Selected Sequences:    56 /Selected Residues:     400
    Deleted Sequences:      0 /Deleted Residues:     1409

    Gaps Scores:           =0=   <.001  <.050  <.100  <.150  <.200  <.250  <.350  <.500  <.750  <1.00   =1=  

                                 10        20        30        40        50        60        70        80        90       100       110       120
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 MAS---------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 MAS---------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 -MA---------------------------------------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT MAA---------------------------------------------------------------------------------------------------------------------
    Potri.006G114000.1_P -MA---------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M -MA---------------------------------------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  -MA---------------------------------------------------------------------------------------------------------------------
    PDK_30s914801g004_PH MVV---------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI -M----------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P -MA---------------------------------------------------------------------------------------------------------------------
    cassava4.1_007842m_M -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g025609m_CI -MA---------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m MAA---------------------------------------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  -MA---------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 MI----------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C -MT---------------------------------------------------------------------------------------------------------------------
    selmo_154057_SELMO   -MA---------------------------------------------------------------------------------------------------------------------
    MDP0000119861_MALDO  -MA---------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       --M---------------------------------------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g030723m_CI -M----------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI --M---------------------------------------------------------------------------------------------------------------------
    MDP0000134594_MALDO  -MA---------------------------------------------------------------------------------------------------------------------
    Ca_18921_CICAR       -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB -MP---------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI -MA---------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  MAA---------------------------------------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    -MA---------------------------------------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   --M---------------------------------------------------------------------------------------------------------------------
    PDK_30s661041g004_PH -MA---------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     -MA---------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH -MELVLKKYFGYSQFRPYQKEIILKILDGQDCLVVIALDRNSYQSQMESCYQVPPLVRGKTAIVISPLLSLMQDQVMSLKQRGIKADYLGSTQINRAVQSEAESGSFDVLYMTPEKACLL
    MDP0000320218_MALDO  -MA---------------------------------------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM -MA---------------------------------------------------------------------------------------------------------------------
    GSVIVT01029830001_VI -MA---------------------------------------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  -MA---------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G -MA---------------------------------------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI -M----------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  -MA---------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE -MA---------------------------------------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g025201m_CI -MA---------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P -MA---------------------------------------------------------------------------------------------------------------------
    30073.m002202_RICCO  -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g028422m_CI -MA---------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI -M----------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   -MA---------------------------------------------------------------------------------------------------------------------
    Potri.T137900.1_POPT -M----------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      -MA---------------------------------------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM -MA---------------------------------------------------------------------------------------------------------------------
    EG4P12564_ELAGV      -MA---------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA -MA---------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                130       140       150       160       170       180       190       200       210       220       230       240
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 ------------------------------------------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M ------------------------------------------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007842m_M ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m ------------------------------------------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C ------------------------------------------------------------------------------------------------------------------------
    selmo_154057_SELMO   ------------------------------------------------------------------------------------------------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       ------------------------------------------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    MDP0000134594_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Ca_18921_CICAR       ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  ------------------------------------------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    ------------------------------------------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH PSRFWIKLLSVGICLLAVDEAHCISEWGHDFRSLHLYALAVKSLSDPVTLVYGINSLCNFISESVGIRKEYKQLYTLRGLLPSVPFVALTATATEKVRNDIICSLNMNDPYIAIGSFDRQ
    MDP0000320218_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029830001_VI ------------------------------------------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ------------------------------------------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P ------------------------------------------------------------------------------------------------------------------------
    30073.m002202_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------------------------------------------------------------------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                250       260       270       280       290       300       310       320       330       340       350       360
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 ------------------------------------------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M ------------------------------------------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007842m_M ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m ------------------------------------------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C ---------------------------------------------------------------------------------------------------------------------GTS
    selmo_154057_SELMO   ------------------------------------------------------------------------------------------------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       ------------------------------------------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    MDP0000134594_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Ca_18921_CICAR       ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  ------------------------------------------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    ------------------------------------------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH NLFYGAKSFSRSQSFLDELVTEVSKYSANAGSTIIYCTTVKDAEQICESLRNAGIKSGIYHGQMSSKAREESHRSLLEGSECFQMSAIVGLLYALLSFIRDELQVMVATVAFGMGIDKPN
    MDP0000320218_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029830001_VI ------------------------------------------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ------------------------------------------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P ------------------------------------------------------------------------------------------------------------------------
    30073.m002202_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------------------------------------------------------------------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                370       380       390       400       410       420       430       440       450       460       470       480
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 -----SAEGLVPITRAFLARYYDTCPLP-PLSEDVS------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 -----SAEGLVPITRAFLARYYDTCPLP-PLSEDVS------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 -----TTEGLVPITRAYLARYYDKYPLP-PLPDAAT------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT -----STEGLVPITRAFLSSYYDKHPFTPPLSSDVS------------------------------------------------------------------------------------
    Potri.006G114000.1_P -----STEGLVPITRKFLASYDDKYPFA-PLPDDVS------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M -----STEGLVPITRQFLASYYDKYPFA-PLSDDVS------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  -----STEGLVPITRAFLASYYDKHPFT-PLSADVS------------------------------------------------------------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P -----STEGLVPITRIFLASYYDKYPFT-PLPDDVS------------------------------------------------------------------------------------
    cassava4.1_007842m_M -----STDGLVPITRQFLASYYDKHPFP-PLSDDVS------------------------------------------------------------------------------------
    orange1.1g025609m_CI -----STEGLVPITRNFLASYYDKYPAP-PLSDDVS------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m -----STEGLVPITRAFLASYYDNHPFT-PLSPNVD------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  -----TTEGLVPITRTYLARYYDNYPLP-PLPDATT------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C HAAKKKQQHLVPITREFLREFYRQYPLE-PVPGAVR------------------------------------------------------------------------------------
    selmo_154057_SELMO   -----STEGLVPITRDFLSRFYDRYPFE-ALAPGIA------------------------------------------------------------------------------------
    MDP0000119861_MALDO  -----STEGIVPITRAFLASYYDTYQFP-PLSNDVA------------------------------------------------------------------------------------
    AK361991_HORVU       -----TTEGLVPITRDYLARYYDKYPLP-PIPDGVT------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    -----STEGLMPITRAFLASYYDKYPFS-PLSDDVS------------------------------------------------------------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI -----ATEGLVPITRDYLARYYDKYPLP-PLPDGVT------------------------------------------------------------------------------------
    MDP0000134594_MALDO  -----STEGIVPITRAFLASYYDTYQFP-XLSNDVA------------------------------------------------------------------------------------
    Ca_18921_CICAR       -----STEGLVPITRAFLASYYDKHPFT-PLSHDVS------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI -----STEGLVPITRNFLASYYDKYPAP-PLSDDVS------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  -----STAGLVPINRAFLAKFYDKYPFA-PLAPEVE------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    -----STEGLVPITRSFLASYYDKYMFP-PLSDDVS------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   -----ATEGLVPITRAYLARYYDKYPLP-PLPDAAT------------------------------------------------------------------------------------
    PDK_30s661041g004_PH -----LAEGLVPITRAFLARYYDKCPLP-PLSDDVP------------------------------------------------------------------------------------
    EG4P152087_ELAGV     -----STEGLVPITRAFLARYYDKYPLP-RLSDDIP------------------------------------------------------------------------------------
    PDK_30s772521g001_PH ISFCLSVQGFELQSRKILDNNFDKLPLH-GLGKDYSATWWKALAALLLADDYLKDNIQDSYRLVSVSLRGLQFLRSASTVHQTPLVLALTSEMIDEEEHGGPQSKVGDLQNLATLESEGF
    MDP0000320218_MALDO  -----STEGIVPITRAFLASYYDTYQFP-PLSNDVA------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM -----STEGLVPITRAFLASYYDKHPFT-PLSAHVS------------------------------------------------------------------------------------
    GSVIVT01029830001_VI -----STEGLVPITRNFLASFYDKYPFQ-SLSDDVS------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  -----STEGLVPITRSYLAKFYDKYSFA-PVSEDVT------------------------------------------------------------------------------------
    Gorai.005G001100.1_G -----STGGLVPITRAFLASYYEKYPFD-PLPDDVS------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  -----STEGIVPITRAFLASYYDTYQFP-PLSNDVA------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE -----MTEGLVPITRTYLARYYDKYPLP-PLPDATT------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S -----STEGLMPITRAFLSSYYDKYPFS-PLSQDVS------------------------------------------------------------------------------------
    orange1.1g025201m_CI -----STEGLVPITRNFLASYYDKYPAP-PLSDDVS------------------------------------------------------------------------------------
    Phvul.010G060400.1_P -----STEGLVPITRAFLASYYDKHPFT-PLSADVT------------------------------------------------------------------------------------
    30073.m002202_RICCO  -----STEGLMPITRQFLASYYDKYPFQ-PLSDDVS------------------------------------------------------------------------------------
    orange1.1g028422m_CI -----STEGLVPITRNFLASYYDKYPAP-PLSDDVS------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   -----STEGLVPITRTFLASYYDKYPFD-PLSDDVS------------------------------------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      -----STEGLVPITRDFLARYYDKYPLP-PLADDVP------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM -----STEGLVPITRAFLASYYDKHPFT-PLSAHVS------------------------------------------------------------------------------------
    EG4P12564_ELAGV      -----STEGLVPITRAFLARYYDKYPLP-RLSDDIP------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA -----SMEGLVPITRHFLASYYDKYPFT-PLSDHVS------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                490       500       510       520       530       540       550       560       570       580       590       600
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 ------------------------------------------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M ------------------------------------------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007842m_M ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m ------------------------------------------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C ------------------------------------------------------------------------------------------------------------------------
    selmo_154057_SELMO   ------------------------------------------------------------------------------------------------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       ------------------------------------------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    MDP0000134594_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Ca_18921_CICAR       ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  ------------------------------------------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    ------------------------------------------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH SEDVLVADFTYISTVLSINNDLAEAKFYHRLLDIRMKLARDDGTAPYAICGDQAIKKIAKIRPSTKARFANIDGVNQHLVKKYGDSFLQNISHLSQELNLSLDEGTVLTATAECPNSRRR
    MDP0000320218_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029830001_VI ------------------------------------------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ------------------------------------------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P ------------------------------------------------------------------------------------------------------------------------
    30073.m002202_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------------------------------------------------------------------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                610       620       630       640       650       660       670       680       690       700       710       720
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------------------------------------------------------------------------RLTAELREL---------------------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------RLTAQLREL---------------------------------
    Millet_GLEAN_1002488 ------------------------------------------------------------------------------DLAARLRAL---------------------------------
    Medtr8g005040.1_MEDT ------------------------------------------------------------------------------HLTSLLRTM---------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------RLSSEIRSI---------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M ------------------------------------------------------------------------------RLSSEIRSL---------------------------------
    C.cajan_16359_CAJCA  ------------------------------------------------------------------------------RLSSQIRSM---------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P ------------------------------------------------------------------------------RLSSEIRSM---------------------------------
    cassava4.1_007842m_M ------------------------------------------------------------------------------RLSSEIRSW---------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------RLSSQIRSL---------------------------------
    chr3.CM0634.420.r2.m ------------------------------------------------------------------------------TLSSRLRSI---------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------DLAARLRAL---------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C --------------------------------------------------------------------------------DSHVKAI---------------------------------
    selmo_154057_SELMO   ------------------------------------------------------------------------------AADSQLREE---------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------RLSSEIRSF---------------------------------
    AK361991_HORVU       ------------------------------------------------------------------------------ALAARLRAL---------------------------------
    AT5G01010.2_ARATH    ------------------------------------------------------------------------------RLSSDMASL---------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI ------------------------------------------------------------------------------TLAARLRDM---------------------------------
    MDP0000134594_MALDO  ------------------------------------------------------------------------------RLSSEIRSF---------------------------------
    Ca_18921_CICAR       ------------------------------------------------------------------------------RLTTELRSM---------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------RLSSQIRSL---------------------------------
    Pp1s77_45V6.1_PHYPA  ------------------------------------------------------------------------------TLLALLREH---------------------------------
    Cc06_g00030_COFCA    ------------------------------------------------------------------------------RLSAEIRSL---------------------------------
    Os05g24020.1_ORYSA   ------------------------------------------------------------------------------ALADRLRAI---------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------RLTAELRGF---------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------RLTAELRGF---------------------------------
    PDK_30s772521g001_PH LAAVTVKEYPNSQKNLAPAKFGAWQMWQAGLSLQKIANSPGKSAPIKVQTVVGYILEAARERFEINWTRFCEEIGLTPEIISQIRSAITKIGSRDRLKPIKEELPENLPDLFTHEIKRRS
    MDP0000320218_MALDO  ------------------------------------------------------------------------------RLSAEIRSX---------------------------------
    Glyma03g00280.1_GLYM ------------------------------------------------------------------------------TLSSQIRSM---------------------------------
    GSVIVT01029830001_VI ------------------------------------------------------------------------------RLSYQIRSM---------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------RLSNELRKC---------------------------------
    Gorai.005G001100.1_G ------------------------------------------------------------------------------RLSSQIRSF---------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------RLSAEIRSX---------------------------------
    GRMZM2G424783_P02_ZE ------------------------------------------------------------------------------DLAARLRAL---------------------------------
    Solyc10g074690.1.1_S ------------------------------------------------------------------------------RLTDEIHSM---------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------RLSSQIRSL---------------------------------
    Phvul.010G060400.1_P ------------------------------------------------------------------------------RLSSQIRSL---------------------------------
    30073.m002202_RICCO  ------------------------------------------------------------------------------RLTSEIRSI---------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------RLSSQIRSL---------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------------------------------------------------------------------------RLSFEIRSF---------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ------------------------------------------------------------------------------RFTAELRGF---------------------------------
    Glyma16g34850.1_GLYM ------------------------------------------------------------------------------TLSSQIRSM---------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------RLTAELRGF---------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------RLSTEMLAL---------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                730       740       750       760       770       780       790       800       810       820       830       840
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------------------------------------------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------------------------------------------------
    Millet_GLEAN_1002488 ------------------------------------------------------------------------------------------------------------------------
    Medtr8g005040.1_MEDT ------------------------------------------------------------------------------------------------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M ------------------------------------------------------------------------------------------------------------------------
    C.cajan_16359_CAJCA  ------------------------------------------------------------------------------------------------------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007842m_M ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m ------------------------------------------------------------------------------------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C ------------------------------------------------------------------------------------------------------------------------
    selmo_154057_SELMO   ------------------------------------------------------------------------------------------------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       ------------------------------------------------------------------------------------------------------------------------
    AT5G01010.2_ARATH    ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI ------------------------------------------------------------------------------------------------------------------------
    MDP0000134594_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Ca_18921_CICAR       ------------------------------------------------------------------------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  ------------------------------------------------------------------------------------------------------------------------
    Cc06_g00030_COFCA    ------------------------------------------------------------------------------------------------------------------------
    Os05g24020.1_ORYSA   ------------------------------------------------------------------------------------------------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH LTKEQLKIPPPDPSRKTEVSYEHIKTLLTMEDLGGSAEDITGEISTMVPESPSSCDVAKSEVKSSVHEACIRKKASFHSLESMTDPISACKRMENPLHFESFAKKLHTFHGQEEKQNDDL
    MDP0000320218_MALDO  ------------------------------------------------------------------------------------------------------------------------
    Glyma03g00280.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    GSVIVT01029830001_VI ------------------------------------------------------------------------------------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ------------------------------------------------------------------------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ------------------------------------------------------------------------------------------------------------------------
    Solyc10g074690.1.1_S ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P ------------------------------------------------------------------------------------------------------------------------
    30073.m002202_RICCO  ------------------------------------------------------------------------------------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------------------------------------------------------------------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Glyma16g34850.1_GLYM ------------------------------------------------------------------------------------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                850       860       870       880       890       900       910       920       930       940       950       960
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ----------------------------SD--GLARESPLTS----GEE-LLVHEVDHQPAHKIDENLWKNRENIEEILVLLEESHRPRL---LQ-EKAIPEYVDIAATLGELEVKLRST
    ITC1587_Bchr3_P06037 ----------------------------SD--GLARESPLTS----GEE-LLVHEVDCQPAHKIDENLWKNRENIEEILFLLEESHRPRSE--LQ-EKAIPEHVDIAATLGELEVKLRIT
    Millet_GLEAN_1002488 ----------------------------SA--DLAAVAPITP----DEE-LLKQEAAGIPAHKIDENMWKNREQMEEILFLLNTSRRPVA---LQ-QKSTPEDTEIVSKLDDIEAKLKDM
    Medtr8g005040.1_MEDT ----------------------------AT--DLGID---------DEA-LTF----TQPPHKIDENMWKNREYIEETIFLLQQSNWPDP---LKQQQSTPDNIQFSIILGKLKDKLHRT
    Potri.006G114000.1_P ----------------------------IT--DLLL------------------------------------------------------------------------------------
    supercontig_1919.1_C ---------------------------------------------------------------------------------------------LQ-QPSTPDDSDFAISLEKFRDKFQQT
    cassava4.1_007896m_M ----------------------------AS--GLLKDFPPSQ----VER-LLVEEADRQPVHKIDENMWKNREHMEEILFLLDHSRWPSA---LR-QPSTPEDSELATDLSNIRDKFHKT
    C.cajan_16359_CAJCA  ----------------------------AT--DLLNHRPPIQ----GES-DLINEAAQQPPHKIDENMWKNREYIEETIYLLESSNWPEE---LK-QQSAPDSAEFAITLGQLKDKLHHT
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ---------------------------------------------------------------------------------------------LK-------------------------
    Potri.016G143700.1_P ----------------------------TS--DLLKDSPPSS---QDES-LLLKESEGESPHKIDENMWKNREHMEEIIFLLHESRCPQP---LQ------DDSELSTVFNNIRYKFQKT
    cassava4.1_007842m_M ----------------------------AS--DLLKDFPPSQ----GEK-LLVEGADRQPVHKIDENMWKNREHMEEILFLLDHSRWPLA---LR-RPSTPEESELAAAFNSIRGKFQKA
    orange1.1g025609m_CI ----------------------------AN--DLLLDSPPSQ----EES-LLIEEADRQPPHKIDENMWKNREHMEEIIFLLKRSHWPAT-------SSAPEDVELANVLGKLSEKFEKT
    chr3.CM0634.420.r2.m ----------------------------AD--HLLSQFPPNQ----GES-NLINKADAQPPHKIDENMWRNREYIEETIFLLERSNWPEA---LK-QQSTPDNVELATMLEQLKHKLHNT
    Sb09g012090.1_SORBI  ----------------------------SA--DLAAVAPITP----DEE-LLEQEAAGIPAHKIDENLWKNREQMEEILFLINTSRRPVA---LQ-QKSTPEDAQIVCTLDDIEAKLKDM
    GSMUA_Achr3P09600_00 ----------------------------------------------------------------------------EIQF----------------------------------------
    Cre02.g117950.t1.1_C --------------------------------EELERVVTKP----GSK--VPQEFYMETPTRIDDCFWRSRMICEEL--ALSVSRIKQG---LA-PAGGPAAVEVAAVCDRMQALLVQA
    selmo_154057_SELMO   ----------------------------NE--RMSKHYAEES----GND--LILDLSFDSPHKIDENLWKNREQVEEILYLLEKRHWPSS---LN-GPQMPD------KLYKLALELQSL
    MDP0000119861_MALDO  ----------------------------TA--DLLHHSPAAQ----GEERLLVSELESEPPHKVDENMWKNREHMEEILFLLEXPHWPQT---LR-EQSSPDDAELATVIDRLRQKFQTS
    AK361991_HORVU       ----------------------------ST--DLAAAFPFSP----DEE-HLEQEASGVPAHKIDENMWKNREQMEEILFLLNKSRRPIA---LQ-QKSTQEDAEIVSTLDNCETKLKEM
    AT5G01010.2_ARATH    ----------------------------IK--LLTVQSPPSQ----GET-SLIDEANRQPPHKIDENMWKNREQMEEILFLLSPSRWPVQ---LR-EPSTSEDAEFASILRTLKDSFDNA
    orange1.1g030723m_CI ---------------------------------------------------------------------------------------------LK-------------------------
    Bradi2g30810.1_BRADI ----------------------------SA--DLAAVAPMSP----DEE-LLGREAGGIPAHKIDENMWKNREQMEEILFLLNKSRRPNP---LQ-QKSTPEDDEIACKLDVVETKIKDM
    MDP0000134594_MALDO  ----------------------------TA--DLLHHSPAAQ----GEERLLVSELESEPPHKVDENMWKNREHMEEILFLLEKPHWPQT---LR-EQSSPDDAELATVIDRLRQKFQTS
    Ca_18921_CICAR       ----------------------------AS--DLLAQHPPTQ----GEI-RLINEADSQPPHKIDENMWKNREYIEETIFLLEGFNWPEA---LK-QQSTPENVAFSIMLGKLKDKLRHT
    orange1.1g030253m_CI -------------------------------------------------------------------MWKNREHMEEIIFLLKRSHWPAT---LQ-QSSAPEDVELANVLGKLSEKFEKT
    MA_949559g0010_PICAB ----------------------------QD---------------------------------------------------------------FR-------------------------
    orange1.1g025408m_CI ----------------------------AN--DLLLDSPPSQ----EES-LLIEEADRQPPHKIDENMWKNREHMEEIIFLLKRSHWPAT---LQ-QSSAPEDVELANVLGKLSEKFEKT
    Pp1s77_45V6.1_PHYPA  ----------------------------VH--KAQTVSPGSR----DNG-ALIGQFNNPAPHKLDENLWKNREMIEEMLHLLSKRKWPSS---LK-GNVSSELEPVAERIKKMEVGLQQL
    Cc06_g00030_COFCA    ----------------------------SG--DLLKDSPPSQ----GET-LLIRESEKQPPHKIDENLWKNREQIEEIIFLLETSNWPTS---LQ-QQLTGEHTELVSLLSRLKEKFESI
    Os05g24020.1_ORYSA   ----------------------------SAALALAAAAPITP----DEE-LLEKEANGIPAHKIDENLWKNREQMEEILLLLNKSRRPVA---LQ-QRSTAEDTETFIILDDVETKLKDM
    PDK_30s661041g004_PH ----------------------------VD--GLLRELAPTF----GEE-LVVNEANREPPHKIDENLWKNREHIEEILFLLEDSHRPRS---LQ-EKATPEDMDIAAVFGDIEAKFKTS
    EG4P152087_ELAGV     ----------------------------AD--GLLREHAPTS----GEE-LVVNEADCEPPHKIDENLWKNREHIEEILFLLDDSHRPRS---VV-------------------CKF---
    PDK_30s772521g001_PH EVTESAALEWVRNQDGVSLSDVIEHFKGSNKDTVVRLLAYLE----GEE-LEVNEAGREPPQKIDENLWKNREHIEEILFLLEESHQPRL---LQ-EKATPEYIDIAAVFGDIEAKLKTT
    MDP0000320218_MALDