------------TTPSSS--FPVNVWPKP-VSM---SW--AEPLMAMTFS
    Cucsa.178740.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  M-----------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   M-----------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   M---------------------------APAM--ALRLLVVVAVA----------AVVSCAVA-ADE----------------------GSVVEVWPMP-ATA-------SKGGQTLHVS
    GSVIVP00009334001_VI M-----------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 M-----------------------ESTPSILFFLVFVVIVNVISL------------------------------------VSSSDAAPLIEINVWPKP-ISV---SWSGPAAI-AVPLS
    Sb02g037280.1_SORBI  MAT--------------------------LLLQLLFLLG-WPVTL----------LTC------------------------AAAGAS--FPVNVWPKP-TSM---SW--AEPHSAVPVS
    Selmo_422139_SELMO   M-----------------------LWSSKRLRKIFVIGILALILS-----------SIVTNTYWSKRSKSSFWHVASSITLTNWDDRSSNTSVLIWPAP-RNL-------SQGSILMTLS
    POPTR_0001s23930.1_P ------------------------MTSNLVISSRCSLFL-TLFYL----------LVS--------------------------ASLTATSAQWVWPKP-RTL---SW--PIPL-ATILS
    GRMZM2G034598_P01_ZE M----------------------------PPNRPAYLLSA-LLLA----------AAAAAVGARRHASPAANATFA-------------GEPVYLWPLP-KSV-------SSGSRTLTVD
    cassava4.1_023099m_M M-------------------------GLQLLRVWVLLLLFGLVVI----------VGGGGAT---------------------------VGDFNIWPMP-ESV-------TNGHSRLYLA
    29616.m000216_RICCO  ------------------------MRITTFIITCCTLL----------------------------------------------TATA--TGITVWPKP-RVF---TW--QHPQFATLVS
    cassava4.1_004406m_M ------------------------MRLIIFSLSYTFLIW-GIFSS----------LTP--------------------------TYAS--AEINVWPKP-TSL---SW--PHPQ-AALLS
    GRMZM2G134251_P01_ZE MAV---------------------AASPYF--LLLFL----FHSL----------AAL-ASLAPPP-----------SQP--PPPRVP--QKVQVWPKP-VSI---SW--PLPA-YAPIS
    POPTR_0010s21790.1_P M----K----------------------------SYLLL---LFT----------ICTF-L---LY----SSAELD-------------DNLTYVWPLP-AKF-------SSGNNTLSVD
    Bradi2g25310.1_BRADI M---------------------------------ALRLVLAL-------------ALVGCAAA-AAA----------------------GR-VDLWPMP-ASV-------SSGAKTLYVA
    Sb09g020420.1_SORBI  M--------------------------ASPALRLRLRLLLLLAV-----------AATATARG-AGA----------------------GR-VDLWPMP-ASV-------ARGAQTLLVS
    Phypa_90762_PHYPA    MSVHTITAVDAHEAALFGSRRWNWDKQCGLREEGKPIPQLASLGVGWKRFWRDGSSRSSSKHSGIRFRAFGGKRSAFFGTIDFNGKKKEKDDVKIWPMP-VEV-------VLGDGKLSLE
    POPTR_0001s23910.1_P ------------------------MTSNLVISSRCSLFL-TLFYL----------LVS--------------------------ASLTATSAQWVWPKP-RTL---SW--PIPL-ATILS
    supercontig_88.33_CA M-----------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI M--------------------------AVPYHFSSFVFV---FTL----------ICALGVSLGFN----STSDLD-------------DSLVYLWPLP-SEF-------TFGEDVLAVD
    POPTR_0008s04960.1_P M----------------------------------------------------------------------------------------------TGVP---------------------
    Os01g66700.1_ORYSA   MA-------------------------------QALSLGLLLAFL----------AIQSCIAI-ELT----------------------DH-IDLWPMP-TSV-------SHGTQRLYVS
    Tc00_g000370_THECC   M----L------------------PFSQKPHSKFSFFIF---SFC----------VCQLVV---LN----SGFELD-------------ESLTYIWPLP-SEF-------KSGNETLTVD
    Bradi1g69660.1_BRADI M-----------------------AALPSL-VVLLLL----LHPA----------AAP-AARAPPP-----------SKP--PPPQPN--QKVFVWPKP-TSI---SW--PSVV-YAPLA
    GSMUA_Achr11T11280_0 M---------------------------------------------------------------------------------------------VRPTP---------------------
    Os03g11980.1_ORYSA   M-----------------------AALPAY-LLLLLLILVILRPA----------AAPGAASQPPT-----------SEPHLPPPLLA--QKVQVWPKP-TSI---SW--PSAV-YAPLS
    GSVIVP00007781001_VI M-------------------------G-KIVKSFCFLVFFGVL----------------------------------------------VEGLNIWPMP-NSV-------NHGHQIMYLS
    Selmo_117332_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM MTKL--------------------EPTL---FLLLLFML-SCLIT----------VNN--------------------------AHST--TIINVWPKP-RNL---TW--APPYQATLIA
    supercontig_88.31_CA M-----------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   M------------------------FGSNGLRKIFVIGVIALVLL----------FIIIANILWSKSSVDSFWHVGPSRSLVHWDDHNS-TGVFIWPAP-KNV-------SKGSISMRLS
    GRMZM2G121514_P01_ZE M-----------------------------AAALRPRLLVLLAV-----------AAAATGPSCAGA----------------------GR-VDLWPMP-ASV-------ARGAQTLLVS
    Selmo_441789_SELMO   M-------------------------EMRRLFGFLIFWS---------------------------------------------VQVCRGSDLFLWPQP-QIV---EA--IDRS-CHLIS
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  M-----------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                130       140       150       160       170       180       190       200       210       220       230       240
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ----------------------------------------------------------------------------------LN------Y-----GIDESYTLSV-PTTGE----PLYA
    Cucsa.165600.1_CUCSA PRLSLLAAGNA-G-NSEILKAAFDRYRGIIFKHA--SG----------VSMLDK--LWGRRRTFVYDISELKIDVQSDS-EELH------L-----GVDESYTLLV-SKKDA-HSIIGEA
    Cre22.g762950.t1.1_C PLGLPVSC--KPAPCGQVVLMAVARFRKNARLSHYRPATWAAPAGATAGATATAGAPAATAATAAAAVTELVLHVKDQS-APLQ------L-----GVDEAYDIQV-PGGGG-----GSV
    Bradi2g37460.1_BRADI PDLALDPQGPG-G-AAAAVAEAFERYRSLIFAPW--AH----------AA---------RPASAKYDVAKLTVVVASAD-ETLE------L-----GVDESYTIYV-AASGGVNSIVGGA
    Glyma02g10570.1_GLYM PALTLSVAGNG-G-GSAILRAAFDRYRGIVFKHT-GVG----------FSFFRKLRERLVSSVSAFDVDTLKITVRSDN-EELQ------F-----GVDESYTLLV-PKAKE-SS---QV
    Selmo_422155_SELMO   -----------------------DRYTALISGQR-------------------TLVQDLVINPPKFVLDKLRIDLFSYN-QSLH------I-----GTDESYHLQI-PDPLD----PKSA
    47890.m000013_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM TSLP-LSP--DTKTSGEHLH------------------------------------------------KHSSTEVSHLH-CPRSQCRTRPH-----GVDESYTLSI-LPS------L--A
    GSVIVP00009338001_VI NDFALKSDGSKYNDASGILKDAFSRLLDVIEVDH-------------------VIDSNFSHFDPMAILHGIHVIVWSQN-DELQ------Y-----GVDESYKLSI-PSHGT----QVYA
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C PNFT-ITS--P---SHPHLAPSVNRYLHLITTEHHHPL-----IPP--PVNLIPS-S--------PPLQTLSITISDLS-IPLH------H-----GVNESYTLTI-PSGNS----I--A
    MDP0000129369_MALDO  APRAFQSLNIPTWRSYSSVGRSMTLVRPLLLSEHHRPL--------------VNPSSSVRINTSAPPLLTLSITVTDLA-ALLH------H-----GVDESYTLTI-PITGG------AA
    GSMUA_Achr11T11230_0 --------------------------IDVVEVNHIVDG----------------------RTPTSSVLAGLNVVILSPQ-DQLN------F-----GIDESYKLDV-PAAGK----HVYA
    GSVIVP00003707001_VI PNFS-ITS--P---NHQHLSSAVARYLRLILTEHHHPL-----VTP--TVNI--T-G--------PPLETLTIIVSDLA-APLH------H-----GVDESYTLIV-PR-GG----A--A
    Sb01g042640.1_SORBI  PSFS-IRA--SP--SHPSLRHAIAYYTRLIRTERHAPI-----MPP---VNYTIA-G--------VPIRLLALSVSDPD-TKLG------P-----GVDESYTLSV-PPNSS----S--A
    GSMUA_Achr5T28320_00 PDLALDLQIPG-G-ESLALSEAFERYRDLIFTQW--ER-------------------SAQRSYMDYDVNKLTVLVASND-DTLQ------F-----GVDESYTLSV-GGGES-FSVVNGA
    At1g65590.1_ARATH    GDFKLVTEGSKYGDASGILKEGFDRMLGVVRLSH-----------------VISGDRNSSGTGGSALLQGLHVIISSST-DELE------Y-----GADESYKLVV-PSPEK----PSYA
    Selmo_445016_SELMO   ENFTLRSS----PDSIATLSSAFARYREIIFLHH------------------SIFLASRQIPESIPQLQALSVRISSPD-ETLQ------I-----GVDESYRLQI-PDPDD----ATAA
    Selmo_429325_SELMO   TKFAIT----P-PRTLKVLQAGIDRYTVLILKQR-------------------KLRIPAKKNPPDFVLDELRIELKSFN-QSVL------FLYFGSGVDESYRLQV-PDPSN----SRVV
    Tc05_g015670_THECC   NDFVLSTEGSGYGDASGILKDAFHRMLAVITLDH-----------------VV-DA-NFSALHDQPLLQGLRIVISSPK-DQLQ------Y-----GIDESYKLMV-PSPEK----PAYA
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA EDFKLVT---KHDDSSGILKEEFDRMFGVVKMSH-------------------VVAANLSGFAKSNILQGLHIVISSPN-DEAC------F-----FPFTN-------------------
    29929.m004503_RICCO  PHFQLLTD---WDDASGILNDAFSRMLHVVQMDH-----------------ALKNA-NFSASHPSLILKGLHILILSPNLQQLQ------Y-----GVDESYKLLV-PAPEK----PEYA
    Selmo_422260_SELMO   ------------------------------------------------------------ATRTSTIFPAIVTQTQSYT-MILQ------I-----GVDESYRLQI-PDPDD----ATAA
    Bradi2g57420.1_BRADI KDATMSMVGSTYSDEKAILKDAFQRMLDLMKLNH-----------------NADDT-NRS----SFVLTGVNMVVHSPE-DELS------F-----GVDESYNLTV-PTIGD----PLHA
    GRMZM2G117405_P01_ZE KDITMSMVGSTYSDEKSILKDAFQRMLDLITLNH-------------------VIDGIDPG---SSVLTCVNVVVRTPE-DELS------F-----GADESYNLTV-PTTGD----PLYA
    Medtr2g062560.1_MEDT STFT-ITT--TTLHHNNHLTAAISRYTNLIKTEHNHPL-----IPP--KTNLSNN-L--------PPLQTLTITITNPN-TELN------H-----ATDESYTLII---TTP----T--A
    Os07g38790.1_ORYSA   SSFH-VVA--PSG--NAHLLSAARRYAALLLAERYRPL-----VTP--AVNVTAGGAGAGAAGRGAELGYLTLAVSDLH-APLQ------H-----GVDESYALEI-LPAGA----A--A
    Glyma10g43710.1_GLYM PALSLS--GNG-A-ASAIVRDAFHRYKGILFKHG--DR----------FSFLRT-------PRPVYDVTRLSINVHSHS-EELQ------L-----GVDESYNLFV-SRAQA-LSGAGQV
    Glyma08g16970.1_GLYM STFT-ITT--TTNHHNKHLSIAIRRYQNLIKSEHHHPL-----VPQ--AVNISNKYL--------PPLQTLKVTVVDTA-AELV------H-----AVDESYTLSI-LP-SS----C--A
    Sb09g001670.1_SORBI  PDLALDPQGPG-G-RSPAVAEAFQRYRGHVFTPW--AH----------AA---------RPRGARYDVTRLTVVVNSAN-DTLA------L-----GVDESYAIYV-GAAGGVNSIVGGA
    Os05g02510.1_ORYSA   PDLALDGQGPG-G-AAAAVAEAFERYRSLVFSPW--AH----------AA---------RNASGGYDVGKLTVVVASAD-EKLE------L-----GVDESYTIYV-AAAGGVNSIVGGA
    Bradi3g44610.1_BRADI KDLKMSAVGSKYADGKTILVEAFQRIVSVIQMDH-----------------AIVGS-Y----DRLPVLTGVNVVVHSPD-DELK------F-----GVDESYNLSI-PATGS----PMYA
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  ---------------------------------------------------------------QGAPVLRLGIGAVPGQ-----------------TSPEAYTLDI---------NSDGI
    Phypa_128384_PHYPA   ---------------------------------------------------------------------------------QLQ------Y-----GVDESYMLDV-RDSSD----SNVA
    POPTR_0009s03010.1_P --------------------------------------------------------------------------------------------------PEAWMLESRPGNG---------
    MDP0000564236_MALDO  PNFA-ITS--PA--NHKYLSSAVKRYHQLLLSEHHRPL-----VNPSSSVRINTS-A--------PPLLTLSITVADLA-APLH------H-----GVDESYTLTI-PITGG----A--A
    GRMZM5G860235_P01_ZE PSFH-IVA--SSG--NPYLASAAERYAKLLFRETYRPI-----VRP--AVNVTAG----------NALEKLTVAVSDLA-APLQ------H-----GVDESYTLEI-LPTGA-------A
    At1g05590.1_ARATH    PNFT-ILA--P---EHQYLSASVTRYHNLIRSENYSPL-----ISY--PVKLMKR----------YTLRNLVVTVTDFS-LPLH------H-----GVDESYKLSI-PIGSF----S--A
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH PDLALRLEGPG-GNNSTILKEAFERYKDLIFKPW--AR-------------------SVRRWSGVYDVSELTVFVSSDN-ETLQ------L-----GVDESYTLY---------------
    PDK_30s998691g002_PH PSFQ-ILS--AYS-QEPHLQSAVARYTRLLFSEHHHPI-----VAP--AVNLSS--S--------PPLRSLTLSISDLS-SPLQ------H-----GVDESYSLSI-SSSTG----L--A
    At3g55260.1_ARATH    PTVTLIVAGNG-G-GSLIIRAAFDRYMGIIFKHA--SG----------RGSLLS--RIRFLKMVEYDITSLKIVVHSDS-EELQ------L-----GVDESYTLMV-SKKNE-QSIVGAA
    MDP0000798095_MALDO  PALSLVVGGNG-G-GSGILKLGFDRYREIIFKNN--HG----------VLALNT----LRGSRQSYDISKLRIVVESAD-EDLQ------L-----GVDESYTLFV-VKNDG-KSIVGEA
    Glyma18g52290.1_GLYM PALTLSVAGNG-G-GSAILREAFGRYRGIVFKNTAGVG----------FSFIRKLRERLVSSVSAFDVDTLKITVHSDN-EELQ------F-----GVDESYTLLV-PKAKE-SS---QV
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA PNFT-IIS--P---NRHYLSSAVDRYLRRILTEKHRPL-----VGP--SLNISSS-A--------SPLHKLIVKVADLS-APLQ------H-----GVNESYTLDI-SVT-G----S--A
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P QDFQLVTDGSKYIDGSEILKDGFTRMLDVVKVAH-----------------VV-DG-DLSSVDKSLIIKGIHVLIFSPD-DQLQ------Y-----GVAESYKLLV-PSPEM----PDYV
    Glyma20g38400.1_GLYM PALSLS--GNG-A-ASAIVRDAFDRYKGILFKHG--DR----------FSFLRT-------LRPVYDVTKLSINVHSHS-EELQ------L-----GVDESYNLFV-SRAQA-LSGAGQV
    PDK_30s883821g041_PH RDFQLTTDGSKYSDGSGILKDAFRRMINLVEASH-------------------TIAGRVPG---SGVLTGVNVVVLSSD-DQ--------------------------------------
    cassava4.1_033827m_M PGLSLVVGGEG-G-NSSIIEDAFERYKRILFKDG--ES----------FSIFQA----FRFKRSAYDINELKIVVHSPN-EELQ------L-----GVDESYTLLV-DGGDG-ESIIAEA
    Tc05_g024510_THECC   PNFT-ISS--P---NHQHLTPAVNRYLRLIKTEHHHPL-----VTP--SVIVSNS-S--------APLKTLSINVIDLT-ATLQ------H-----GVNETYALAV-SEVDG----T--A
    cassava4.1_007813m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI PSFR-IVVAPSSGEQNPYLVSAAQRYTALLFTERYRPI-----VRP--AANVTAQ----------TALESLTLAVSDPQ-APLQ------D-----GVDESYALQI-PLAGG----A--A
    Cucsa.178740.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   RELRMTAEGSKYADGEAILKDAFQRMVTLIELDH-----------------VINGS-S----QGLPLLAGVNVVVHLPG-DELN------F-----GVDESYNLSV-PATGS----PIYA
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 PSFR-----------------------------RYRPL-----RPP--HLNLSSS-A--------PPLSSLALSVVDPS-APLR------H-----GVDESYTLSI-TANGS----SSVA
    Sb02g037280.1_SORBI  PSFH-IVA--SSG--NPYLVSAAERYAKLLFKETYRPI-----VRP--AVNVTAG----------NALETLTLAVSDLA-APLQ------H-----GVDESYTLEI-LPTGA-------A
    Selmo_422139_SELMO   RQFSISFSSAA-GENLEVLQAGIDRYTSLILRQR-------------------KLKTPAKIDPEKFVLDELCIDLKSFN-QSLH------L-----GVDESYRLQI-PDPLN----SKAA
    POPTR_0001s23930.1_P PNFT-ISS--P---YHQHLSPAVNRYRLQILTEHHRPL-----VPP--PVNLSNS-S--------PPLQALTITVKDLS-APLQ------H-----SVDESYALAI-PTASS----T--A
    GRMZM2G034598_P01_ZE PDLALDPQGLG-G-RSPAVAEAFQRYRGLVFAPW--AH----------AA---------RAGRARYDVTRLTVVVASAN-DTLA------L-----GVDESYAIYV-AAAGGVDSIVGGA
    cassava4.1_023099m_M PDFQLITEGTNYSDASGILKDAFTTMIRLIHMDH-------------------VLDANISAFHPPLILKVLQVLIFSPN-DQLQ------Y-----GVDESYKLLV-PSPYK----PDFA
    29616.m000216_RICCO  PAFA-ITA--P---NHPHLSPAINRYLHQILTERYPPL-----INP--SINISNA-S--------PPLQILSITVSNLA-TPLH------H-----GVNESYSLII-PAKDS----T--A
    cassava4.1_004406m_M PGFY-ISS--P---NHPYLSPAVNRYLLQILTEHYQPV-----VEP--SVNLSAS-A--------PPLQTLAIIVADLS-APLH------H-----GVNESYSLFI-PSDGD----T--A
    GRMZM2G134251_P01_ZE PSFN-IRA--SP--SHPSLRHAIAYYTRLIRTERYTPI-----MPP---VNYTVS-G--------VPIRLLALSVSDPD-VPLG------P-----GVDESYTLSV-PPNSS----S--A
    POPTR_0010s21790.1_P PELSLVLGGKG-G-DSSIIKDGFGRYKKIIFKHS--SK----------SYSVNK--------RLVFDIGVLKIVVLSDN-EELQ------L-----GVDESYLLLV-EKRNG-QSIIGEA
    Bradi2g25310.1_BRADI KDLKLSATGSKYADGKAILAEAFKRMVAVVQMDH-----------------AVNGS-Y----RGLPVLAGVNVVVRSPD-DELK------F-----GVDESYKLSV-PATGN----PMYA
    Sb09g020420.1_SORBI  KDLKLSTAGSSYADGKGILKEAFQRMLAVVELDH-----------------AINGT---YSSHGAPVLAGVRVAVRSPN-DELN------F-----GVDESYKLSV-PATGN----PLYA
    Phypa_90762_PHYPA    RNTIIDVA--DNASVPDTLANAFARYYDVIFTHH-----------------------TQQSRSSFPALTKLVVTLDSRD-EETW------R-----EHSNPVDLLT-----------IGT
    POPTR_0001s23910.1_P PNFT-ISS--P---YHQHLSPAVNRYRLQILTEHHLPL-----VPP--PFNLSNS-S--------PPLQALTITVKDLA-APLQ------H-----SVDESYALAI-PTASS----T--A
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI PDLSLAVGGDG-G-NSDIVREAFLRYRGIIFKHS--TR----------FSKFRG--------RSMYDISKIRIIVHSDS-EMLQ------L-----GVDESYSLLV-AKNDD-HSIIGEA
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   KDITMSMEGSTYPDGKGILKDAFQRVVDLMKLNH-----------------VVDGA-NPS----SFVLTGVNVVVHSPE-DELK------F-----GVDESYNLSV-PTAGY----PLRV
    Tc00_g000370_THECC   PTLSLSVLGKG-G-DLKILREGFERYKKIIFKHV--SG----------VSIFEK----WIGIRSVYDISELRIIVNSDS-EELQ------L-----GVDESYTLSV-AKNDG-KSIVGEA
    Bradi1g69660.1_BRADI PSFS-IRA--VP--SHPSLRHAIGYYSRLIRSERHMPL-----VPP---ANYTLA-R--------VPVRLLALSVSDTE-VPLG------P-----AVDESYTLSV-PLDSA----S--A
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   PSFS-VRA--VL--SHPSLRQAVAFYTRLIRAERHAPL-----VPP---ANYTLS-R--------VPVRTLTLSVSDPD-VPLG------P-----AVDESYTLSV-LPDSG----S--A
    GSVIVP00007781001_VI NDFALKSDGSKYNDASGILKDAFSRLLDVIEVDH-------------------VIDSNFSHFDPMAILHGIHVIVWSQN-DELQ------Y-----GVDESYKLSI-PSHGT----QVYA
    Selmo_117332_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM STFTIITT--TTPHHNKHLSAAIIRYQNLVKSEHHHPL-----VPP--GVNISTN-L--------PPLNSLTLTVLDPG-AGLV------H-----DVDESYTLSI-PPSSS----S--A
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   TKFAITP-----PRTLKVLQAGIDRYTVLILKQR-------------------KLRIPAKKNPPDFVLDELRIELKSFN-QSLY------L-----GVDESYRLQV-PDPSN----SRVV
    GRMZM2G121514_P01_ZE KDLRLSTAGSSYPDGKGILTEAFRRMVAVVELDH-----------------AINGT---Y-SRGAPVLAGVHVAVRSPN-DELN------F-----GVDESYRLSV-PATGD----PLYA
    Selmo_441789_SELMO   PTFT-ISV--PAG-SPKLLRAAASRYKRQVCTEKWSAVS----IQA--RISSQSA-Q--------ATISRLVISVSDLR-AGLQ------N-----GVDESYTLVV--SEGD----S--A
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                250       260       270       280       290       300       310       320       330       340       350       360
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P HIEVYFKLIKNFLWSGVPFFFLGRCVGWRESGAIWVYGSYEGSYISISAFIIVGFLAFPAIFINQNVFHYTAHLEERNFYKAQTIFGALHALQTFSQLCYFNFT-------TRVI-----
    Cucsa.165600.1_CUCSA TIE------------------------------------------------------------------------------AATIYGALRGLETFSQLCTFNYE-------TKDV-----
    Cre22.g762950.t1.1_C HIR------------------------------------------------------------------------------AATQWGALHALETLSQLVVEVEGPAVAAGAGAAVAAVVA
    Bradi2g37460.1_BRADI TIE------------------------------------------------------------------------------ANTIYGAIRGLETFSQLCVFNYD-------TKNV-----
    Glyma02g10570.1_GLYM TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCSFDYT-------TKTV-----
    Selmo_422155_SELMO   FLQ------------------------------------------------------------------------------ANTVYGALRGLETFSQICRYNVE-------AKTI-----
    47890.m000013_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM TLT------------------------------------------------------------------------------AKTTWGAMRGLETFSQLAWG----------NPT------
    GSVIVP00009338001_VI HIE------------------------------------------------------------------------------AQTVYGVLHGLQTFSQLCRFNLT-------NRAI-----
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C HLS------------------------------------------------------------------------------AATVWGAMRGLETFSQVVWG----------NPS------
    MDP0000129369_MALDO  NLR------------------------------------------------------------------------------AQTA-----------------------------------
    GSMUA_Achr11T11230_0 RIE------------------------------------------------------------------------------AQTVYGALHALQTFSQLCHFNIY-------KRIV-----
    GSVIVP00003707001_VI NLT------------------------------------------------------------------------------AATVWGAMRGLETFSQIVWG----------DPL------
    Sb01g042640.1_SORBI  DIS------------------------------------------------------------------------------AATPWGVIRGLETFSQLAWSSSAAAAG---GQP------
    GSMUA_Achr5T28320_00 AIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCTPNTE-------NKTV-----
    At1g65590.1_ARATH    QLE------------------------------------------------------------------------------AKSVYGALHGLQTFSQLCHFNLK-------KKVI-----
    Selmo_445016_SELMO   LLT------------------------------------------------------------------------------AETVYGALHGLETFSQICAFNFT-------TKMT-----
    Selmo_429325_SELMO   LLQ------------------------------------------------------------------------------------------TFSQICTYNAV-------ERAV-----
    Tc05_g015670_THECC   HLV------------------------------------------------------------------------------APTVYGALHGLQTFSQLCHFNFT-------SRVI-----
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  LLE------------------------------------------------------------------------------AQTIYGALHGLQTFSQLCHFNFK-------TSVI-----
    Selmo_422260_SELMO   LLT------------------------------------------------------------------------------AETVYGALHGLETFSQICAFNFT-------TKMT-----
    Bradi2g57420.1_BRADI QVE------------------------------------------------------------------------------AQTVYGALHALQTFGQLCYFDFT-------SRLI-----
    GRMZM2G117405_P01_ZE QIQ------------------------------------------------------------------------------AQTVFGALQALQVLSTSCGS-------------------
    Medtr2g062560.1_MEDT TLT------------------------------------------------------------------------------AVTSWGAMHGLETFSQLAWG----------NPT------
    Os07g38790.1_ORYSA   TVT------------------------------------------------------------------------------AATAWGAMRGLETFSQLAWWCGRE------RAV------
    Glyma10g43710.1_GLYM TIE------------------------------------------------------------------------------ANTVFGALRGLETFSQLCSFDYT-------TKTV-----
    Glyma08g16970.1_GLYM TLT------------------------------------------------------------------------------AKTVWGAMRGLETFSQLAWG----------HPT------
    Sb09g001670.1_SORBI  IIE------------------------------------------------------------------------------ANTIYGAIRGLETFSQLCVFNYD-------TKNI-----
    Os05g02510.1_ORYSA   TIE------------------------------------------------------------------------------ANTIYGAIRGLETFSQLCVFNYD-------TKNV-----
    Bradi3g44610.1_BRADI QIE------------------------------------------------------------------------------AQTVFGALHALETISQLCYFDFV-------LSIT-----
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  TIV------------------------------------------------------------------------------GNSAAGVAYGLQSLRDLLPLPGAAPHG------------
    Phypa_128384_PHYPA   YLE------------------------------------------------------------------------------ALTVYGALRGLETFSQLTSYNFT-------SKSV-----
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  NLW------------------------------------------------------------------------------AQTAWGAMRGLETLSQLVWG----------DPS------
    GRMZM5G860235_P01_ZE TVT------------------------------------------------------------------------------AATAWGAMRGLETFSQLSWRAGRG------DLL------
    At1g05590.1_ARATH    HLL------------------------------------------------------------------------------AHSAWGAMRGLETFSQMIWG----------TSPD-----
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ---------------------------------------------------------------------------------ANTIYGAMRGLETFSQLCILNYE-------TKTV-----
    PDK_30s998691g002_PH NLA------------------------------------------------------------------------------AITVWGAMRGLETFSQLSWG----------DPP------
    At3g55260.1_ARATH    TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCAFDYI-------TKSV-----
    MDP0000798095_MALDO  TIE------------------------------------------------------------------------------ANTVYGALRALETFSQLCTFDYG-------SKSV-----
    Glyma18g52290.1_GLYM TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCSFDYT-------TKTV-----
    GSMUA_AchrUn_randomT ----------------------------------------------------------------------------------------------LPTLCNFFYR----------------
    Cucsa.177460.1_CUCSA SLI------------------------------------------------------------------------------AETTWGAMRGLETFSQLVWG----------DPL------
    GSVIVP00009337001_VI ---------------------------------------------------------------------------------TGVLWKLLFAFFKVVPLCSCE------------------
    POPTR_0008s07890.1_P HLE------------------------------------------------------------------------------AQTVYGALHGLQTFSQLCHFNFT-------TRLI-----
    Glyma20g38400.1_GLYM TIE------------------------------------------------------------------------------ANTVFGALRGLETFSQLCSFDYT-------TKTV-----
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCTFDYG-------NKSV-----
    Tc05_g024510_THECC   YLT------------------------------------------------------------------------------AATAWGAMRGLETFSQMVWG----------DPS------
    cassava4.1_007813m_M ----------------------------------------------------------------------------------------MRGLETFFQLVWG----------DPS------
    Bradi1g23740.1_BRADI TLT------------------------------------------------------------------------------ASTAWGAMRGLETFSQLTWRAGSTKA----EQL------
    Cucsa.178740.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   -----------------------------------------------------------------------------------------GPYEDSSQICTYNAV-------ERAV-----
    Os05g34320.1_ORYSA   QIE------------------------------------------------------------------------------AQTVFGALHALETFSQLCNFDFT-------SRLI-----
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 ELS------------------------------------------------------------------------------AATPWGAMRGLETLSQLAWG----------NPP------
    Sb02g037280.1_SORBI  TVT------------------------------------------------------------------------------AVTAWGAMRGLETFSQLSWRAGGRGRSRSRDLL------
    Selmo_422139_SELMO   LLQ------------------------------------------------------------------------------ARTVYGALRGLETFSQICSYDVL-------AREI-----
    POPTR_0001s23930.1_P NLT------------------------------------------------------------------------------AETVWGAMRGLETFSQLVWGL---------KPL------
    GRMZM2G034598_P01_ZE IIE------------------------------------------------------------------------------ANTIYGAIRGLETFSQLCVFNYD-------TKNV-----
    cassava4.1_023099m_M QLE------------------------------------------------------------------------------ARTVYGALHGLQTFSQLCRFNFD-------ARVI-----
    29616.m000216_RICCO  TII------------------------------------------------------------------------------ADTVWGAMRGLETFSQLVWG----------NPS------
    cassava4.1_004406m_M NLT------------------------------------------------------------------------------AETVWGAMRGLETFSQLVWG----------NPS------
    GRMZM2G134251_P01_ZE DIS------------------------------------------------------------------------------AATPWGIIRGLETFSQLAWSSGAADAS---GQP------
    POPTR_0010s21790.1_P YIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCAFDYE-------TKAV-----
    Bradi2g25310.1_BRADI QIE------------------------------------------------------------------------------AQTVFGALHALETFSQLCYFDFV-------LRVT-----
    Sb09g020420.1_SORBI  QIE------------------------------------------------------------------------------AQTVYGALHALETFSQLCNFDFN-------ANLI-----
    Phypa_90762_PHYPA    FWQ------------------------------------------------------------------------------APTIYGALRGHEVTGWNVCLSRE----------------
    POPTR_0001s23910.1_P NLT------------------------------------------------------------------------------AETVWGAMRGLETFSQLVWGL---------KPL------
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCAFDYG-------TKTV-----
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   QIE------------------------------------------------------------------------------AQTVFGALHALQTFSQLCYFDFT-------SKLI-----
    Tc00_g000370_THECC   TIE------------------------------------------------------------------------------ANTVYGALRGLETFSQLCAFDYG-------TKSV-----
    Bradi1g69660.1_BRADI DIS------------------------------------------------------------------------------AATTWGAIRGLETFSQLAWAGGGPAAA---GQP------
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   DIS------------------------------------------------------------------------------AATPWGAIRGLETFSQLAWAGGGAASG---GQP------
    GSVIVP00007781001_VI HIE------------------------------------------------------------------------------AQTVYGVLHGLQTFSQLCRFNLT-------NRAI-----
    Selmo_117332_SELMO   ---------------------------------------------------------------------------------------------TFSQICTYDAV-------ERAV-----
    Glyma08g17200.1_GLYM TLT------------------------------------------------------------------------------AKTTWGAMRGLETFSQLAWG----------NPT------
    supercontig_88.31_CA ----------------------------------------------------------------------------------------------------------------TTI-----
    Selmo_429308_SELMO   LLQ------------------------------------------------------------------------------------------TFSQICTYDAV-------ERAV-----
    GRMZM2G121514_P01_ZE QIE------------------------------------------------------------------------------AQTVYGALHALETFSQLCSFDFN-------ANLI-----
    Selmo_441789_SELMO   SIV------------------------------------------------------------------------------SNTTWGALHGLETFSQLVQFDSQA------RKL------
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ---------------------------------------------------------------------------------------ALRNYSYFHR-----------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                370       380       390       400       410       420       430       440       450       460       470       480
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P -----------------------------------ELHLAPWTIFDQPRFSYRGLLI-------DTSRHYLPVPVIKDVIDSMTYSKL---NVLHWH-----IVDKQSFPL----EIPSY
    Cucsa.165600.1_CUCSA -----------------------------------QIYQAPWYIKDNPRFAFRGLLI-------DTSRHFLPVDVIKNIIESMAFAKL---NVLHWH-----IVDEESFPL----EVPSY
    Cre22.g762950.t1.1_C VAEGAAAAAAGGRKAALQPKGNKGELLQPHEMLQPQLALVVANVSDWPRFPHRGLLL-------DTARHFLPLPALRAAVVALAAVKM---NTLHWH-----AVDDQSFPLAAVAEAAGL
    Bradi2g37460.1_BRADI -----------------------------------EVHNAPWYIQDEPRFAFRGLLL-------DTSRHYLPVDVIKQVIDSMSFAKL---NVLHWH-----IIDEQSFPL----EIPSY
    Glyma02g10570.1_GLYM -----------------------------------KIYKAPWSIQDKPRFAYRGLML-------DTSRHYLPINVIKQIIESMSYAKL---NVLHWH-----IIDEQSFPL----EVPTY
    Selmo_422155_SELMO   -----------------------------------FLENCPWDIFDEPRFLYRGLLI-------DTARHYLPLNTIKTIIDSMAYAKL---NVLHWH-----ISDDESFPL----EIPSF
    47890.m000013_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM ------------------------------------WIAVGVQVLDSPLYAHRGIML-------DTSRNYFPVKDLLRTVEAMSMNKL---NVFHWH----------SFPL----VLPLE
    GSVIVP00009338001_VI -----------------------------------EVHQVPWYIIDQPRFFYRGLLI------VPNSKKFSPMSLFMELISHDMIMLF---SIFHFLKPGSVVSGMAASPV----RYSSF
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C ------------------------------------RVAAGLSVWDSPIFGHRGIML-------DTSRNYYGVGDILRVIEGMSWNKM---NVFHWH-----ITDSHSFPL----VLPLE
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 -----------------------------------ELQLAPWYILDQPRFPYRGLLI-------DTSRHYLPLPIIKGVIDSMAYSKL---NVLHWH-----IVDKQSFPL----EIPSY
    GSVIVP00003707001_VI ------------------------------------RVATGLFVWDSPLFGHRGVML-------DTSRNYYGVEDILRTIGAMSANKL---NVFHWH-----ITDSHSFPL----LLPSE
    Sb01g042640.1_SORBI  ------------------------------------IVPSDLEISDHPLFTHRGVLL-------DTARNYYPVGDILRTIRAMAANKL---N----------------------------
    GSMUA_Achr5T28320_00 -----------------------------------EIQKAPWYIEDEPRFSFRGLLI-------DTSRHYLPVNVIKQVIDAMSYAKL---NVLHWH-----IVDEQSFPL----EVPSY
    At1g65590.1_ARATH    -----------------------------------EILMTPWNIIDQPRFSYRGLLI-------DTSRHYLPLPVIKNVIDSMTYAKL---NVLHWH-----IVDTQSFPL----EIPSY
    Selmo_445016_SELMO   -----------------------------------EVRYIPVDIVDRPRFEYRGLLI-------DTSRHYEPLKIVRSVIDSMAYAKL---NVLHWH-----IVDTQSFPL----EIPSF
    Selmo_429325_SELMO   -----------------------------------LLQGCPWNIFDEPRFSYRGLLI-------DTARHYLPLKTIENVIDSMAYAKL---NVLHWH-----VVDEESFPL----EIPSF
    Tc05_g015670_THECC   -----------------------------------EVHMSPWTIIDQPRFSYRGLLIGAMLHFYNTSRHYLPLPVIRKVIDSMTYAKL---NVLHWH-----IVDTQSFPL----EIPSY
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  -----------------------------------EVRMVPWTIIDQPRFSYRGLLI-------DTSRHYQPLPMIKKVIDSMAYAKL---NVLHWH-----IVDTQSFPL----EIPSY
    Selmo_422260_SELMO   -----------------------------------EVRYIPVDIVDRPRFEYRGLLI-------DTSRHYEPLKIVRSVIDSMAYAKL---NVLHWH-----IVDTQSFPL----EIPSF
    Bradi2g57420.1_BRADI -----------------------------------ELNSAPWMITDAPRFPYRGLLI-------DTSRHYLPLTTIKGVIDAMTYSKL---NVLHWH-----IIDEQSFPI----EIPSY
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ------------------------------------RVAVNVRVNDAPLFGHRGIML-------DTSRNYYPVKDLLRTIEAMSMNKL---NVFHWH-----VTDSHSFPL----ILPSE
    Os07g38790.1_ORYSA   ------------------------------------LVAAGVRVEDRPLYPHRGLML-------DTGRTYFPVADILRTIDAMAANKM---NVFHWH-----ITDSQSFPL----ELPSE
    Glyma10g43710.1_GLYM -----------------------------------QIYKAPWSILDKPRFPYRGLML-------DTSRHYLPVDVIKQIIESMSYAKL---NVLHWH-----IIDEQSFPL----EVPTY
    Glyma08g16970.1_GLYM ------------------------------------QVPVGVHVCDSPLYAHRGVMV-------DTARNYYPVKDLMRTVKALSMNKL---NVLHLH-----LTDAESFPL----VLPSE
    Sb09g001670.1_SORBI  -----------------------------------EVRNAPWHIQDEPRFAFRGLLL-------DTSRHYLPVDVIKQVIDSMSFAKL---NVLHWH-----IIDEESFPL----EVPTY
    Os05g02510.1_ORYSA   -----------------------------------EVRHAPWYIEDEPRFAFRGLLL-------DTSRHFLPVDVIKQVIDSMSFSKL---NVLHWH-----IIDEQSFPL----EVPSY
    Bradi3g44610.1_BRADI -----------------------------------RLDSAPWTIMDMPRFPYRGLLI-------DTARHYLPVPVIKSVIDSMTYSKL---NVLHWH-----IVDEQSFPI----EIHSY
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  ------------------------------------IDLPRLHIVDAPRFDYRGFQL-------DVARNFHTRQTVFKWLDLMARYKL---NKFHFH-----LTDDEGWRL----EIPGL
    Phypa_128384_PHYPA   -----------------------------------QIRRTPCFIKDFPRFPYRGLLI-------DTSRHYQPVTSIKRVLDSMAYSKL---NVLHWH-----IVDEQSFPI----EIPSY
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------------------------------------LVAVGVYVWDSPLFGHRGVML-------DTSRNFYGVEDILRTIEAMSANKL---NVFHWH-----ITDSHSFPL----LLPSE
    GRMZM5G860235_P01_ZE ------------------------------------LVAAGVRVEDRPLYPHRGLML-------DTGRTYFPVADILRTIDAMAANKM---NVFHWH-----ITDSQSFPI----VLPSE
    At1g05590.1_ARATH    -----------------------------------LCLPVGIYIQDSPLFGHRGVLL-------DTSRNYYGVDDIMRTIKAMSANKL---NVFHWH-----ITDSQSFPL----VLPSE
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH -----------------------------------EVYKAPWYIQDEPRFAFRGLLL-------DTSRHYLPLSVIKQVIDSISYAKM---NVLHWH-----IIDEQSFPL----EVPSF
    PDK_30s998691g002_PH ------------------------------------VIAADVYVADRPIFPHRGVML-------DTSRNYYPVEDIMRTIEAMGANKL---NVFHWH-----ITDSHSFPL----LLPSE
    At3g55260.1_ARATH    -----------------------------------QIYKAPWYIQDKPRFGYRGLLI-------DTSRHYLPIDVIKQIIESMSFAKL---NVLHWH-----IVDEQSFPL----ETPTY
    MDP0000798095_MALDO  -----------------------------------QVNKAPWYIKDSPRFAYRGLLI-------DTSRHYLPIEVIKQVIQSMSYAKL---NVLHWH-----VIDRESFPL----EVPSY
    Glyma18g52290.1_GLYM -----------------------------------KIYKAPWSIQDKPRFAYRGLML-------DTSRHYLPIDVIKQIIESMSYAKL---NVLHWH-----IIDEQSFPL----EIPTY
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA ------------------------------------RVPVGLSLGDAPLFQHRGLML-------DTSRNYYGVEHILRTIEAMSMNKL---NVFHWH-----ITDSHSFPL----VVPSE
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P -----------------------------------EVHMVPWTIIDQPRFSYRGLLI-------DTSRHYQPVPMIKKVIDSMAYAKL---NVLHWH-----IVDTQSFPL----EIPSY
    Glyma20g38400.1_GLYM -----------------------------------QIYKAPWSIRDKPRFPYRGLML-------DTSRHYLPVDVIKQIIESMSYAKL---NVLHWH-----IIDEQSFPL----EVPTY
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M -----------------------------------QIYKAPWYIRDRPRFSYRGLLL-------DTSRHYLPVDVIKQIIESMSYAKL---NVLHWH-----IIDEESFPL----EIPSY
    Tc05_g024510_THECC   ------------------------------------VVPVGVYVWDAPLFAHRGVML-------DTSRNYYAVEDILRTIGAMSANKL---NVFHWH-----ITDSHSFPL----MVPSE
    cassava4.1_007813m_M ------------------------------------RVPVGLYLWDSPLFAHRGVML-------DTSRNYYAVEDLLRTIGAMSANKL---NVFHWH-----ITDSHSFPL----VLPSV
    Bradi1g23740.1_BRADI ------------------------------------VVAAGVRVEDRPLYQHRGLML-------DTGRTYFPVADILRTIDAMAGNKM---NVFHWH-----ITDSQSFPI----ELPSE
    Cucsa.178740.1_CUCSA ----------------------------------------------------------------------------------MAYAKL---NVLHWH-----IVDTQSFPL----EMPSF
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   -----------------------------------LLQGCPWNIFDEPRFSYRGLLI-------GCL--------------ALACCRR---GVL-------------PFGD----SIVS-
    Os05g34320.1_ORYSA   -----------------------------------ELQSAPWSITDMPRFPYRGLLI-------DTSRHYLPVPVIKSVIDSMTYSKL---NVLHWH-----IVDEQSFPI----EIPSY
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 ------------------------------------AVAAGIRIEDRPLFPHRGLLL-------DTSRNFYPVRDILRTIRAMSHNKL---NVFHWH-----ITDSQSFPL----LLPSA
    Sb02g037280.1_SORBI  ------------------------------------LVAAGVRVEDRPLYPHRGLML-------DTGRTYFPVSDILRTIDAMAANKM---NVFHWH-----ITDSQSFPI----VLPSE
    Selmo_422139_SELMO   -----------------------------------LVQDCPWDILDEPRFFYRGLLI-------DTARHYLPLKTIENVIDSMAYAKL---NVLHWH-----VVDEESFPL----EIPSF
    POPTR_0001s23930.1_P ------------------------------------LVPVGLDVWDSPLFEHRGIML-------DTSRNYYPVDDILRTIKAMSANKL---NVFHWH-----ITDSHSFPL----VLPSE
    GRMZM2G034598_P01_ZE -----------------------------------EVHNAPWHIQDEPRFAFRGLLL-------DTSRHYLPVDVIKQVIDSMSFAKL---NVLHWH-----IIDEQSFPL----EVPTY
    cassava4.1_023099m_M -----------------------------------EILMVPWTIIDKPRFSYRGLLI-------DTSRHYQPLPMIKKVIDSMVYVKL---NVLHWH-----IVDTQSFPL----EIPSY
    29616.m000216_RICCO  ------------------------------------RVPVGVYVWDAPLFGHRGLML-------DTSRNYYPVSDIMRTISAMSANKL---NIFHWH-----ITDSHSFPM----VFPSE
    cassava4.1_004406m_M ------------------------------------RVPVGLYLWDSPLFPHRGIML-------DTSRNYYPVKDLLRTIGAMSANKL---NVFHWH-----ITDSHSFPL----VLPSM
    GRMZM2G134251_P01_ZE ------------------------------------IVPSEIEISDHPLFTHRGILL-------DTARNYYPVRDILRTIRAMASNKL---NVFHWH-----ITDSQSFPI----VLPSV
    POPTR_0010s21790.1_P -----------------------------------QIYRAPWYILDKPRFAYRGLLL-------DTSRHYLPIGVIKQIIESMSYAKL---NVLHWH-----IIDEESFPL----EVPSY
    Bradi2g25310.1_BRADI -----------------------------------GLHSAPWTIMDMSRFPYRGLLI-------DTARHYLPVPVIKSVIDSMTYSKL---NVLHWH-----IVDEQSFPL----EIPSY
    Sb09g020420.1_SORBI  -----------------------------------ELQSAPWTILDAPRFPYRGLLI-------DTSRHYLPVPVIKSVIDSMTFSKL---NVLHWH-----IVDEQSFPL----QIPSY
    Phypa_90762_PHYPA    ----------------------------------------------------KGVQV-------HTKR----------------------------------------------------
    POPTR_0001s23910.1_P ------------------------------------LVPVGLDVWDSPLFEHRGIIL-------DTSRNYYPVDDILRTIKAMSANKL---NVFHWH-----ITDSHSFPL----VLPSE
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI -----------------------------------QVYNAPWYIQDKPRFVYRGLML-------DTSRHYLPIDVIKHVIESMSYAKL---NVLHWH-----IIDEQSFPL----EVPTY
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   -----------------------------------ELISAPWRISDTPRFPYRGLLI-------DTSRHYLPVTVIKKVIDTMAYSKL---NVLHWH-----IVDAQSFPI----EIPSY
    Tc00_g000370_THECC   -----------------------------------QVYKAPWYIQDKPRFAYRGLLL-------DTSRHYLPIDVIKQIIESMSYAKL---NVLHWH-----IIDEQSFPL----EVPTY
    Bradi1g69660.1_BRADI ------------------------------------IVPSGIEISDRPHFTHRGILL-------DTARNYYPVRDILHTIRAMAFNKL---NVFHWH-----ITDSQSFPI----VLPTV
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   ------------------------------------IVPSGIEISDRPHFTHRGILL-------DTARNFYPVRDILHTLRAMAFNKL---NVFHWH-----ITDAQSFPI----VLPTV
    GSVIVP00007781001_VI -----------------------------------EVHQVPWYIIDQPRFFYRGLLI-------DTSRHYLPLPIIKNVIDSMTYAKL---NVLHWH-----IVDTQSFPL----EIPSF
    Selmo_117332_SELMO   -----------------------------------LLQGCPWNIFDEPRFSYRGLLI-------DTARHYLPLKTIENVIDSMAYAKL---NVLHWH-----VVDEESFPL----EIPSF
    Glyma08g17200.1_GLYM ------------------------------------CVAVGVHLWDSPLYAHRGIML-------DTSRNYFPVKDLLRTVEAMSMNKL---NVFHWH-----VTDSQSFPL----VLPSE
    supercontig_88.31_CA -----------------------------------KVGMTPWNIIDKPRFPYRGLLI-------DTSRHYLPLPVLKNVIDSMTYAKLVLASSRHSS-----FKDKHA--R----HVSSS
    Selmo_429308_SELMO   -----------------------------------LLQGCPWNIFDEPRFSYRGLLI-------DTARHYLPLKTIENVIDSMAYAKL---NVLHWH-----VVDEESFPL----EIPSF
    GRMZM2G121514_P01_ZE -----------------------------------ELHSAPWTILDAPRFPYRGLLI-------DTSRHYLPVPVIKGVIDSMTFSKL---NVLHWH-----IVDEQSFPL----EISSY
    Selmo_441789_SELMO   ------------------------------------FISYGVRITDWPLYSHRGLLL-------DTSRNFFPVKDILRTIQALSYNKL---NVFHWH-----ISDSHSFPL----LLESE
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                490       500       510       520       530       540       550       560       570       580       590       600
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P PRL-WNGAY------------------------SYTERYTMADAREIVQ------------Y----------------A-ERRGINVL-AEIDVPGHALSCA------------------
    Cucsa.165600.1_CUCSA PNL-WRGAY------------------------TKHERYTIEDAYEIVA------------F----------------A-KMRGINVM-AEVDVPGHAESWGIGYPDL------------
    Cre22.g762950.t1.1_C PDLAARGAF------------------------GPRMSYSRQDVESLVV------------Y----------------A-AARGVRVL-LELDTPGHARSWGAGLPGLLSDCGGAGG---
    Bradi2g37460.1_BRADI PNL-WKGSY------------------------SKLERYTVEDAHYIVS------------Y----------------A-KKRGIHVM-AEIDVPGHGESWGNGYPKL------------
    Glyma02g10570.1_GLYM PNL-WKGSY------------------------TKWERYTVEDAYEIVN------------F----------------A-KMRGINVM-AEVDVPGHAESWGAGYPDL------------
    Selmo_422155_SELMO   PKL-WNGSY------------------------SNKQRYSLDHAKDLVK------------Y----------------A-ELRGISIM-AEIDVPGHARSWGVGYPQL------------
    47890.m000013_RICCO  ----------------------------------------------------------------------------------------------PAHITSAIAAYPWLASRPNPPAAPAS
    Glyma15g41990.1_GLYM PALAEKGAY------------------------SSHMVYSPEDVKRVVE------------FVSLFSPLFFYNFLHKTN-IDDGVRVM-PEIDSPGHTGSWALAYPEIVTCANMFWW-PA
    GSVIVP00009338001_VI PLPQMNSN-------------------------TDFRRKSFRR-----------------------------------------------------------------------------
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M -----------------------------------------------------------------------------------------------------GRGYPSL------------
    supercontig_197.23_C PELAAKGSY------------------------GSDMIYSPDDVSRIVE------------F----------------G-LDHGVRVL-PEIDSPGHTGSWAEAYPEIVTCANMFWW-PA
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 PRL-WAGAY------------------------SYSERYTKADALEIVQ------------Y----------------A-ERRGVNVL-AEIDVPGHALSWGVGYPDL------------
    GSVIVP00003707001_VI PDLAGKGSY------------------------GPQMQYSPEDVKKIVE------------F----------------G-LEHGVRVL-PEIDSPGHTGSWAEAYPEIVTCANMFWW-PA
    Sb01g042640.1_SORBI  ------------------------------------------DVRRIVR------------F----------------A-ESFGIRVI-PEIDMPGHTGSWAAAYPEIVTCANKFWA-PK
    GSMUA_Achr5T28320_00 PNL-WKGAY------------------------SKLERYTVEDAYEVVD------------F----------------A-KKRGIHIM-AEVDVPGHGESWGAGYPDL------------
    At1g65590.1_ARATH    PKL-WNGAY------------------------SSSQRYTFEDAAEIVN------------Y----------------A-RRRGIHVL-AEIDVPGHALSWGKGYPAL------------
    Selmo_445016_SELMO   PKL-WNGAY------------------------TGAERYTLEDAKGIVE------------Y----------------A-RLRGINVM-PELDVPGHAASWGVGYPEL------------
    Selmo_429325_SELMO   PEL-WKGSY------------------------SISQRYNLDDAKAIVK------------Y----------------A-RLRGIHVM-PEIDIPGHARSWELDILSY------------
    Tc05_g015670_THECC   PKL-WNGAY------------------------STSEQYSVADAAEIVS------------F----------------A-QKRGINVL-AEIDVPGHALSWGTGYPSL------------
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  PKL-WNGAY------------------------SVSERYTFADAAEIVS------------Y----------------A-ERQGIHIL-AEIDVPGHALSWGKGYPSL------------
    Selmo_422260_SELMO   PKL-WNGAY------------------------TGAERYTLEDAKGIVE----------------------------------------------------GVGYPEL------------
    Bradi2g57420.1_BRADI PKL-WNGSY------------------------SYSERYTMSDAVDIVR------------Y----------------A-EKRGVNVL-AEIDVPGHALSWGVGYPSL------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT PMLAEKGAY------------------------DVDMVYTVDDVKRVVE------------F----------------G-LDRGVRVI-PEIDAPGHTGSWALAYPDIVACANMFWW-PA
    Os07g38790.1_ORYSA   PALAEKGSY------------------------GDGMRYTVDDVKLIVD------------F----------------A-MNRGVRVV-PEIDTPGHTASWAGAYPELVSCAGEFWL-PD
    Glyma10g43710.1_GLYM PNL-WKGSY------------------------TKWERYTVEDAYEIVN------------F----------------S-KMRGINVM-AEVDVPGHAASWGIGYPDL------------
    Glyma08g16970.1_GLYM PALAEKGAY------------------------APHMVYSPKDVKKLVE------------F----------------G-LDHGVRII-PEIDTPGHTASWALAHPDIVTCANMFWW-PA
    Sb09g001670.1_SORBI  PNL-WKGSY------------------------SKWERYTVEDARDIVN------------Y----------------A-KKRGINVM-AEIDVPGHAESWGNGYPKL------------
    Os05g02510.1_ORYSA   PKL-WKGSY------------------------SKLERYTVEDARDIVS------------Y----------------A-RKRGIHVM-AEIDVPGHAESWGKGYPKL------------
    Bradi3g44610.1_BRADI PEL-SNGAY------------------------SYSEKYTISDALDIVQ------------Y----------------A-EKRGVNVL-AEIDIPGHARSWGVGYPSL------------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI -----------------------------------------------------------------------------------------------------GTGYPSL------------
    34575.m000024_RICCO  PELTSIGAVRGHSARPGVRLQPAYGSGPDPKDASGSGYYTRADYIEILR-----------------------------YAAARHIDVI-PEIEMPGHARAAVQSMEARYRRLKAAGRPDA
    Phypa_128384_PHYPA   PLL-WNGAY------------------------SYAERYTMDDAREIVE------------Y----------------A-RLRGINVM-PELDVPGHAASWGVGYPEL------------
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  PDLASKGSY------------------------GSAMQYSPADVTKIVE------------F----------------G-LEHAVRVV-PEIDAPGHTGSWAEAYPEIVTCANMFWW-PD
    GRMZM5G860235_P01_ZE PSLAEKGAY------------------------GENMRYTVEDVERIVE------------F----------------A-MSRGVRVV-PEIDSPGHTASWAGAYPEAVTCAGKFWL-PD
    At1g05590.1_ARATH    PSLAAKGSL------------------------GPDMVYTPEDVSKIVQ------------Y----------------G-FEHGVRVL-PEIDTPGHTGSWGEAYPEIVTCANMFWW-PA
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH PDL-WKGSY------------------------TKWERYTVEDAYEVVE------------Y----------------V-IC--IHIM-AEIDVPGHAESWGVGYPNL------------
    PDK_30s998691g002_PH PDLAEKGSY------------------------GPDMRYTPEDVKAIVE------------F----------------G-MSRGVRVL-PEIDAPGHTGSWAGAYPEIVTCANMFWL-PN
    At3g55260.1_ARATH    PNL-WKGAY------------------------SRWERYTVEDASEIVR------------F----------------A-KMRGINVM-AEVDVPGHAESWGTGYPDL------------
    MDP0000798095_MALDO  PKL-WNGAY------------------------TKWERYTVEDAIEIVN------------F----------------A-KTRGINVM-AEVDVPGHAESWGTGYPDL------------
    Glyma18g52290.1_GLYM PNL-WKGSY------------------------TKWERYTVEDAYEIVS------------F----------------A-KMRGINVM-AEVDVPGHAESWGAGYPDL------------
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA PELAAKGAY------------------------GDDMQYSPEDVRRIVK------------F----------------G-MEHGVRVF-PEIDSPGHTGSWALAYPEIVACANMFWL-PA
    GSVIVP00009337001_VI --------------------------------------------------------------------------------LLRGLDCSGSNLFLAGNTLCLGTGYPSL------------
    POPTR_0008s07890.1_P PHL-WDGAY------------------------SVSERYTFSDAAEIVR------------Q----------------VILLRGINVL-AELDVPGHALSWGHGYPSL------------
    Glyma20g38400.1_GLYM PNL-WKGSY------------------------TEWERYTVEDAYEIVN------------F----------------S-KMRGINVM-AEVDIPGHAASWGVGYPNL------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M PKL-WEGSY------------------------TKWERYTVEGAYEIVN------------F----------------A-KMRGINVL-AEIDVPGHAESWGAGYPDL------------
    Tc05_g024510_THECC   PELAAKGSY------------------------GPDMIYSPSDVARIVQ------------F----------------G-LEHGVRVL-PEIDSPGHTGSWTEAYPEIVACANMFWW-PA
    cassava4.1_007813m_M PELAAKGSY------------------------GPNMQYSPVDVATIVQ------------F----------------G-LEHGVRVI-PEIDTPGHTGSWAEAYPDIVTCAGMFWW-PA
    Bradi1g23740.1_BRADI PALAEKGAY------------------------GDDMRYTVEDVTRIVE------------F----------------A-MSRGVRVV-PEIDAPGHTASWAGAYPEVVSCAGKFWL-PD
    Cucsa.178740.1_CUCSA PNL-WFGAY------------------------SKQERYTIADATEIVR------------Y----------------A-QRRGVSVL-AEVDVPGHALSWGVGYPAL------------
    28180.m000376_RICCO  ----------------------------------------------------------------------------------AGINVM-AEVDVPGHAESWGTGYPDL------------
    Selmo_422160_SELMO   -----KGSY------------------------SISQRYNLDDAKAIVK------------Y----------------A-RLRGIHVM-PEIDVPGHARSWGVGYPEL------------
    Os05g34320.1_ORYSA   PKL-WNGAY------------------------SYSERYTMDDAIDIVQ------------Y----------------A-ERRGVNVL-AEIDVPGHALSWGVGYPSL------------
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 PQLALRGSY------------------------GPDMRYTPADVRRVVR------------Y----------------A-MNRGIRVI-PEIDAPGHTASWAEAYPEIVTCANKFWS-PP
    Sb02g037280.1_SORBI  PSLAEKGAY------------------------GEDMVYTVEDVKRIVE------------F----------------A-MSRGVRVV-PEIDSPGHTASWAGAYPEAVTCAGKFWL-PD
    Selmo_422139_SELMO   PEL-WKGSF------------------------SITQRYNLDDAKAIVE------------Y----------------A-RLRGVHVM-PEIDVPGHARSWGVGYPEL------------
    POPTR_0001s23930.1_P PALADKGSY------------------------GNDMLYSPADVATIVR------------F----------------G-LEHGVRVL-PEIDSPAHTGSWAEAYPDIVTCANMFWW-PA
    GRMZM2G034598_P01_ZE PNL-WKGSY------------------------SKWERYTVEDAHDIVN------------Y----------------A-KKRGINVM-AEIDVPGHAESWGNGYPKL------------
    cassava4.1_023099m_M PKL-WDGAY------------------------SYSERYTFADAAEIVS------------Y----------------A-QRRGINVL-AEIDVPGHALS--------------------
    29616.m000216_RICCO  PGLAEKGSY------------------------GNNMRYTPEDVADVVK------------F----------------G-LEHGVRVL-AEIDSPAHTGSWAGAYPDLVTCANMFWW-PA
    cassava4.1_004406m_M PELAAKGSY------------------------GPTMQYSPADVAAIVR------------F----------------G-LEHGVRVL-PEIDSPGHTGSWAEAYPDIVTCANMFWW-PA
    GRMZM2G134251_P01_ZE PNLANFGSY------------------------SPVMRYTDQDVRRIVR------------Y----------------A-GAFGIRVI-PEIDMPGHTGSWAGAYPEIVTCANKFWA-PT
    POPTR_0010s21790.1_P PNL-WKGSY------------------------TKWERYTFEDAYEIVD------------F----------------A-KMRGINVM-AEIDVPGHAESWGTGYPDL------------
    Bradi2g25310.1_BRADI PKL-SNGAY------------------------SYSEKYTINDALDIVQ------------Y----------------A-EKRGVNVL-AEIDVPGHARSWGVGYPSL------------
    Sb09g020420.1_SORBI  PKL-WNGAY------------------------SYSERYTFDDAIDIVQ------------Y----------------A-EKRGVNVL-AEIDVPGHALSWGVGYPSL------------
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P PALADKGSY------------------------GNDMLYSPADVATIVR------------F----------------G-LEHGVRVL-PEIDSPAHTGSWAEAYPDIVTCANMFWW-PA
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI PKL-WKGAY------------------------TKWERYTVEDAYDIVN------------F----------------A-KMRGINVM-AEIDIPGHAESWGTGYPDL------------
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------NDQLNSNTASPGHS----------------------
    Os01g66700.1_ORYSA   PKL-WNGSY------------------------SFSERYTTSDAVDIVR------------Y----------------A-ENRGVNVM-AEIDVPGHALSWGVGYPSL------------
    Tc00_g000370_THECC   PDL-WKGSY------------------------TKWERYTVEDASEIVS------------F----------------A-KMRGIHVM-AEVDVPGHAESWGAGYPDL------------
    Bradi1g69660.1_BRADI PNLAHHGSY------------------------SPAMRYTDKDVHRIVN------------Y----------------A-AAFGVRVI-PEIDMPGHAGSWAGAYPDIVTCANKFWA-PT
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   PNLANSGSY------------------------SPTMRYTENDVRHIVS------------F----------------A-ASFGIRVI-PEIDMPGHTGSWAGAYPEIVTCANRFWA-PH
    GSVIVP00007781001_VI PKL-WNGAY------------------------SISERYTMADAAEIVR------------Q----------------L-CSKTRN----------------------------------
    Selmo_117332_SELMO   PEL-WKGSY------------------------SISQRYNLDDAKAIVKEHKYPMLLFLYRY----------------A-RLRGIHVM-PEIDVPGHARSWGVGYPAL------------
    Glyma08g17200.1_GLYM PALAEKGAY------------------------ASHMVYSPEDVKRVVE------------F----------------G-LDHGVRVM-PEIDSPGHTGSWALAYPEIVACANMFWW-PA
    supercontig_88.31_CA SCM-PQRAH------------------------TSVPPVS----------------------------------------RIRN---LSACVDTP----SARPGSP-V------------
    Selmo_429308_SELMO   PEL-WKGSY------------------------SISQRYNLDDAKAIVK------------Y----------------A-RLRGIHVM-PEIDVPGHARSWGVGYPEL------------
    GRMZM2G121514_P01_ZE PKL-WNGAY------------------------SYSERYTVDDALDIVQ------------Y----------------A-EKRGVNVL-AEIDVPGHALSWGVGYPSL------------
    Selmo_441789_SELMO   PELSKKGSY------------------------GPEFTYSRQDVKRIVA------------F----------------A-RSRGVRVI-PEIDAPGHTASWGAAYPEMLTCLGKMWWDPN
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                610       620       630       640       650       660       670       680       690       700       710       720
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ----CPC-------MAVHSK----YGNGMAYTMLVL-----------DFSEVF-----KFRFVHLGGDEVNTS--CWTS--------------TPHI----NKWLKEHRM-NESGGYQYF
    Cucsa.165600.1_CUCSA ----WPS-------PSCKEP----LDVTKNFTFDLISGIL------TDLRKIF-----PFELFHLGGDEVNTD--CWET--------------VPHV----KQWLLDQNM-TTKDAYEYF
    Cre22.g762950.t1.1_C ----GGS-------AGSGGGTTGTIDPTKDSSYAAVGSVL------AAAAALL-----PERLLHLGGDEVDVG--CWAA--------------DPAV----RDWMARHGL-SGDDEGAYL
    Bradi2g37460.1_BRADI ----WPS-------ISCTEP----LDVSSNFTFEVLSGIL------SDMRKIF-----PFGLFHLGGDEVNTG--CWNI--------------TPHV----KQWLDDRNM-TTKDAYKFF
    Glyma02g10570.1_GLYM ----WPS-------PYCREP----LDVSKNFTFDVISGIL------TDMRKIF-----PFELFHLGGDEVNTD--CWSS--------------TSHV----KEWLQSHNM-TTRDAYQYF
    Selmo_422155_SELMO   ----WPS-------QNCRTP----LDVSKEFTFEVIDGIFFVHANLLDLRKAF-----PFELLHIGGDEIVGK--AQSLFLNGLIFSKSNSIETRYF----YDRLGKHNL-TATQAYKFF
    47890.m000013_RICCO  DWGILPD-----------------VINPNPRNIAFFETVL------DQVMRLF-----PSKLIHIGGDEAMKD--HWNA--------------NPAV----RAQMQALGLEDAEGLQAWF
    Glyma15g41990.1_GLYM E----GD-------IIAAEPGTGHLNPLNPKTYQVLKNVI------RDTTTLF-----PEPFYHSGADEIVPG--CWKT--------------DPTI----QKYLSNG-G-TLSQVLEKF
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ----------------------------------------------------------------------------------------------------------KHGL-DTSGAYQYF
    cassava4.1_033064m_M ----WPS-------KNCQQP----LDVSNEFTFKVIDGIL------SDFSKIF-----KFKFVHLGGDEVDTS--CWTS--------------TPRI----INWLKKHGM-NESEAYQYF
    supercontig_197.23_C E-SDWSE-------RLASEPGTGHLNPLNPKTYQVLKNVI------HDVSTLF-----PEPFYHGGADEIIPC--CWKA--------------DPTI----RSFLSNG-G-TLSQLLEKF
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ----WPS-------AECQEP----LDVSKEFTFKVIDGIL------SDFTKVF-----KFRFVHLGGDEVNTS--CWTN--------------TPHI----IEWYVSLQT----------
    GSVIVP00003707001_VI E-AEWAD-------RLASEPGTGHLNPLNPKTYQVFKNVI------HDVAALF-----PEPFYHSGADEIIPG--CWKA--------------DPTI----QTFLSNG-G-TLSQLLEIF
    Sb01g042640.1_SORBI  A----KP-------ALAAEPCTGQLNPLNPKTYRVAQDVL------RDLAALF-----PDPYLHAGADEVNTA--CWED--------------DPVV----RGFLADG-G-SHDRLLELF
    GSMUA_Achr5T28320_00 ----WPS-------ANCTEP----LDVSKNFTFEVISGIL------TDMRKIF-----PFGLFHLGGDEVNTD--CWNS--------------TRHV----KQWLQERNM-TTKEAYQYF
    At1g65590.1_ARATH    ----WPS-------KNCQEP----LDVSSDFTFKVIDGIL------SDFSKIF-----KFKFVHLGGDEVNTT--CWSA--------------TPRI----AQWLKKHRM-SEKEAYQYF
    Selmo_445016_SELMO   ----WPS-------GNCTQP----LDVS-------------------NFAKTF-----PFKFMHLGGDEVDTT--CWKK--------------TRHI----ARWLAHNNF-TAKQGYEYF
    Selmo_429325_SELMO   ------------------GP----LKTAKHL-----------------WTSVF-----PFELLHIGGDEVNTR--CWEF--------------TEPV----KDWLRKHNL-TPSQGYGFF
    Tc05_g015670_THECC   ----WPS-------KDCQQP----LDVSNEFTFKVIDGIL------SDFSKIF-----KFKFVHLGGDEVDTS--CWTT--------------TPHI----SKWLKKNGM-NESQAYQYF
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ----WPS-------KDCQQP----LDVSNEFTFKVIDGIL------SDFSKIF-----KFKFVHLGGDEVDTS--CWTS--------------TPHI----MNWLKKHNR-NESEAYQYF
    Selmo_422260_SELMO   ----WPS-------GNCTQP----LDVS-------------------NFAKTF-----PFKFMHLGGDEVDTT--CWKK--------------TRHI----ARWLAHNNF-TAKQGYEYF
    Bradi2g57420.1_BRADI ----WPS-------DSCKEA----LDVSNNFTFEVIDGIL------SDFSKVF-----KFKFVHLGGDEVNTS--CWTK--------------TPHI----KEWLNNNHM-NASDAYRYF
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT G-SDWPD-------RLAAEPGTGHLNPLNPKTYQVLKNVI------RDVTTLF-----PEQFYHSGADEVVPG--CWKT--------------DPTI----QKFLSNN-G-TLSQVLETF
    Os07g38790.1_ORYSA   A-SDWPS-------RLAAEPGAGQLNPLEPKTYQVMSNVI------NDVTSLF-----PDGFYHAGADEVTPG--CWNA--------------DPSI----QRYLARG-G-TLSRLLEKF
    Glyma10g43710.1_GLYM ----WPS-------PSCKEP----LDVSKKFTFDVLSGIL------TDMRKIF-----PFELFHLGGDEVNTD--CWTN--------------TSTV----NKWLRNHNM-TAKDAYQYF
    Glyma08g16970.1_GLYM G-RDWPH-------RFASQPGTGHLNPLNPKTYQVLKNVI------HDITTLF-----PEPFFHSGTDEIVPG--CWKT--------------DPAI----QKYLSNG-G-TLNQLLEKY
    Sb09g001670.1_SORBI  ----WPS-------PNCTEP----LDVSSNFTFEVISGIL------SDMRKIF-----PFGLFHLGGDEVYTG--CWNT--------------TPHV----RQWLNEHNM-TTKEAYKYF
    Os05g02510.1_ORYSA   ----WPS-------PKCREP----LDVTSNFTFEVISGIL------SDMRKIF-----PFGLFHLGGDEVYTG--CWNA--------------TPHV----KQWLHERNM-TTKDAYKYF
    Bradi3g44610.1_BRADI ----WPS-------ASCQQP----LDVSNDFTFKVIDGIL------SDFSKVF-----KFKFVHLGGDEVDTS--CWAT--------------TPHI----KSWLVQHGM-NESDAYRYF
    GSMUA_Achr11T11360_0 -------------------------------------------------------------------------------------------------------------M-NESQGYKYF
    GSVIVP00010037001_VI ----WPS-------KDCQQP----LDVSKEFTFKVIDGIL------SDFSKTF-----KYRFVHLGGDEVNTS--KCNN--------------FNNIYVVLNLQLSSSSS-TTSIIYEYI
    34575.m000024_RICCO  AQYLLNDLADKSVYKSPQLYNDHVINPGLESSYAFIDHVF------AQIVAMHREAGAPLRTIHVGGDELPRG--AWEK--------------SPAS----LALMRKQKLDTTADLWDYF
    Phypa_128384_PHYPA   ----WPT-------SKCIEP----LDVSSNFTFDVINGII------EDFRTVF-----PFKFAHLGGDEVDTG--CWER--------------TSHI----QNWLNVRNI-TAKDAYADF
    POPTR_0009s03010.1_P ---------------------------------------------------------------------------------------------------------------TLSQLLETF
    MDP0000564236_MALDO  G-VDWAD-------RLASEPGTGHLNPLNPKTYQVLKNVI------HDVSTLF-----PEPFFHAGADEIIPG--CWKA--------------DPTI----QSFLSKG-G-TLSELLDLF
    GRMZM5G860235_P01_ZE G--DWNH-------RLAAEPGAGQLNPLAAKTYEVITNVV------NDLTSLF-----PDGFYHAGADEVTPG--CWEA--------------DPTI----QADLERG-A-TLSQLLERY
    At1g05590.1_ARATH    G-KSWEE-------RLASEPGTGQLNPLSPKTYEVVKNVI------QDIVNQF-----PESFFHGGGDEVIPG--CWKT--------------DPAI----NSFLSSG-G-TLSQLLEKY
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ----------------------------------------------------------------------------------------------------------DRNM-SAEDAYQYF
    PDK_30s699271g002_PH ----WPS-------CNCTEP----LDVAKNFTFEVISGIL------TDMRKIF-----PFGLFHLGGDEVNTD--CWYS--------------TPHV----KQWLQEHNM-TTKDAYQYF
    PDK_30s998691g002_PH GLSNWAE-------RLASEPGTGQLNPLKPKTYQVVHRVI------QDVASLF-----PEPFYHAGGDEIIPG--CWKA--------------DPSI----QTFLSNG-G-TLSQLLQVF
    At3g55260.1_ARATH    ----WPS-------LSCREP----LDVTKNFTFDVISGIL------ADMRKIF-----PFELFHLGGDEVNTD--CWKN--------------TTHV----KEWLQGRNF-TTKDAYKYF
    MDP0000798095_MALDO  ----WPS-------PSCREP----LDVSKDLSLDVISGIL------TDMRKIF-----PFELFHLGGDEVNTT--CWNT--------------TQHV----KQWLEERNM-TTKDAYQYF
    Glyma18g52290.1_GLYM ----WPS-------PYCREP----LDVSKNFTFDVISGIL------ADMRKLF-----PFELFHLGGDEVNTD--CWSS--------------TSHV----KEWLQSHNM-TTRDAYQYF
    GSMUA_AchrUn_randomT --------------------------------------------------------------------------------------------------------LNKHGM-NESQGYKYF
    Cucsa.177460.1_CUCSA G-YKWED-------RLASEPGTGHLNPLNPTTYEVLKNVI------RDVISLF-----PESFYHAGADEIIPG--CWKT--------------DPLI----NSFLSNG-G-TLSQILEIF
    GSVIVP00009337001_VI ----WPS-------KDCQQP----LDVSKEFTFKVIDGIL------SDFSKTF-----KYRFVHLGGDEVNTS--KCNN--------------FNNIYVVLNLQLSSSSS-TTSIIYEYI
    POPTR_0008s07890.1_P ----WPS-------KDCQQP----LDVSNEFTFKVIDGIL------SDFSKIF-----KFKFVHLGGDEVDPS--CWTK--------------TPHI----TKWLKEHRM-NGSQAYQYF
    Glyma20g38400.1_GLYM ----WPS-------PSCKEP----LDVSKKFTFDVLSGIL------TDMRKIF-----PFELFHLGGDEVNTD--CWSN--------------TSTV----SKWLRNHNM-TAKDAYQYF
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ----WPS-------VSCKEP----LDVTKNFTFDVISGIL------SDMRKIF-----PFELFHLGGDEVNTD--CWLF--------------TSHI----KQWIRDRNF-TTKDAYEYF
    Tc05_g024510_THECC   G-SLWAD-------RLASEPGTGHLNPLNPKTYQVLKNVI------RDVATLF-----PETFYHGGADEVIPG--CWKA--------------DPTI----QSFLSNG-G-TLSQLLETF
    cassava4.1_007813m_M G-SEWAD-------RLASEPGTGHLNPLNPKTYEVLKNVI------ADTVTLF-----PEPFYHAGADEIIPG--CWKA--------------DPTI----KSFLSDN-G-TLSQLLENF
    Bradi1g23740.1_BRADI A-NDWGS-------RLAAEPGSGQLNPLKAKTFEVMANVI------NDVTSLF-----PDGFYHAGADEVTPG--CWQA--------------DPSI----QADIANG-G-TLSQLLEKY
    Cucsa.178740.1_CUCSA ----WPS-------KDCQQP----LDVSNEFTFQVIDGIL------SDFSKIF-----KYRFVHLGGDEVNTT--CWTV--------------TPHI----KNWLRKKGM-KESDAYKYF
    28180.m000376_RICCO  ----WPS-------SSCREP----LDVSKNFTFDVISGIL------TDMRKIF-----PFELFHLGGDEVNTAQNCLDF--------------HGFL----SDVLVLSLI-PMRLSYHTI
    Selmo_422160_SELMO   ----WPS-------ENCKTP----LDISKNFTFEVIDGIF------SDLSKVF-----PFELLHIGGDEVNTR--CWEI--------------TEPV----NDWLRKHNL-TPSQGYEFF
    Os05g34320.1_ORYSA   ----WPS-------ATCKEP----LDVSSESTFQVINGIL------SDFSKVF-----KFKFVHLGGDEVNTS--CWTS--------------TPRV----KAWLAQHGM-KESDAYRYF
    GSVIVP00009334001_VI -----------------QSP---------------------------------------------------------TG--------------KLRV----AGTLRQHGL-DTSGAYQYF
    GSMUA_Achr2T07820_00 D----GP-------ALAAEPGTGQLNPLEPETYEVVRDVL------RGVASLF-----PDPFLHAGADEVNPA--CWEQ--------------DPAI----RRFLAGG-G-THDQLLGMF
    Sb02g037280.1_SORBI  G--DWNN-------RLAAEPGAGQLNPLAPKTYEVITNVV------NDLTSLF-----PDGFYHAGADEVTPG--CWQA--------------DATI----QADLERG-G-TLSQLLERY
    Selmo_422139_SELMO   ----WPS-------ESCTTP----LDISKEFTFE-----------------VF-----PFELLHIGGDEVDTS--CWQI--------------ARPT----NNWLVEHNF-TAAEAYEFF
    POPTR_0001s23930.1_P E-SEWAD-------RLASEPGTGQLNPLNPNTYQVLKNVI------GDAVALF-----PEPFFHAGGDEIIPG--CWKA--------------DPAI----QSFLSKN-G-TLSQLLEKF
    GRMZM2G034598_P01_ZE ----WPS-------PICTEP----LDVSSDFTFEVIFGIL------SDMRKIF-----PFGLFHLGGDEVYTG--CWNT--------------TPHV----RQWMDERKM-TTKDAYKYF
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  G-SEWPD-------RLASEPGTGQLNPLNPKTYEVLKNII------ADAVTMF-----PEPFYHAGGDEIIPG--CWKA--------------DPAI----QSFLSDN-G-TLSQLLETF
    cassava4.1_004406m_M G-SEWAD-------RLASEPGTGHLNPLNPKTYEVVKNVI------SDIVTLF-----PEPFYHAGADEIIPG--CWKA--------------DPAI----QSFLSDN-G-TLSQLLEIF
    GRMZM2G134251_P01_ZE A----KP-------ALAAEPCTGQLNPLNPKTYRVAEDVL------RDLAALF-----PDPYLHAGADEVNTA--CWED--------------DPVV----RGFLADG-G-SHDRLLELF
    POPTR_0010s21790.1_P ----WPS-------PSCREP----LDVSKNFTFDVISGIM------TDLRKIF-----PFGLFHLGGDEVNTD--CWNS--------------TSHV----KQWLLDHNM-TTKEAYQYF
    Bradi2g25310.1_BRADI ----WPS-------ASCQQP----LDVSNNFTFKVIDGIL------SDFSKVF-----KFKFVHLGGDEVNTS--CWTT--------------TPRI----KSWLVQHGM-NESDAYRYF
    Sb09g020420.1_SORBI  ----WPS-------ATCKEP----LDVSNEFTFQVINGIL------SDFSKIF-----KFKFVHLGGDEVNTS--CWST--------------TPHI----KSWLMQHGM-NESDAYRYF
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P E-SKWAD-------RLASEPGTGQLNPLNPNTYQVLKNVI------GDAVALF-----PEPFFHAGGDEIIPG--CWKA--------------DPAI----QSFLSKN-G-TLSQLLEKF
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI ----WPS-------PSCREP----LDVSKEFTFDMVSGIL------TDMRKIF-----PFELFHLGGDEVNTD--CWNS--------------TPHV----QQWLQDHNM-TPKEAYQYF
    POPTR_0008s04960.1_P --------------------------------------VLLVVFYYTKKDLIK-----DGRVLEIGWAGCLIT--IWVI--------------LDDN----RSWLPCLQM-GIGESPKCQ
    Os01g66700.1_ORYSA   ----WPS-------DSCKEP----LDVSNNFTFGVIDGIL------SDFSKVF-----KFKFVHLGGDEVNTS--CWTA--------------TPHI----KKWLDDNQM-NVSDAYRYF
    Tc00_g000370_THECC   ----WPT-------SSCREP----LDVSKNFTFDLISGIL------SDIRKIF-----PFELFHLGGDEVNTD--CWTS--------------TPHI----KQWLNNRNM-TAKDAYQYF
    Bradi1g69660.1_BRADI A----MP-------ALAAEPCTGQLNPLNPKAYRVAQDVL------RDLSALF-----PDPFLHGGADEVNTA--CWED--------------DPVV----RRFLQEG-G-THDHLLELF
    GSMUA_Achr11T11280_0 ---------------------------------------------------------------------------------------------SQKP----AHPLNKHGM-NESQGYKYF
    Os03g11980.1_ORYSA   A----EP-------ALAAEPGTGQLNPLNPKTYRVAQDVL------RDMVALF-----PDPYLHGGADEVNTA--CWED--------------DPVV----RRFLAEG-G-THDHLLELF
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   ----WPS-------QNCKTP----LDISKNFTFEVIDGIF------SDLSKVF-----PFELLHIGGDEVNTR--CWEI--------------TEPV----NDWLRKHNL-TPSQGYEFF
    Glyma08g17200.1_GLYM E-G---D-------ILAAEPGTGHLNPLNPKTYQVLKNVI------RDMTTLF-----PEPFYHSGADEIVPG--CWKT--------------DPTI----QKYLSNG-G-TLSQVLEKF
    supercontig_88.31_CA ----WAR-------SNCVPL----AR----------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   ----WPS-------ENCKTP----LDISKNFTFEVIDGIF------SDLSKVF-----PFELLHIGGDEVNTR--CWEI--------------TQPV----NDWLRKHNL-TPSLGYEFF
    GRMZM2G121514_P01_ZE ----WPS-------ATCKEP----LDVSNEFTFQLINGIL------SDFSKIF-----KFKFVHLGGDEVNTS--CWST--------------TPHI----KSWLMQHSM-NESDAYRYF
    Selmo_441789_SELMO   T-QDWSK-------RMASEPGAGQLNPLHPKTYQVLKHII------EEVTALF-----PDSFYHAGADEIAPG--CWNA--------------SEEL----SRLVSSGNA-TMGSLLELF
    Os05g32410.1_ORYSA   ------------------------------------------------MVALF-----PDPYLHGGTDEVNTA--CWEN--------------DPVV----RRFLAEG-G-THNHLLEVF
    28180.m000377_RICCO  ----------------------------------------------------------------------------------------------RSL----EELLRDHNL-TTKDAYKYF

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                730       740       750       760       770       780       790       800       810       820       830       840
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P VLRAQKIALS-HGYEVINW-------------------------EETFNNFGD-KLSP------KTVVH---------------------------------------------------
    Cucsa.165600.1_CUCSA VLRAQEIAIS-KNWTPVNW-------------------------EETFINFEK-GLNP------RTIVH---------------------------------------------------
    Cre22.g762950.t1.1_C AL------------------------------------------QEAFDVAGGAQLPR------ETIVQADVAGWALEAEVEMEAAAAAGVEAALAAAVAADPGLDEDEREELAEMLEAE
    Bradi2g37460.1_BRADI VLKAQEIAIN-LNWIPVNW-------------------------EETFNSFGE-NLNP------LTVVH---------------------------------------------------
    Glyma02g10570.1_GLYM VLKAQEMAVS-KNWSPVNW-------------------------EETFNTFPS-KLHP------NTIVH---------------------------------------------------
    Selmo_422155_SELMO   VLEVQKLAMK-HGYVPVSW-------------------------QEAFQNFGS-SLPK------NTIIQ---------------------------------------------------
    47890.m000013_RICCO  MARIAAYVAA-HGRQAIGW-------------------------------------DKSAPLPAEAVVM---------------------------------------------------
    Glyma15g41990.1_GLYM INNTLPFIVS-LNRTVVYW-------------------------EDVLLSETV-HVPSTILPKEHVVLQ---------------------------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI VLRAQKIALS-HGYEIINW-------------------------EETFNDFGS-KLSR------KTVVH---------------------------------------------------
    cassava4.1_033064m_M VLRAQKIALS-HGYEIVNW-------------------------EETFNNFGG-KLSR------KTVVH---------------------------------------------------
    supercontig_197.23_C VNSTLPYIIS-LNKTAVYW-------------------------EDVLLDENV-KVDSSFLPRQHTILQ---------------------------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI INSTFPYIVS-LNRTVVYW-------------------------EDVLLDANV-KVDPSMLPPENTILQ---------------------------------------------------
    Sb01g042640.1_SORBI  VNATRPFLVHELNRTSVYW-------------------------EDVLLGPKV-SVGQTVLPRDTTVLQ---------------------------------------------------
    GSMUA_Achr5T28320_00 VLRAQKIATS-LGWIPVNW-------------------------EETFNTFKE-NLDL------QTVVH---------------------------------------------------
    At1g65590.1_ARATH    VLRAQKIALS-HGYEIINW-------------------------EETFINFGS-KLNR------KTVVH---------------------------------------------------
    Selmo_445016_SELMO   VLRAQKIALK-YGLTPVNW-------------------------EETFNNFGS-KLNN------ETIIH---------------------------------------------------
    Selmo_429325_SELMO   VLQVQRLALK-HGYVPVNW-------------------------QEPFEKFGP-SLSR------KTIVH---------------------------------------------------
    Tc05_g015670_THECC   VLRAQNLALS-HGYEIVNW-------------------------EETFNNFGN-KLSR------KTVVH---------------------------------------------------
    cassava4.1_021615m_M --------------------------------------------EETFNAFAS-KLHP------KTVVH---------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  VLRAQQIALS-HGYEIVNW-------------------------EETFNSFGN-KLSR------KTVVH---------------------------------------------------
    Selmo_422260_SELMO   VLRAQKIALK-YGLTPVNW-----------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI VLRSQKIAIA-HGYDVINW-------------------------EETFNDFGE-KLDR------KTIVH---------------------------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT INNTLPFILS-LNRTVVYW-------------------------EDVLLDDTV-HVPSTILPKEHVILQ---------------------------------------------------
    Os07g38790.1_ORYSA   VGAAHPLIVS-RNRTAVYW-------------------------EDVLLDQAV-NVTASAIPPETTILQ---------------------------------------------------
    Glyma10g43710.1_GLYM VLKAQNIALT-KNWSPVNW-------------------------EETFNTFPT-KLHP------RTVVH---------------------------------------------------
    Glyma08g16970.1_GLYM INNTLPFIVS-LNHTVVFW-------------------------EDVLLDNIV-HVPSAILPKEHVILQ---------------------------------------------------
    Sb09g001670.1_SORBI  VLKAQQLAIK-LNWIPVNW-------------------------EETFNSFAE-NLNP------LTVVH---------------------------------------------------
    Os05g02510.1_ORYSA   VLKAQEIAIN-LNWIPVNW-------------------------EETFNSFKE-NLNP------LTVVH---------------------------------------------------
    Bradi3g44610.1_BRADI VVRAQKIAIS-HGYDIINW-------------------------EETFNNFGD-KLDR------KTVVH---------------------------------------------------
    GSMUA_Achr11T11360_0 VLRAQKIALS-HGYEVINW-------------------------EETFNNFGS-QLSP------KTVVH---------------------------------------------------
    GSVIVP00010037001_VI LV----------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  YDRVDGMLKK-HGLYASGW-------------------------EELAGRVTT-VRGQSTLIPNPLFTRRGFRAY---------------------------------------------
    Phypa_128384_PHYPA   VVRAQDIAIK-HGYVPVNW-------------------------EETFHTFSS-RLKK------ETVVH---------------------------------------------------
    POPTR_0009s03010.1_P VSSTFPYIVS-LNRTVVCW-------------------------EDFLLDDNT-LHFFHLIIYHPTI-----------------------------------------------------
    MDP0000564236_MALDO  VNSTFPYIVS-LNRTVVYW-------------------------EDVLLDDNV-KVQATILPPEHTILQ---------------------------------------------------
    GRMZM5G860235_P01_ZE VSAVHPLVVS-RNRTAVYW-------------------------EDVLLDAAV-NVSASAIPPATTVLQ---------------------------------------------------
    At1g05590.1_ARATH    INSTLPYIVS-QNRTVVYW-------------------------EDVLLDAQI-KADPSVLPKEHTILQ---------------------------------------------------
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C VLRAQEIAIS-KNWTPVNWYDLPIFIAVFHPKQKHATDRVFHPREETFNVFAT-KLNP------KTVVH---------------------------------------------------
    PDK_30s699271g002_PH VLRAQEIAID-LGWIPVNW-------------------------EETFNAFKE-KLDP------QTVIH---------------------------------------------------
    PDK_30s998691g002_PH LNSTHPYIAS-LNRTTVYW-------------------------EDVLLDPLV-KVEPSTIPPETTVLQ---------------------------------------------------
    At3g55260.1_ARATH    VLRAQQIAIS-KNWTPVNW-------------------------EETFSSFGK-DLDP------RTVIQ---------------------------------------------------
    MDP0000798095_MALDO  VIKAQEIAIS-KKWTPVNW-------------------------EETFNTFPS-KLNP------KTVVH---------------------------------------------------
    Glyma18g52290.1_GLYM VLKAQEMAVS-KNWSPVNW-------------------------EETFNTFPS-KLHP------KTIVH---------------------------------------------------
    GSMUA_AchrUn_randomT VLRAQKIALS-HGYEVINW-------------------------EETFNNFGS-QLSP------KTVVH---------------------------------------------------
    Cucsa.177460.1_CUCSA VNTTFPYIRS-HNRTVVYW-------------------------EDVLLDDIV-KVRPEVLPQEHTILQ---------------------------------------------------
    GSVIVP00009337001_VI LV----------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P VLRAQKIALS-HGFEIVNW-------------------------EETFNDFRN-KLSR------KTVVH---------------------------------------------------
    Glyma20g38400.1_GLYM VLKAQNIALT-KNWSPVNW-------------------------EETFNTFPT-KLHP------RTVVH---------------------------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M VLKAQEIAIS-KGWTPVN------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   VNSTLPYIIS-LNRTVVYW-------------------------EDVLLDDNV-KVDSSFLPREYTILQ---------------------------------------------------
    cassava4.1_007813m_M VKSTLPYIVS-LNRTVVYW-------------------------EDILLDDNV-KVDASVLLPEHTILQ---------------------------------------------------
    Bradi1g23740.1_BRADI VRAVHPHVVS-KNRTAVFW-------------------------EDVLLDATV-NVSASLIPPATTILQ---------------------------------------------------
    Cucsa.178740.1_CUCSA VLRAQKIALS-HGYELVNW-------------------------EETFNDFGS-ELSR------KTVVH---------------------------------------------------
    28180.m000376_RICCO  YL----------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   VLQVQKLALK-HGYVPVNW-------------------------QEPFEKFGP-SLSR------KTIVH---------------------------------------------------
    Os05g34320.1_ORYSA   VLRAQKIAKS-HGYEVINW-------------------------EETFNNFGD-KLDR------RTVVH---------------------------------------------------
    GSVIVP00009334001_VI VLRAQKIALS-HGYEIINW-------------------------EETFNDFGS-KLSR------KTVVH---------------------------------------------------
    GSMUA_Achr2T07820_00 VNATRPFIVSALNRTVVYW-------------------------EDVLLGSTVKVVSPGLLPPETTVLQ---------------------------------------------------
    Sb02g037280.1_SORBI  VSAVHPLVVS-KNRTAVYW-------------------------EDVLLDAAV-NVSASLIPPATTILQ---------------------------------------------------
    Selmo_422139_SELMO   VLQVQKLAMK-HGYVPVNW-------------------------QEPFEKFGQ-SLSR------KTIVH---------------------------------------------------
    POPTR_0001s23930.1_P VNSTFPYIVS-LNRTVVYW-------------------------EDILLDANV-KVGPSFLPPEHTILQ---------------------------------------------------
    GRMZM2G034598_P01_ZE VLKAQELAIK-LNWTPVNW-------------------------EETFNSFEE-NLNP------LTVVH---------------------------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  VRSTFPYIVS-LNRTVVYW-------------------------EDILLDDNV-KVDAAILPPEHTILQ---------------------------------------------------
    cassava4.1_004406m_M VNSTFPYIVS-LNRTVVYW-------------------------EDILLDDNV-KVDASFLPPEQTILQ---------------------------------------------------
    GRMZM2G134251_P01_ZE VNATRPFLVHELNRTSVYW-------------------------EDVLLGPKV-SVGQTVLPHDTTVLQ---------------------------------------------------
    POPTR_0010s21790.1_P VLRAQEIAIS-KGWTPVNW-------------------------EETFNTFAS-NLNP------KTIVH---------------------------------------------------
    Bradi2g25310.1_BRADI VLRAQKIAIS-HGYDIINW-------------------------EETFNNFGD-KLDR------KTVVH---------------------------------------------------
    Sb09g020420.1_SORBI  VLRAQKIAIS-HGYDIINW-------------------------EETFNNFGD-KLDR------KTVVH---------------------------------------------------
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P VNSTFPYIVS-LNRTVVYW-------------------------EDILLDANV-KVDPSFLPPEHTILQ---------------------------------------------------
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI VLRAQEIAIS-KNWAPVNW-------------------------EETFNTFAT-NLNP------RTVIH---------------------------------------------------
    POPTR_0008s04960.1_P VFVGEK------------R-------------------------EETFNTFAS-NLNP------RTIVH---------------------------------------------------
    Os01g66700.1_ORYSA   VLRSQKLAIS-HGYDVINW-------------------------EETFNNFGD-KLDR------RTVVH---------------------------------------------------
    Tc00_g000370_THECC   VLKAQEMAIS-KGWTPVNW-------------------------EETFNAFAS-NLNP------RTVVH---------------------------------------------------
    Bradi1g69660.1_BRADI VNATRPFMVHELNRTVVYW-------------------------EDVLLGPKV-MVGPTVLPRETTVLQ---------------------------------------------------
    GSMUA_Achr11T11280_0 VLRAQKIALS-HGYEVINW-------------------------EETFNNFRS-QLSP------KTVVH---------------------------------------------------
    Os03g11980.1_ORYSA   INATRPFVAQELNRTVVYW-------------------------EDVLLGPKV-TVGPTILPRETTILQ---------------------------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   VLQVQKLALK-HGYLPVNW-------------------------QEPFEKFGP-SLSR------KTIVH---------------------------------------------------
    Glyma08g17200.1_GLYM INNTLPFIVS-LNRTVVYW-------------------------EDVLLSETV-HVPSTILPKEHVVLQ---------------------------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   VLEVQKLALK-HGYLPVNW-------------------------QEPFEKFGP-SLSR------KTIVH---------------------------------------------------
    GRMZM2G121514_P01_ZE VLRAQKIAIS-HGYDIINW-------------------------EETFNNFGD-KLDR------KTVVH---------------------------------------------------
    Selmo_441789_SELMO   VNRTYPMIAS-RNKTVVYW-------------------------EDILLDAAV-NVSADLLPRGSTVIQ---------------------------------------------------
    Os05g32410.1_ORYSA   INTTRPFVAQELNQ--LPW-------------------------HSVPQP----LGQPVCRPPSHRI-----------------------------------------------------
    28180.m000377_RICCO  VLRAQEIAIS-KGWTPVNW-------------------------EETFNTFAS-SLHP------RTIVH---------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                850       860       870       880       890       900       910       920       930       940       950       960
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P --------------NW--------------------LG----------------------------------------------------------------------------------
    Cucsa.165600.1_CUCSA --------------NW--------------------LR----------------------------------------------------------------------------------
    Cre22.g762950.t1.1_C AFAQEWVQQRRLLFDWSNLWGGGGGGGGGNNNAAERTGGHGGGSGGAGGGGGMMRGGGLRAGGGGGGGAAGGGELGEGGMPVRRKKKMKKKKKMKKRKIVPAGGGGGGDGYGGGGADDDD
    Bradi2g37460.1_BRADI --------------NW--------------------LG----------------------------------------------------------------------------------
    Glyma02g10570.1_GLYM --------------NW--------------------LG----------------------------------------------------------------------------------
    Selmo_422155_SELMO   --------------NW--------------------LG----------------------------------------------------------------------------------
    47890.m000013_RICCO  --------------SWAG------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM --------------TWN-------------------NG----------------------------------------------------------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI --------------NW--------------------LG----------------------------------------------------------------------------------
    cassava4.1_033064m_M --------------NW--------------------LG----------------------------------------------------------------------------------
    supercontig_197.23_C --------------TWN-------------------NG----------------------------------------------------------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI --------------TWN-------------------NG----------------------------------------------------------------------------------
    Sb01g042640.1_SORBI  --------------TWN-------------------NG----------------------------------------------------------------------------------
    GSMUA_Achr5T28320_00 --------------NW--------------------LG----------------------------------------------------------------------------------
    At1g65590.1_ARATH    --------------NW--------------------LN----------------------------------------------------------------------------------
    Selmo_445016_SELMO   --------------NWSKLYPYVFLGYSHSWNLLFRIG----------------------------------------------------------------------------------
    Selmo_429325_SELMO   --------------NW--------------------WG----------------------------------------------------------------------------------
    Tc05_g015670_THECC   --------------NW--------------------LG----------------------------------------------------------------------------------
    cassava4.1_021615m_M --------------NW--------------------LG----------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  --------------NW--------------------LG----------------------------------------------------------------------------------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI --------------NW--------------------LG----------------------------------------------------------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT --------------TWN-------------------NG----------------------------------------------------------------------------------
    Os07g38790.1_ORYSA   --------------TWN-------------------NG----------------------------------------------------------------------------------
    Glyma10g43710.1_GLYM --------------NW--------------------LG----------------------------------------------------------------------------------
    Glyma08g16970.1_GLYM --------------TWH-------------------NG----------------------------------------------------------------------------------
    Sb09g001670.1_SORBI  --------------NW--------------------LG----------------------------------------------------------------------------------
    Os05g02510.1_ORYSA   --------------NW--------------------LG----------------------------------------------------------------------------------
    Bradi3g44610.1_BRADI --------------NW--------------------LG----------------------------------------------------------------------------------
    GSMUA_Achr11T11360_0 --------------NW--------------------LG----------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  --------------VWNNTEGA--------------------------------------------------------------------------------------------------
    Phypa_128384_PHYPA   --------------NW--------------------FQ----------------------------------------------------------------------------------
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  --------------TWN-------------------NG----------------------------------------------------------------------------------
    GRMZM5G860235_P01_ZE --------------SWN-------------------NG----------------------------------------------------------------------------------
    At1g05590.1_ARATH    --------------TWN-------------------NG----------------------------------------------------------------------------------
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C --------------NW--------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH --------------NW--------------------LG----------------------------------------------------------------------------------
    PDK_30s998691g002_PH --------------TWN-------------------NG----------------------------------------------------------------------------------
    At3g55260.1_ARATH    --------------NW--------------------LV----------------------------------------------------------------------------------
    MDP0000798095_MALDO  --------------NW--------------------LG----------------------------------------------------------------------------------
    Glyma18g52290.1_GLYM --------------NW--------------------LG----------------------------------------------------------------------------------
    GSMUA_AchrUn_randomT --------------NW--------------------LG----------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA --------------TWN-------------------NG----------------------------------------------------------------------------------
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P --------------NW--------------------LG----------------------------------------------------------------------------------
    Glyma20g38400.1_GLYM --------------NW--------------------LG----------------------------------------------------------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   --------------TWN-------------------NG----------------------------------------------------------------------------------
    cassava4.1_007813m_M --------------TWN-------------------NG----------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI --------------TWN-------------------NG----------------------------------------------------------------------------------
    Cucsa.178740.1_CUCSA --------------NW--------------------LG----------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   --------------NW--------------------WG----------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   --------------NW--------------------LG----------------------------------------------------------------------------------
    GSVIVP00009334001_VI --------------NW--------------------LG----------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 --------------TWN-------------------NG----------------------------------------------------------------------------------
    Sb02g037280.1_SORBI  --------------SWN-------------------NG----------------------------------------------------------------------------------
    Selmo_422139_SELMO   --------------NW--------------------WG----------------------------------------------------------------------------------
    POPTR_0001s23930.1_P --------------TWN-------------------NG----------------------------------------------------------------------------------
    GRMZM2G034598_P01_ZE --------------NW--------------------LG----------------------------------------------------------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  --------------TWN-------------------NG----------------------------------------------------------------------------------
    cassava4.1_004406m_M --------------TWN-------------------NG----------------------------------------------------------------------------------
    GRMZM2G134251_P01_ZE --------------TWN-------------------NG----------------------------------------------------------------------------------
    POPTR_0010s21790.1_P --------------NW--------------------LG----------------------------------------------------------------------------------
    Bradi2g25310.1_BRADI --------------NW--------------------LG----------------------------------------------------------------------------------
    Sb09g020420.1_SORBI  --------------NW--------------------LG----------------------------------------------------------------------------------
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P --------------TWN-------------------NG----------------------------------------------------------------------------------
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI --------------NW--------------------LG----------------------------------------------------------------------------------
    POPTR_0008s04960.1_P --------------KW--------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   --------------NW--------------------LG----------------------------------------------------------------------------------
    Tc00_g000370_THECC   --------------NW--------------------LG----------------------------------------------------------------------------------
    Bradi1g69660.1_BRADI --------------TWN-------------------NG----------------------------------------------------------------------------------
    GSMUA_Achr11T11280_0 --------------NW--------------------Y-----------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   --------------TWN-------------------DG----------------------------------------------------------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   --------------NW--------------------WG----------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM --------------TWN-------------------NG----------------------------------------------------------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   --------------NW--------------------WG----------------------------------------------------------------------------------
    GRMZM2G121514_P01_ZE --------------NW--------------------LG----------------------------------------------------------------------------------
    Selmo_441789_SELMO   --------------TWN-------------------NG----------------------------------------------------------------------------------
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  --------------NW--------------------LG----------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ------------------------------------------------------------------------------------------------------------------------
    Cucsa.165600.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Cre22.g762950.t1.1_C DTGAWRRRTLLGQRLRFAHPEDANEAERPSLSLARPYLHPGPHRAITVPRHRQEQEEQEGKKQQQQQVEVEVEVAAVMPVEQQQMEVEKEQQQQQQQQKAAAVLRHRGIGSGSGSSSSAA
    Bradi2g37460.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Glyma02g10570.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Selmo_422155_SELMO   ------------------------------------------------------------------------------------------------------------------------
    47890.m000013_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C ------------------------------------------------------------------------------------------------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI ------------------------------------------------------------------------------------------------------------------------
    Sb01g042640.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr5T28320_00 ------------------------------------------------------------------------------------------------------------------------
    At1g65590.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Selmo_445016_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Selmo_429325_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Tc05_g015670_THECC   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Os07g38790.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Glyma10g43710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Glyma08g16970.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Sb09g001670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os05g02510.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Bradi3g44610.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Phypa_128384_PHYPA   ------------------------------------------------------------------------------------------------------------------------
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G860235_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    At1g05590.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ------------------------------------------------------------------------------------------------------------------------
    PDK_30s998691g002_PH ------------------------------------------------------------------------------------------------------------------------
    At3g55260.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000798095_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma18g52290.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P ------------------------------------------------------------------------------------------------------------------------
    Glyma20g38400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007813m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.178740.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 ------------------------------------------------------------------------------------------------------------------------
    Sb02g037280.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422139_SELMO   ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23930.1_P ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G034598_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_004406m_M ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G134251_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    POPTR_0010s21790.1_P ------------------------------------------------------------------------------------------------------------------------
    Bradi2g25310.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Sb09g020420.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Tc00_g000370_THECC   ------------------------------------------------------------------------------------------------------------------------
    Bradi1g69660.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121514_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Selmo_441789_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ------------------------------------------------------------------------------------------------------------------------
    Cucsa.165600.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Cre22.g762950.t1.1_C SSSSSDTASRFYTGATTRQHHAQLRTQQTHTQTDPQQQQQVQQQGQQQQQQGEKQQEGDQQEADAAAHAAAGAAADLQAATTGPATTAAAGDTAAVAAAAAAAQDTHAAAGTADHDKAHG
    Bradi2g37460.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Glyma02g10570.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Selmo_422155_SELMO   ------------------------------------------------------------------------------------------------------------------------
    47890.m000013_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Glyma15g41990.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_197.23_C ------------------------------------------------------------------------------------------------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI ------------------------------------------------------------------------------------------------------------------------
    Sb01g042640.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr5T28320_00 ------------------------------------------------------------------------------------------------------------------------
    At1g65590.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    Selmo_445016_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Selmo_429325_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Tc05_g015670_THECC   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_021615m_M ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Os07g38790.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Glyma10g43710.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Glyma08g16970.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    Sb09g001670.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Os05g02510.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Bradi3g44610.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Phypa_128384_PHYPA   ------------------------------------------------------------------------------------------------------------------------
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM5G860235_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    At1g05590.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ------------------------------------------------------------------------------------------------------------------------
    PDK_30s998691g002_PH ------------------------------------------------------------------------------------------------------------------------
    At3g55260.1_ARATH    ------------------------------------------------------------------------------------------------------------------------
    MDP0000798095_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma18g52290.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P ------------------------------------------------------------------------------------------------------------------------
    Glyma20g38400.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007813m_M ------------------------------------------------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.178740.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00009334001_VI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 ------------------------------------------------------------------------------------------------------------------------
    Sb02g037280.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422139_SELMO   ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23930.1_P ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G034598_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_004406m_M ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G134251_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    POPTR_0010s21790.1_P ------------------------------------------------------------------------------------------------------------------------
    Bradi2g25310.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    Sb09g020420.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    Tc00_g000370_THECC   ------------------------------------------------------------------------------------------------------------------------
    Bradi1g69660.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G121514_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Selmo_441789_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g32410.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ------------------------------------------GGVAPTVVAAGLRCIVSNQDSWYLDHLD--------------------------------------------ATWQKF
    Cucsa.165600.1_CUCSA ------------------------------------------GGICPKAVADGFRCIFSDQGVWYLDHLD--------------------------------------------VPWDRA
    Cre22.g762950.t1.1_C DGGGNSNTGYDSGGDVDTRRALAALRGAVTAARAARLGERGQGEELAAVTAAGFRAIVSSG--WYLDWVS------------------------------------------WGQDWRRY
    Bradi2g37460.1_BRADI ------------------------------------------PGVCPKVVAKGLRCIMSNQGAWYLDHLD--------------------------------------------VPWEDV
    Glyma02g10570.1_GLYM ------------------------------------------PGVCPKVVAKGFRCIYSNQGVWYLDHLD--------------------------------------------VPWDEV
    Selmo_422155_SELMO   ------------------------------------------SAIAPSVVKSGLKCIISEQASWYLDHFE--------------------------------------------VTWEQF
    47890.m000013_RICCO  ------------------------------------------SEAAVAAIKAGHETILAPAPVFYINNRQ-------------------------------SQSNDEPPGRRDIISWQRV
    Glyma15g41990.1_GLYM ------------------------------------------HNNTKRIVSSGYRAIVSSSDFYYLDCGHGGFVGNNSIYDQQ-N---------------GGDKDSGGSWCGPFKTWQTI
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ------------------------------------------GGVAEKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------APWEGF
    cassava4.1_033064m_M ------------------------------------------DGVAEKVVAAGLRCIVSNQDNWYLDHLD--------------------------------------------TTWQQF
    supercontig_197.23_C ------------------------------------------PNNTKRIVSAGYRAIVSSSDYYYLDCGHGDFLGNNSQYDLPPR---------------SNNSKDGGSWCGPFKTWQTI
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI ------------------------------------------PNNTKKVVASGYRAIVSSSDFYYLDCGHGDFLGNDK---------------------------NGGSWCGPFKTWQTI
    Sb01g042640.1_SORBI  ------------------------------------------AANTKRVVSAGYRVIVSSSSYYYLDCGHGGWVGNDSRYDVQEKEH-------DGMPLFNDPGGTGGSWCAPFKTWQRI
    GSMUA_Achr5T28320_00 ------------------------------------------PGVCPQAVAKGFRCIMSNQGVWYLDHLD--------------------------------------------VPWENF
    At1g65590.1_ARATH    ------------------------------------------TGLVENVTASGLRCIVSNQEFWYLDHID--------------------------------------------APWQGF
    Selmo_445016_SELMO   ------------------------------------------PGLAPLVVGAGFKCIVSDQDVWYLDHLD--------------------------------------------VPWQSF
    Selmo_429325_SELMO   ------------------------------------------TQIPPNTVSSGLKSIVSEQFSWYLHHID--------------------------------------------IPWEEF
    Tc05_g015670_THECC   ------------------------------------------GGVAQQVVASGLRCIVSNQDKWYLDHLD--------------------------------------------TTWQEF
    cassava4.1_021615m_M ------------------------------------------GGVCAKAVAKGFRCIFSNQEFWYLDHLD--------------------------------------------VPWDEV
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ------------------------------------------GGVAQQVVASGLRCIVSNQDQWYLDHLD--------------------------------------------TTWQEF
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI ------------------------------------------GKVAPKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------ATWEGF
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ------------------------------------------HNNTKRIVSSGYRAIVSSSDFYYLDCGHGDFTGNNSIYDNQ-T---------------GSDKNDGGSWCGPFKTWQNI
    Os07g38790.1_ORYSA   ------------------------------------------GNNTRLIVRAGYRAIVSSASFYYLDCGHGDFAGNDSAYDDP-R---------------SDYGTSGGSWCGPYKTWQRV
    Glyma10g43710.1_GLYM ------------------------------------------PGVCPKAVAKGFRCIFSNQGVWYLDHLD--------------------------------------------VPWDDV
    Glyma08g16970.1_GLYM ------------------------------------------HNHTKKIVSAGYRTIVSSAEFYYLDCGHGSYVGNNSAYDNQ-D---------------G-DMGNGGSWCAPFKTWQTI
    Sb09g001670.1_SORBI  ------------------------------------------PGVCPKVVAKGFKCIMSNQGVWYLDHLD--------------------------------------------VPWEDV
    Os05g02510.1_ORYSA   ------------------------------------------PGVCPKVVEKGFRCIMSNQGVWYLDHLD--------------------------------------------VPWQDF
    Bradi3g44610.1_BRADI ------------------------------------------RGVAEKAVSAGLRCIVSNADKWYLDHLD--------------------------------------------ATWEGF
    GSMUA_Achr11T11360_0 ------------------------------------------GGIAQKVVAAGLRYAL--------------------------------------------------------------
    GSVIVP00010037001_VI -----------------------------------------------------------------------------------------------------------------------F
    34575.m000024_RICCO  ------------------------------------------EDLAYRLANAGYDVVLAPVTRMYMDMSH------------------------------NPNPEEPGVNWGAYVELDTV
    Phypa_128384_PHYPA   ------------------------------------------SGTCAQAVKKGFSCILSDQSSWYLDHLD--------------------------------------------ATWDKF
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------------------------------------------HNNTKRIVSSGYRVIVSSSEFYYLDCGHGDFLGNNSLYDQQ-T---------------GSDTGNGGSWCGPFKTWQTI
    GRMZM5G860235_P01_ZE ------------------------------------------PNNTKLIVQAGYRAIVSSASFYYLDCGHGDFVGNNSIYDDP-N---------------SDFDANGGSWCGPYKTWQRV
    At1g05590.1_ARATH    ------------------------------------------PENTKRIVAAGYRVIVSSSEFYYLDCGHGGFLGNDSIYDQK--------------------ESGGGSWCAPFKTWQSI
    GSMUA_Achr11T11370_0 ------------------------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ------------------------------------------PGVCPKAVAKGFRCIVSNQGVWYLDHLD--------------------------------------------IPWEDF
    PDK_30s998691g002_PH ------------------------------------------PNNTKLIVSAGYRTIVSSSDFYYLDCGHGDFVGNDSSYDQI-G---------------SDSGGDGGSWCGPFKTWQRV
    At3g55260.1_ARATH    ------------------------------------------SDICQKAVAKGFRCIFSNQGYWYLDHLD--------------------------------------------VPWEEV
    MDP0000798095_MALDO  ------------------------------------------SGVCPKAVAKGFRCIFSNQGVWYLDHLD--------------------------------------------VPWDVT
    Glyma18g52290.1_GLYM ------------------------------------------PGVCPKVVAKGFRCIYSNQGVWYLDHLD--------------------------------------------VPWDEV
    GSMUA_AchrUn_randomT ------------------------------------------GGVAQKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------VPWQKF
    Cucsa.177460.1_CUCSA ------------------------------------------VNNTKRIVSSGYRAIVSSSEYYYLDCGHGDFIGNNSQYDEQ-A---------------NGEYKNGGSWCGPFKTWETV
    GSVIVP00009337001_VI -----------------------------------------------------------------------------------------------------------------------F
    POPTR_0008s07890.1_P ------------------------------------------GGVAEQVVASGLRCIVSNQDKWYLDHLD--------------------------------------------TPWEEF
    Glyma20g38400.1_GLYM ------------------------------------------PGVCPKAVAKGFRCIFSNQGVWYLNYLN--------------------------------------------VPWDDV
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   ------------------------------------------TNNTKKIVEAGYQAIVSSSEFYYLDCGHGDFLGNDSIYDQQTA---------------GGNSGNGGSWCEPFKTWQTI
    cassava4.1_007813m_M ------------------------------------------PNNTKLIVSAGYRAIVSSSEFYYLDCGHGDFLGNDSQYNQPPT---------------GGDTGNGGSWCGPFKTWQTI
    Bradi1g23740.1_BRADI ------------------------------------------SNNTKLIVQAGYRAIVSSASFYYLDCGHGDFVGNNAVYDDP-R---------------SDYDTNGGSWCGPFKTWQRV
    Cucsa.178740.1_CUCSA ------------------------------------------TGVAQKVVAAGLRCIVSNQDSWYLDHID--------------------------------------------TSWEKF
    28180.m000376_RICCO  -----------------------------------------------------------------IDNLK--------------------------------------------MNF---
    Selmo_422160_SELMO   ------------------------------------------TQIPPNTVSSGLKSIVSEQFSWSH------------------------------------------------------
    Os05g34320.1_ORYSA   ------------------------------------------GGVAEKVVAAGLRCIVSNQDKWYLDHLE--------------------------------------------VTWDGF
    GSVIVP00009334001_VI ------------------------------------------GGVAEKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------APWEGF
    GSMUA_Achr2T07820_00 ------------------------------------------PNNTKRLTAAGYRVIVSSSDFYYLDCGFGGW------------------------------------------SWQRV
    Sb02g037280.1_SORBI  ------------------------------------------ANNTKLIVQAGYRAIVSSASFYYLDCGHGDFVGNNSIYDDP-N---------------SDYDTDGGSWCGPYKTWQRV
    Selmo_422139_SELMO   ------------------------------------------PQIAPDVVESGLKCIVSEQSSWYLDHIE--------------------------------------------IPWEKF
    POPTR_0001s23930.1_P ------------------------------------------PNNTKLIVSSGYRAIVSSSEFYYLDCGHGDFPGNDSQYDPPPT---------------SGDSGNGGSWCGPFKTWQTI
    GRMZM2G034598_P01_ZE ------------------------------------------PGVCPKVVAKGFRCIMSNQGVWYLDHLD--------------------------------------------VPWEDV
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  ------------------------------------------PNNTKLIVDAGYRAIVSSSEFYYLDCGHGDFLGNDSQYDQPPT---------------ANDTGNGGSWCGSFKTWQTI
    cassava4.1_004406m_M ------------------------------------------PNNTKLIVSAGYRAIVSSSEFYYLDCGHGDFIGNDSQYNQPPT---------------SGDSGN-GSWCGPFKTWQAI
    GRMZM2G134251_P01_ZE ------------------------------------------AENTKRIVAAGYRAIVSSASYYYLDCGHGGWVGNDSRYDVQEKEH-------DGMPLFNDPGGTGGSWCAPFKTWQRI
    POPTR_0010s21790.1_P ------------------------------------------GGVCAKAVAKGFRCIFSNQGFWYLDHLD--------------------------------------------VPWYEV
    Bradi2g25310.1_BRADI ------------------------------------------GGVAEKVVSAGLRCIVSNQDKWYLDHLD--------------------------------------------ATWEGF
    Sb09g020420.1_SORBI  ------------------------------------------SGVAEKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------ATWEGF
    Phypa_90762_PHYPA    ------------------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P ------------------------------------------PNNTKLIVSSGYRAIVSSSEFYYLDCGHGGFLGNDSQYDPPPT---------------SGGSGNGGSWCAPFKTWQTI
    supercontig_88.33_CA ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00029535001_VI ------------------------------------------PGVCPKAVAKGFRCIYSNQGVWYLDHLD--------------------------------------------VPWDGF
    POPTR_0008s04960.1_P ------------------------------------------------------------CVFLYLDHLD--------------------------------------------APWDDV
    Os01g66700.1_ORYSA   ------------------------------------------EDVAPKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------ATWEGF
    Tc00_g000370_THECC   ------------------------------------------PGVCPKAVAKGFRCIFSNQGVWYLDHLD--------------------------------------------VPWDQV
    Bradi1g69660.1_BRADI ------------------------------------------AENTKRIVAAGYRAIVSSAAYYYLDCGHGGWVGNDSRYDKQEKES-------EGMPLFNDPGGNGGSWCAPFKTWQRL
    GSMUA_Achr11T11280_0 -----------------------------------------------------FFLICHVCSNWY----------------------------------------------------QAI
    Os03g11980.1_ORYSA   ------------------------------------------PENTKRVVAAGYRAIVSSASYYYLDCGHGGWVGNDSRYDKQEKER-------EGTPLFNDPGGTGGSWCAPFKTWQRV
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   ------------------------------------------TQIPPNTVSSGLKSIVSEQFSWYLDHID--------------------------------------------IPWEEF
    Glyma08g17200.1_GLYM ------------------------------------------HNNTKRIVSSGYRTIVSSSDFYYLDCGHGDFVGNNSIYDQQ-N---------------GDNKDNGGSWCGPFKTWQTI
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   ------------------------------------------TQIPPNTVSSGLKSIVSEQFSWYLDHID--------------------------------------------IPWQEF
    GRMZM2G121514_P01_ZE ------------------------------------------SGVAEKVVAAGLRCIVSNQDKWYLDHLD--------------------------------------------ATWEGF
    Selmo_441789_SELMO   ------------------------------------------AINTKAVTSAGYRAVVSSSDFLYLDCGRGDFLLNDSRFDQPNRTVVPPSLSITGDDASFNYGGSGGSWCAPYKTWQRI
    Os05g32410.1_ORYSA   -------------------------------------------ESAAATVASSFRRIAAATI----------------------------------------------------------
    28180.m000377_RICCO  ------------------------------------------GGVCAKAVAKGFRCIFSNQGFWYLDHLD--------------------------------------------VPWYEV

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P YMNEPLKNI------------SKPEQQKLVIGGEVCMWGEHI-DTSDIEQTI--------------------------------WPRAAA------------------------------
    Cucsa.165600.1_CUCSA YHADPLEGI------------SDPSQQKLIIGGEVCMWGETA-DASNVMQTI--------------------------------WPRAAT------------------------------
    Cre22.g762950.t1.1_C WAQEPLAGL------------GSAAQRALVIGGEACMWGEYV-DATNLMSRT--------------------------------WPRASA------------------------------
    Bradi2g37460.1_BRADI YTTEPLAGI------------NDTEQQKLVLGGEVCMWGETA-DTSDVQQTI--------------------------------WPRAAA------------------------------
    Glyma02g10570.1_GLYM YTTEPLQGI------------HIASEQELVIGGEVCMWGETA-DTSNVQQTI--------------------------------WPRAAA------------------------------
    Selmo_422155_SELMO   YNKEPYDSI------------TDGREQQLILGGEVCMWGEKV-DGSNIHQII--------------------------------WPRAAA------------------------------
    47890.m000013_RICCO  YQADAPPAG------------LSDEERARVLGLHVALWTEYVRTTEQTDRMI--------------------------------WPRASV------------------------------
    Glyma15g41990.1_GLYM YNYDIAYG-------------LSEEEEKLVLGGEVALWTEQA-DSTVLDGRI--------------------------------WPRSSA------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI YMNEPLTNI------------TNHQQQKLILGGEVCMWGEHI-DASDIEQTI--------------------------------WPRAAA------------------------------
    cassava4.1_033064m_M YMNEPLTNI------------TNTEQQKLVIGGEVCMWGETI-DGSDIEQTI--------------------------------WPRAAA------------------------------
    supercontig_197.23_C YNYDITDG-------------LSKEEAELVLGGEVALWSEQA-DPTVLDARL--------------------------------WPRAAA------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI YNYDITYG-------------LSDEEAKLVLGGEVALWSEQA-DPTVLDARI--------------------------------WPRASA------------------------------
    Sb01g042640.1_SORBI  YDYDILHG-------------LTEDEARRVLGGEVALWSEQS-DAAVLDSRL--------------------------------WPRASA------------------------------
    GSMUA_Achr5T28320_00 YNTEPLEGI------------NNITQQKLVLGGEVCMWGEAV-DTSNVQQTI--------------------------------WPRAAA------------------------------
    At1g65590.1_ARATH    YANEPFQNI------------TDKKQQSLVLGGEVCMWGEHI-DASDIEQTI--------------------------------WPRAAA------------------------------
    Selmo_445016_SELMO   YKNEPLTNI------------TGEHEQSLIIGGEVCMWGETV-DPSDIHQTI--------------------------------WPRAAA------------------------------
    Selmo_429325_SELMO   YSKEPYDNI------------ASHKEQQLIIGGERGFGAHLM-SQQLRQDRLLRNKPTLKAIDCEEDEDMGGWRISMLVPKFSIWIDGKVQLMHSDFEEIDKMAMNLTRSLEENHDSLVP
    Tc05_g015670_THECC   YANEPLTNI------------TNLKQQKLVIGGEVCMWGERI-DGSDIEQTI--------------------------------WPRAAA------------------------------
    cassava4.1_021615m_M YEAEPLEGI------------NITSQQDLVLGGEVCMWGETA-DASDIQQTI--------------------------------WPRAAA------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  YMNEPLTNI------------TNIEQQKLVIGGEVCMWGETV-DASNIEQTI--------------------------------WPRAAA------------------------------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI YMNEPLKGI------------DNPEQQRLVIGGEVCMWGEQI-DASDIEQTI--------------------------------WPRAAA------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT YNYDITYG-------------LTEEEAKLVLGGEVALWSEQA-DETVLDSRL--------------------------------WPRTSA------------------------------
    Os07g38790.1_ORYSA   YDYDVAGG-------------LTAEEARLVVGGEVAMWTEQV-DAAVLDGRV--------------------------------WPRASA------------------------------
    Glyma10g43710.1_GLYM YTAEPLEGI------------RKASEQKLVLGGEVCMWGETA-DTSDVQQTI--------------------------------WPRAAA------------------------------
    Glyma08g16970.1_GLYM YNYDIAYG-------------LSEGEAKLVLGGEVALWSEQS-DPTVLDARI--------------------------------WPRASA------------------------------
    Sb09g001670.1_SORBI  YSGEPLDGI------------SDKDQQKLVLGGEVCMWGETA-DTSDVLQTI--------------------------------WPRAAA------------------------------
    Os05g02510.1_ORYSA   YTSEPLAGI------------NNTAQQKLVLGGEVCMWGETA-DTSDVQQTI--------------------------------WPRAAA------------------------------
    Bradi3g44610.1_BRADI YMNEPLANI------------YNPEQQKLILGGEVCMWGERI-DASDIQQTI--------------------------------WPRAAA------------------------------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI Y-----------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  YDFIPLDYMKNASPPLAGKVGLTDSGRRHVRGMEATLFTETVRDPSLIDYLV--------------------------------MPRLLA------------------------------
    Phypa_128384_PHYPA   YETEPFSNI------------ENKDEQDLMLGGEVCMWGETA-DESNILQTI--------------------------------WPRAAA------------------------------
    POPTR_0009s03010.1_P ---------------------MEQRSKQHKTGCFFCL------QIYCVILRV--------------------------------------------------------------------
    MDP0000564236_MALDO  YNYDITYG-------------LTEDEAKLVLGGEVALWSEQA-DPTVLDARI--------------------------------WPRTSA------------------------------
    GRMZM5G860235_P01_ZE YDYDIAYG-------------LTPEEAQLVLGGEVAMWTEQV-DTTVLDGRV--------------------------------WPRASA------------------------------
    At1g05590.1_ARATH    YNYDIADGL------------LNEEERKLVLGGEVALWSEQA-DSTVLDSRL--------------------------------WPRASA------------------------------
    GSMUA_Achr11T11370_0 ------------------------------------MWGESI-DASDIEQTI--------------------------------WPRAAA------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH YNSEPLDGI------------NSTLQQELVLGGEVCMWGETA-DTSVVQQTI--------------------------------WPRAAA------------------------------
    PDK_30s998691g002_PH YDYDITYG-------------LSEDEAKLVLGGEVALWSEQA-DPTVLDSRM--------------------------------WPRASA------------------------------
    At3g55260.1_ARATH    YNTEPLNGI------------EDPSLQKLVIGGEVCMWGETA-DTSVVLQTI--------------------------------WPRAAA------------------------------
    MDP0000798095_MALDO  YDAEPLEGI------------TDISQQKLVIGGEVCMWGETA-DTSDVQQTI--------------------------------WPRAAA------------------------------
    Glyma18g52290.1_GLYM YTAEPLQGI------------HTASEQELVIGGEVCMWGETA-DTSNVQQTI--------------------------------WPRAAA------------------------------
    GSMUA_AchrUn_randomT YMNEPLTNI------------STPEQQKLVIGGEVCMWGESI-DASDIEQTI--------------------------------WPRAAA------------------------------
    Cucsa.177460.1_CUCSA YDYDITYG-------------LSKEEAKLVLGGEVALWSEQA-DPTVLDARL--------------------------------WPRTSA------------------------------
    GSVIVP00009337001_VI Y-----------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P YKNEPLTNI------------TNPEQQSLVLGGEVCMWGETV-DGSDIEQTI--------------------------------WPRAAA------------------------------
    Glyma20g38400.1_GLYM YTAEPLEGI------------RKASEQKLVLGGEVCMWGETA-DTSDIQQTI--------------------------------WPRAAA------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   YNYDITYG-------------LSEEEAKLVLGGEVALWSEQA-DPTVLDPRI--------------------------------WPRTSA------------------------------
    cassava4.1_007813m_M YNYDITYG-------------LSQEEAKLVLGGEVALWSEQA-DPTVLDARI--------------------------------WPRASA------------------------------
    Bradi1g23740.1_BRADI YDYDIAHG-------------LTAEEAKLVIGGEVALWTEQA-DTTVLDARI--------------------------------WPRASA------------------------------
    Cucsa.178740.1_CUCSA YANEPLQNI------------KNPRQQKLVIGGEVCMWGEVV-DASNIEQTI--------------------------------WPRAAA------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   YMNEPLRNI------------KNPAQQKLVLGGEVCMWAEHI-DASDIQQTI--------------------------------WPRAAA------------------------------
    GSVIVP00009334001_VI YMNEPLTNI------------TNHQQQKLVLGGEVCMWGEHI-DASDIEQTI--------------------------------WPRAAA------------------------------
    GSMUA_Achr2T07820_00 YDYDITHG-------------LSAAEAELVLGGEVALWSEQA-DGAVMDGRL--------------------------------WPRAAA------------------------------
    Sb02g037280.1_SORBI  YDYDITYG-------------LTAEEAQLVIGGEVAMWTEQV-DTAVLDGRV--------------------------------WPRASA------------------------------
    Selmo_422139_SELMO   YSKEPFDNV------------TSEIEQELIIGGEVCMW----------------------------------------------------------------------------------
    POPTR_0001s23930.1_P YNYDIAYG-------------LTPEETKLVLGGEVALWSEQA-DPTVLDVRI--------------------------------WPRASA------------------------------
    GRMZM2G034598_P01_ZE YSGEPLAGI------------SDREQQKLVLGGEVCMWGETA-DTSDVLQTI--------------------------------WPRAAA------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  YNYDITYG-------------LSEKEAELVLGGEVALWSEQA-DPAVLDVRL--------------------------------WPRTSA------------------------------
    cassava4.1_004406m_M YNYDITYG-------------LSQEETKLVLGGEVALWSEQA-DPTVLDARI--------------------------------WPRASA------------------------------
    GRMZM2G134251_P01_ZE YDYDILHG-------------LTEDEARRVLGGEVALWSEQS-DAAVLDGRL--------------------------------WPRASA------------------------------
    POPTR_0010s21790.1_P YKAEPLEGI------------NDTSMQELVLGGEVCMWSETA-DTSVVQQTI--------------------------------WPRAAA------------------------------
    Bradi2g25310.1_BRADI YMNEPLTNI------------YNPEQQKLILGGEVCMWGERI-DASDIQQTI--------------------------------WPRAAA------------------------------
    Sb09g020420.1_SORBI  YTNEPLTNI------------YNPEQQKLVLGGEVCMWGEHI-DASDIQQTI--------------------------------WPRAAA------------------------------
    Phypa_90762_PHYPA    -----------------------SRDMNLMIGGEVCMWVETV-DGSDTLQTR--------------------------------WPCAAA------------------------------
    POPTR_0001s23910.1_P YNYDIAYG-------------LTPEETKLVLGGEVALWSEQA-DPTVLDVRI--------------------------------WPRASA------------------------------
    supercontig_88.33_CA ---------------------------------------------------------------------------------------AYN------------------------------
    GSVIVP00029535001_VI YNAEPLEGI------------NSASEQELVLGGEVCMWSEVA-DTSNVLQTI--------------------------------WPRAAA------------------------------
    POPTR_0008s04960.1_P YKAELLEGK------------NDTSIQELVIGGEVCMWAETA-DASVVHRTI--------------------------------WPRAAA------------------------------
    Os01g66700.1_ORYSA   YTNEPLKGI------------DDPEQQSLVIGGEVCMWGEQI-DASDIEQTI--------------------------------WPRAAA------------------------------
    Tc00_g000370_THECC   YNAEPLEGI------------NNVSEQNLVLGGEVCMWCETA-DTSNVQQTI--------------------------------WPRAAA------------------------------
    Bradi1g69660.1_BRADI YDYDILHG-------------LTEEEATLVLGGEVALWSEQS-DAAVLDGRL--------------------------------WPRAAA------------------------------
    GSMUA_Achr11T11280_0 HMLSNMSNV------------SSHH-----------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   YDYDILHG-------------LTDDEAQLVLGGEVALWSEQS-DETVLDARL--------------------------------WPRAAA------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   YSKEPYDNI------------ASHKEQQLIIGGEVCMWGEKV-DAANIQQRI--------------------------------WPRAAA------------------------------
    Glyma08g17200.1_GLYM YNYDIAYG-------------LSEEEAKLVLGGEVALWTEQA-DSTVLDGRI--------------------------------WPRTSA------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------NPRARST-----------------------------
    Selmo_429308_SELMO   YSKEPYDNI------------SSHKEQQLIIG----------------------------------------------------------------------------------------
    GRMZM2G121514_P01_ZE YTNEPLTNI------------YNPEQQKLVLGGEVCMWGEHI-DASDIQQTI--------------------------------WPRAAA------------------------------
    Selmo_441789_SELMO   YDFDLAYG-------------LTRQEAALVIGAEAALWSELA-DANVLDGLV--------------------------------WPRTSA------------------------------
    Os05g32410.1_ORYSA   --------------------------AELPMNGSC-------------NHRR--------------------------------TPTDSA------------------------------
    28180.m000377_RICCO  YNAEPLEGI------------DNASEQELVLGGEVCMWGETA-DTSDVQQTI--------------------------------WPRAAA------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1560
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ----------------------------------------AADPISLS----------------------------------AKVSIILLSSMKILNDK----VRCPIMSPVKER-----
    Cucsa.165600.1_CUCSA ----------------------------------------AAERLWSK-----------------NETVS---------GNITLSVLPRLSYFRCLLNR-----RGVEAAPVKN------
    Cre22.g762950.t1.1_C ----------------------------------------VAERLWSAPLEPDNNDNNDDNDNNTQRQQQQRQQQQQQQQEAEEDAAARIAVHRCRLLA-----RGIPAQPLAPG-----
    Bradi2g37460.1_BRADI ----------------------------------------AAERMWSP-----------------LEAISV--------QD-QTIVLARLHYFRCLLNH-----RGIAAAPVTN------
    Glyma02g10570.1_GLYM ----------------------------------------AAERLWSQ-----------------RDSTS---------QNITLIALPRLLNFRCLLNR-----RGVPAAPVTN------
    Selmo_422155_SELMO   ----------------------------------------AAEKFWSP-----------------FSVTNL----------GPHKAGDRMETFRRLLNE-----RGI-------------
    47890.m000013_RICCO  ----------------------------------------LAEIGWSS------------------------------APREWEAFAPRLLAEIKRQQS---LGLSMDLTPLEPMGRFTA
    Glyma15g41990.1_GLYM ----------------------------------------LAESLWSE-----------------NRDEKG--------MKRYAEATDRLNEWRSRMVS-----RGIGAEPIQP------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ----------------------------------------AAGT---------------------YHFILR---------------LKSIAHYFFFFDK---------------------
    cassava4.1_033064m_M ----------------------------------------AAERLWTT-----------------YDKLAK----------DPKRVTRRLAHFRCLLNQ-----RGVAAAPLAG------
    supercontig_197.23_C ----------------------------------------MAETLWSG-----------------NRDEKG--------MKRYAEATDRLNEWRHRMVS-----RGIQTEPIQP------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI ----------------------------------------MAEALWSG-----------------NQDKTG--------MKRYADAMDRLNEWRYRMVA-----RGIGAEPIQP------
    Sb01g042640.1_SORBI  ----------------------------------------AAETLWSG-----------------NKGSNG--------RKRYANATVRLNEWRHRMVA-----RGIRAEPIQP------
    GSMUA_Achr5T28320_00 ----------------------------------------AAERLWSS-----------------WEATSV--------GNLNTTVLPRLHYFRCLLNH-----RGIAAAPVTN------
    At1g65590.1_ARATH    ----------------------------------------AAERLWTP-----------------YAKLAK----------NPNNVTTRLAHFRCLLNQ-----RGVAAAPLVG------
    Selmo_445016_SELMO   ----------------------------------------AAERLWSP-----------------RSFTDQ----------GTSQVHSRLKTFRCLLQQ-----RGIPAAPVDE------
    Selmo_429325_SELMO   YSRSACSDLGAGCGNAAFRKNVSCWIEQDVCCSSAIRIRASQLRRFTV-----------------FQSQRMFEVVRWKENIHPIYRAHSLEYIR-LCNELYSHPENSKAQFVHI------
    Tc05_g015670_THECC   ----------------------------------------AAERLWTP-----------------YDELAK----------DPRQVTGRLAHFRCLLNQ-----RGVAAAPLAG------
    cassava4.1_021615m_M ----------------------------------------AAERLWSR-----------------REDISS--------GNISLTALPRFHYFRCLLNR-----RGVQAAPVTN------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ----------------------------------------AAERLWTS-----------------YDKLAK----------NPREVTGRLAHFRCLLNQ-----RGVAAAPVAG------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI ----------------------------------------AAERLWTP-----------------IEKLAE----------DPRSATSRLSRFRCLLNQ-----RGVAAAPLAG------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ----------------------------------------MAESLWSG-----------------NRDEKG--------LKRYAEATDRLNEWRSRMVS-----RGIGAEPIQP------
    Os07g38790.1_ORYSA   ----------------------------------------MAEALWSG-----------------NRDATG--------RKRYAEATDRLTDWRHRMVG-----RGVRAEPIQP------
    Glyma10g43710.1_GLYM ----------------------------------------AAERLWSR-----------------RDSTS---------GNVNIIALPRLHYFRCLLNR-----RGIPAAPVKN------
    Glyma08g16970.1_GLYM ----------------------------------------LAESMWSG-----------------NRDEKG--------VKRYAEATDRLNEWRSRMVS-----RGIGAEPIQP------
    Sb09g001670.1_SORBI  ----------------------------------------AAERLWSQ-----------------LEAITA--------QDVETTVLSRLHYFRCLLNH-----RGIAAAPVTN------
    Os05g02510.1_ORYSA   ----------------------------------------AAERMWSQ-----------------LEAISA--------QDLETTVLARLHYFRCLLNH-----RGIAAAPVTN------
    Bradi3g44610.1_BRADI ----------------------------------------AAGIISNP-----------------LH-----------------------------LN----------IIYLAK------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  ----------------------------------------VAERAWAP-----------------DPAWATETDAAQAVVLHRAAWSGFVNVLGQRVLPRLDLEKTGVAYRLAPPGLMLD
    Phypa_128384_PHYPA   ----------------------------------------AAERLWST-----------------LEYTKV----------GHTQAVSRFQHFRCLLNR-----REIPAAPIFY-----G
    POPTR_0009s03010.1_P ----------------------------------------LLLGLWALWFCWE-------------------------------------------------------------------
    MDP0000564236_MALDO  ----------------------------------------LAESLWSG-----------------NRDAMG--------MKRSAEATDRLNEWRSRIVA-----RGVRAEPIQP------
    GRMZM5G860235_P01_ZE ----------------------------------------MAEALWSG-----------------NRDASG--------RKRYAEATDRLIDWRQRMVG-----RGVRAEPIQP------
    At1g05590.1_ARATH    ----------------------------------------LAESLWSG-----------------NRDERG--------VKRCGEAVDRLNLWRYRMVK-----RGIGAEPIQP------
    GSMUA_Achr11T11370_0 ----------------------------------------AAERLWTP-----------------LDKLAK----------DPRQATGRLARFRCLLNQ-----RGVAAAPVAG------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ----------------------------------------AAERLWSP-----------------LDATSA--------GNLNSTVLPRLHYFRCLLNH-----RGVAAAPVNN------
    PDK_30s998691g002_PH ----------------------------------------MAETLWSG-----------------NRDQRG--------KKRYAEATDRLNDWRHRMVG-----RGIRAEPIQP------
    At3g55260.1_ARATH    ----------------------------------------AAERMWST-----------------REAVSK--------GNITLTALPRLHYFRCLLNN-----RGVPAAPVDN------
    MDP0000798095_MALDO  ----------------------------------------AAERLWSR-----------------RGVTSR--------GNSYATALSRLQYFRCLLNR-----RGVQAAPVTN------
    Glyma18g52290.1_GLYM ----------------------------------------AAERLWSQ-----------------RDSTS---------QNITLIALPRLQNFRCLLNR-----RGVPAAPVTN------
    GSMUA_AchrUn_randomT ----------------------------------------AAGNTGKN------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA ----------------------------------------MAEALWSG-----------------NRDETG--------KKRYAEATDRLNEWRYRMVN-----RGIGAEPIQP------
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P ----------------------------------------AAERLWTP-----------------YDKLAK----------DPEKVAGRLAHFRCLLNQ-----RGVAAAPLAG------
    Glyma20g38400.1_GLYM ----------------------------------------AAERLWSQ-----------------RDSTS---------GNANIIALRRLHYFRCLLNR-----RGVPAAPVNN------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   ----------------------------------------MAETLWSG-----------------NRDETG--------NKRYAEATDRLNEWRYRMVT-----RGIKAEPLQP------
    cassava4.1_007813m_M ----------------------------------------MAETLWSG-----------------NRDETG--------RKRYAEAMDRLNEWRYRMVS-----RGIGAEPLQP------
    Bradi1g23740.1_BRADI ----------------------------------------MAEALWSG-----------------NRDATG--------KKRYAEATDRLNDWRQRMVG-----RGVRAEPIQP------
    Cucsa.178740.1_CUCSA ----------------------------------------AAERLWTQ-----------------YDNLAK----------DPRQVFARLAHFRCLLNQ-----RGIDAAPVSG------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   ----------------------------------------AAERLWTP-----------------FEKLSK--------EWEIAALSARLARFRCLLNH-----RGIAAGPVTG------
    GSVIVP00009334001_VI ----------------------------------------AAERLWSA-----------------YDNLAK----------DPSQVFGRLAHFRCLLNQ-----RGVAAAPLVG------
    GSMUA_Achr2T07820_00 ----------------------------------------MAEALWSG-----------------NRDGDG--------RKRYAEATDRLHEWRQRMVR-----RGIAAEPIQP------
    Sb02g037280.1_SORBI  ----------------------------------------MAEALWSG-----------------NRDASG--------RKRYAEATDRLIDWRQRMVG-----RGIRAEPIQP------
    Selmo_422139_SELMO   ------------------------------------------ERLWSP-----------------SKVTSL----------GPENAAPRLEFFRSLLNE-----RGIAASPLHP------
    POPTR_0001s23930.1_P ----------------------------------------MAETLWSG-----------------NRDESG--------KKRYAEAMDRLNDWRHRMVN-----KGIRAEPLQP------
    GRMZM2G034598_P01_ZE ----------------------------------------AAERLWSQ-----------------LEAISA--------QDVETTVLSRLHRFRCLLNH-----RGVAAAPVTN------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  ----------------------------------------MAETLWSG-----------------NRDETG--------MKRYAEAMDRLNEWRYRMVS-----RGIRAEPLQP------
    cassava4.1_004406m_M ----------------------------------------MAETLWSG-----------------NRDESG--------MKRYAEAMDRLNEWRYRMVS-----RGIRAEPLQP------
    GRMZM2G134251_P01_ZE ----------------------------------------AAETLWSG-----------------NKGSNG--------RKRYANATVRLNEWRYRMVA-----RGIRAEPIQP------
    POPTR_0010s21790.1_P ----------------------------------------AAERLWSN-----------------RETISS--------GNITLTALPRLHYFRCLLNR-----RGVQAAPVTN------
    Bradi2g25310.1_BRADI ----------------------------------------AAERLWTP-----------------VEKLAK----------GATVVTARLARFRCLLNE-----RGVAAAPLAG------
    Sb09g020420.1_SORBI  ----------------------------------------AAERLWTP-----------------IEKLAK----------DTRSVTARLARFRCLLNQ-----RGVAAAPLAG------
    Phypa_90762_PHYPA    ----------------------------------------AAERLWSA-----------------LNFTKQ----------GHIQALKRFQDFRYLLNR-----RGVAAAPVLYG-----
    POPTR_0001s23910.1_P ----------------------------------------MAETLWSG-----------------NRDESG--------KKRYAEAMDRLNEWRHRMVN-----KGIRAEPLQP------
    supercontig_88.33_CA ----------------------------------------ASERLWTP-----------------YVKLAK----------DPAQVTGRLAHFRCLLNQ-----RGIAAVPLAG------
    GSVIVP00029535001_VI ----------------------------------------AAERLWSK-----------------REATSG--------KNITLTALPRLHYYRCLLTR-----RGVEADPVTN------
    POPTR_0008s04960.1_P ----------------------------------------GTPIVKCV-----------------------------IVKSDVKKMKSTMEFFNIFSGTSD-------------------
    Os01g66700.1_ORYSA   ----------------------------------------AAERLWTP-----------------IEKIAE----------DPRLVTSRLARFRCLLNQ-----RGVAAAPVAG------
    Tc00_g000370_THECC   ----------------------------------------AAERLWSK-----------------REPVSA--------RNITLTALPRYQYFRCLLNR-----RGVQAAPATN------
    Bradi1g69660.1_BRADI ----------------------------------------AAETLWSG-----------------NKGASG--------RKRYANATDRLNDWRHRMVA-----RGIRAEPLQP------
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   ----------------------------------------AAETLWSG-----------------NKGSNG--------KKRYANATDRLNDWRHRMVE-----RGIRAEPIQP------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   ----------------------------------------AAGKLASL-----------------YLLDIFFLANNFYFGLGPKNAAPRLEFFRSLLNE-----RGIAASPVKS------
    Glyma08g17200.1_GLYM ----------------------------------------LAESLWSG-----------------NRDEKG--------MKRYAEATDRLNEWRSRMVS-----RGIGAEPIQP------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   ------------------------------------------ERLWSP-----------------FTVTDL----------GPKNAAPRLEFFRILLNE-----RGIAASPVKS------
    GRMZM2G121514_P01_ZE ----------------------------------------AAERLWTP-----------------IEKLAK----------DTRSVTARLARFRCLLNQ-----RGVAAAPLAG------
    Selmo_441789_SELMO   ----------------------------------------LAEVTWSG-----------------NRDSSS--------KKRTTEAGKRLVEWRERMVS-----RGVAAHPMMP------
    Os05g32410.1_ORYSA   ----------------------------------------P-----TS-----------------HRDHR---------------PPSLMNRHRNHHQA-----PVADESPPQP------
    28180.m000377_RICCO  ----------------------------------------AAERLWSR-----------------RESISL--------RNINETALPRLQYFRCLLNR-----RGVPAAPVTN------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1570      1580      1590      1600      1610      1620      1630      1640      1650      1660      1670      1680
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    PDK_30s1119031g009_P ------------------------------------------------------------------------------------------------------------------------
    Cucsa.165600.1_CUCSA ---FYARRPPTGPGSC--------------------------------------------------------------------------------------------------------
    Cre22.g762950.t1.1_C ACPNDGDFDDVSSGSREEEQAE--------------------------------------------------------------------------------------------------
    Bradi2g37460.1_BRADI ---YYARRPPIHPGSC--------------------------------------------------------------------------------------------------------
    Glyma02g10570.1_GLYM ---YYARRAPVGPGSC--------------------------------------------------------------------------------------------------------
    Selmo_422155_SELMO   ------------------------------------------------------------------------------------------------------------------------
    47890.m000013_RICCO  AGGGKVRAVLDQPAALGTLRYTLDGSAPRSASPAYSEPLLLGGGTVLTVRAFADAEPLGSARNWRMSAALTRTLARRRDGH---------------------------------------
    Glyma15g41990.1_GLYM ------LWSVRNPGMCNT------------------------------------------------------------------------------------------------------
    GSVIVP00009338001_VI ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00008023001_VI ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033064m_M ----PGRGAPQEPGSC--------------------------------------------------------------------------------------------------------
    supercontig_197.23_C ------LWCIRNPGMCNTVHPT--DT----------------------------------------------------------------------------------------------
    MDP0000129369_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11230_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00003707001_VI ------LWCIRNPGMCNTVHPF--V-----------------------------------------------------------------------------------------------
    Sb01g042640.1_SORBI  ------LWCPMHPHMCNLSQ----------------------------------------------------------------------------------------------------
    GSMUA_Achr5T28320_00 ---KHAREAPYGPASC--------------------------------------------------------------------------------------------------------
    At1g65590.1_ARATH    ----GGRVVPFEPGSC--------------------------------------------------------------------------------------------------------
    Selmo_445016_SELMO   ----LGRVSPPYPGSC--------------------------------------------------------------------------------------------------------
    Selmo_429325_SELMO   HTMEDQTNASKVPACSISEPDLSRRTDENASKPPPNGFLRRAGSSVFQRATSFVSRGKQANLEEGNMRFDGACIESTAAMNTNLGPQEHRELPEARKNSPALYVQCSEYYSRDGISHLAA
    Tc05_g015670_THECC   ----QGRAAPEGPGSC--------------------------------------------------------------------------------------------------------
    cassava4.1_021615m_M ---FFAREPPLGPGSC--------------------------------------------------------------------------------------------------------
    supercontig_88.30_CA ------------------------------------------------------------------------------------------------------------------------
    29929.m004503_RICCO  ----PGRGAPLEPGSC--------------------------------------------------------------------------------------------------------
    Selmo_422260_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Bradi2g57420.1_BRADI ----DGRTAPYEPGPC--------------------------------------------------------------------------------------------------------
    GRMZM2G117405_P01_ZE ------------------------------------------------------------------------------------------------------------------------
    Medtr2g062560.1_MEDT ------LWCVRNPGMCNTVHAI--------------------------------------------------------------------------------------------------
    Os07g38790.1_ORYSA   ------LWCRNRPGMCNLVR----------------------------------------------------------------------------------------------------
    Glyma10g43710.1_GLYM ---FIARTAPVGPGSC--------------------------------------------------------------------------------------------------------
    Glyma08g16970.1_GLYM ------FYCVKNPGMCNTVHPV--------------------------------------------------------------------------------------------------
    Sb09g001670.1_SORBI  ---YYARRPPIGPGSC--------------------------------------------------------------------------------------------------------
    Os05g02510.1_ORYSA   ---SYARRPPIGPGSC--------------------------------------------------------------------------------------------------------
    Bradi3g44610.1_BRADI ----Y-------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11360_0 ------------------------------------------------------------------------------------------------------------------------
    GSVIVP00010037001_VI ------------------------------------------------------------------------------------------------------------------------
    34575.m000024_RICCO  GGRVLANHVLPGITLRYTSDGTTPTASSRMVDGAITDRGVIQVAAFDRNGRAGRVSRIDNP-----------------------------------------------------------
    Phypa_128384_PHYPA   SRFAYGRSSPYGPGSC--------------------------------------------------------------------------------------------------------
    POPTR_0009s03010.1_P ------------------------------------------------------------------------------------------------------------------------
    MDP0000564236_MALDO  ------LWCIRNPGMCNTVNSF--G-----------------------------------------------------------------------------------------------
    GRMZM5G860235_P01_ZE ------LWCRTRPGMCNAVQ----------------------------------------------------------------------------------------------------
    At1g05590.1_ARATH    ------LWCLKNPGMCNTVHGALQDQ----------------------------------------------------------------------------------------------
    GSMUA_Achr11T11370_0 ----PGRTAPLDPGSC--------------------------------------------------------------------------------------------------------
    supercontig_1696.1_C ------------------------------------------------------------------------------------------------------------------------
    PDK_30s699271g002_PH ---SLARQPPIGPGSC--------------------------------------------------------------------------------------------------------
    PDK_30s998691g002_PH ------LWCRTHPGMCDVVR----------------------------------------------------------------------------------------------------
    At3g55260.1_ARATH    ---FYARRPPLGPGSC--------------------------------------------------------------------------------------------------------
    MDP0000798095_MALDO  ---FYARSPPTWSGSC--------------------------------------------------------------------------------------------------------
    Glyma18g52290.1_GLYM ---YYARRAPVGPGSC--------------------------------------------------------------------------------------------------------
    GSMUA_AchrUn_randomT ------------------------------------------------------------------------------------------------------------------------
    Cucsa.177460.1_CUCSA ------LWCIRNPGMCDAVQVI--------------------------------------------------------------------------------------------------
    GSVIVP00009337001_VI ------------------------------------------------------------------------------------------------------------------------
    POPTR_0008s07890.1_P ----PGRGAPIEPGSC--------------------------------------------------------------------------------------------------------
    Glyma20g38400.1_GLYM ---FNARTAPVGPGSC--------------------------------------------------------------------------------------------------------
    PDK_30s883821g041_PH ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_033827m_M ------------------------------------------------------------------------------------------------------------------------
    Tc05_g024510_THECC   ------LWCVRNPGMCNTVNAF--------------------------------------------------------------------------------------------------
    cassava4.1_007813m_M ------LWCTRNPGMCNTVHPF--V-----------------------------------------------------------------------------------------------
    Bradi1g23740.1_BRADI ------LWCRTRPGMCDLVR----------------------------------------------------------------------------------------------------
    Cucsa.178740.1_CUCSA ----LGRSDPWGPGSC--------------------------------------------------------------------------------------------------------
    28180.m000376_RICCO  ------------------------------------------------------------------------------------------------------------------------
    Selmo_422160_SELMO   ------------------------------------------------------------------------------------------------------------------------
    Os05g34320.1_ORYSA   ----YGRSAPAEPSSC--------------------------------------------------------------------------------------------------------
    GSVIVP00009334001_VI ----PGRVAPEEPGSC--------------------------------------------------------------------------------------------------------
    GSMUA_Achr2T07820_00 ------LWCVMHPSMCNMVQ----------------------------------------------------------------------------------------------------
    Sb02g037280.1_SORBI  ------LWCRTRPGMCNAVQ----------------------------------------------------------------------------------------------------
    Selmo_422139_SELMO   QQRRDSLQPPDLPDSSSTMVNLSMDTDQR-------------------------------------------------------------------------------------------
    POPTR_0001s23930.1_P ------LWCIKNPGMCNTVHPS--D-----------------------------------------------------------------------------------------------
    GRMZM2G034598_P01_ZE ---YYARRPPVGPGSC--------------------------------------------------------------------------------------------------------
    cassava4.1_023099m_M ------------------------------------------------------------------------------------------------------------------------
    29616.m000216_RICCO  ------LWCIRNPGMCNTVHPL--V-----------------------------------------------------------------------------------------------
    cassava4.1_004406m_M ------LWCIKNPGMCNTVNPF--V-----------------------------------------------------------------------------------------------
    GRMZM2G134251_P01_ZE ------LWCPMHPRMCNLSQ----------------------------------------------------------------------------------------------------
    POPTR_0010s21790.1_P ---YYARQPPSGPGSC--------------------------------------------------------------------------------------------------------
    Bradi2g25310.1_BRADI ----YGRTAPLEPGSC--------------------------------------------------------------------------------------------------------
    Sb09g020420.1_SORBI  ----YGRSAPSEPGSC--------------------------------------------------------------------------------------------------------
    Phypa_90762_PHYPA    KHSAVGRA----------------------------------------------------------------------------------------------------------------
    POPTR_0001s23910.1_P ------LWCIKNPGMCNTVHPS--D-----------------------------------------------------------------------------------------------
    supercontig_88.33_CA ------------PGHVALKSLVLVTYNDMILKWPPDKI----------------------------------------------------------------------------------
    GSVIVP00029535001_VI ---KYARQPPNGPGSC--------------------------------------------------------------------------------------------------------
    POPTR_0008s04960.1_P ------------------------------------------------------------------------------------------------------------------------
    Os01g66700.1_ORYSA   ----YGRTAPYEPGPC--------------------------------------------------------------------------------------------------------
    Tc00_g000370_THECC   ---KYARSPPNGPGSC--------------------------------------------------------------------------------------------------------
    Bradi1g69660.1_BRADI ------LWCPLHPGMCNLSQ----------------------------------------------------------------------------------------------------
    GSMUA_Achr11T11280_0 ------------------------------------------------------------------------------------------------------------------------
    Os03g11980.1_ORYSA   ------LWCSLHPGMCNLSQ----------------------------------------------------------------------------------------------------
    GSVIVP00007781001_VI ------------------------------------------------------------------------------------------------------------------------
    Selmo_117332_SELMO   -KEEGSSKPPDSPHSTL-------------------------------------------------------------------------------------------------------
    Glyma08g17200.1_GLYM ------LWCVRNPGMCNTVQ----------------------------------------------------------------------------------------------------
    supercontig_88.31_CA ------------------------------------------------------------------------------------------------------------------------
    Selmo_429308_SELMO   -KEEGSSKPPDSPHSTL-------------------------------------------------------------------------------------------------------
    GRMZM2G121514_P01_ZE ----YGRSAPSEPGSC--------------------------------------------------------------------------------------------------------
    Selmo_441789_SELMO   ------RWCILNHGLCNINI----------------------------------------------------------------------------------------------------
    Os05g32410.1_ORYSA   ----SLIWATIGSPI---------------------------------------------------------------------------------------------------------
    28180.m000377_RICCO  ---FYARRPPTGPGSC--------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1690      1700      1710
                         =========+=========+=========+=========
    PDK_30s1119031g009_P ---------------------------------------
    Cucsa.165600.1_CUCSA -----------------------------------YDQ-
    Cre22.g762950.t1.1_C ---------------------------------------
    Bradi2g37460.1_BRADI -----------------------------------FIQ-
    Glyma02g10570.1_GLYM -----------------------------------YDQ-
    Selmo_422155_SELMO   ---------------------------------------
    47890.m000013_RICCO  ---------------------------------------
    Glyma15g41990.1_GLYM ---------------------------------------
    GSVIVP00009338001_VI ---------------------------------------
    GSVIVP00008023001_VI ---------------------------------------
    cassava4.1_033064m_M -----------------------------------YSQ-
    supercontig_197.23_C ---------------------------------------
    MDP0000129369_MALDO  ---------------------------------------
    GSMUA_Achr11T11230_0 ---------------------------------------
    GSVIVP00003707001_VI ---------------------------------------
    Sb01g042640.1_SORBI  ---------------------------------------
    GSMUA_Achr5T28320_00 -----------------------------------FLQ-
    At1g65590.1_ARATH    -----------------------------------LAQ-
    Selmo_445016_SELMO   -----------------------------------YDQ-
    Selmo_429325_SELMO   TASNHEIVRPQAASPKSGSMIGKMNLKANCFKRLVLNQP
    Tc05_g015670_THECC   -----------------------------------YVNP
    cassava4.1_021615m_M -----------------------------------YVQ-
    supercontig_88.30_CA ---------------------------------------
    29929.m004503_RICCO  -----------------------------------YLQ-
    Selmo_422260_SELMO   ---------------------------------------
    Bradi2g57420.1_BRADI -----------------------------------VRQ-
    GRMZM2G117405_P01_ZE ---------------------------------------
    Medtr2g062560.1_MEDT ---------------------------------------
    Os07g38790.1_ORYSA   ---------------------------------------
    Glyma10g43710.1_GLYM -----------------------------------FEQ-
    Glyma08g16970.1_GLYM ---------------------------------------
    Sb09g001670.1_SORBI  -----------------------------------FVQ-
    Os05g02510.1_ORYSA   -----------------------------------FIQ-
    Bradi3g44610.1_BRADI -----------------------------------LYA-
    GSMUA_Achr11T11360_0 ---------------------------------------
    GSVIVP00010037001_VI ---------------------------------------
    34575.m000024_RICCO  ---------------------------------------
    Phypa_128384_PHYPA   -----------------------------------FKQ-
    POPTR_0009s03010.1_P ---------------------------------------
    MDP0000564236_MALDO  ---------------------------------------
    GRMZM5G860235_P01_ZE ---------------------------------------
    At1g05590.1_ARATH    ---------------------------------------
    GSMUA_Achr11T11370_0 -----------------------------------YKQ-
    supercontig_1696.1_C ---------------------------------------
    PDK_30s699271g002_PH -----------------------------------FAQ-
    PDK_30s998691g002_PH ---------------------------------------
    At3g55260.1_ARATH    -----------------------------------YAQ-
    MDP0000798095_MALDO  -----------------------------------YDQ-
    Glyma18g52290.1_GLYM -----------------------------------YEQ-
    GSMUA_AchrUn_randomT ---------------------------------------
    Cucsa.177460.1_CUCSA ---------------------------------------
    GSVIVP00009337001_VI ---------------------------------------
    POPTR_0008s07890.1_P -----------------------------------YGQ-
    Glyma20g38400.1_GLYM -----------------------------------FEQ-
    PDK_30s883821g041_PH ---------------------------------------
    cassava4.1_033827m_M ---------------------------------------
    Tc05_g024510_THECC   ---------------------------------------
    cassava4.1_007813m_M ---------------------------------------
    Bradi1g23740.1_BRADI ---------------------------------------
    Cucsa.178740.1_CUCSA -----------------------------------FVQ-
    28180.m000376_RICCO  ---------------------------------------
    Selmo_422160_SELMO   ---------------------------------------
    Os05g34320.1_ORYSA   -----------------------------------IKQ-
    GSVIVP00009334001_VI -----------------------------------YKQ-
    GSMUA_Achr2T07820_00 ---------------------------------------
    Sb02g037280.1_SORBI  ---------------------------------------
    Selmo_422139_SELMO   ---------------------------------------
    POPTR_0001s23930.1_P ---------------------------------------
    GRMZM2G034598_P01_ZE -----------------------------------FVQ-
    cassava4.1_023099m_M ---------------------------------------
    29616.m000216_RICCO  ---------------------------------------
    cassava4.1_004406m_M ---------------------------------------
    GRMZM2G134251_P01_ZE ---------------------------------------
    POPTR_0010s21790.1_P -----------------------------------YEQ-
    Bradi2g25310.1_BRADI -----------------------------------IRQ-
    Sb09g020420.1_SORBI  -----------------------------------LRQ-
    Phypa_90762_PHYPA    ---------------------------------------
    POPTR_0001s23910.1_P ---------------------------------------
    supercontig_88.33_CA ---------------------------------------
    GSVIVP00029535001_VI -----------------------------------YEQ-
    POPTR_0008s04960.1_P ---------------------------------------
    Os01g66700.1_ORYSA   -----------------------------------VRQ-
    Tc00_g000370_THECC   -----------------------------------YEQ-
    Bradi1g69660.1_BRADI ---------------------------------------
    GSMUA_Achr11T11280_0 ---------------------------------------
    Os03g11980.1_ORYSA   ---------------------------------------
    GSVIVP00007781001_VI ---------------------------------------
    Selmo_117332_SELMO   ---------------------------------------
    Glyma08g17200.1_GLYM ---------------------------------------
    supercontig_88.31_CA ---------------------------------------
    Selmo_429308_SELMO   ---------------------------------------
    GRMZM2G121514_P01_ZE -----------------------------------LRQ-
    Selmo_441789_SELMO   ---------------------------------------
    Os05g32410.1_ORYSA   ---------------------------------------
    28180.m000377_RICCO  -----------------------------------YEQ-

    Selected Cols:                                              

    Gaps Scores: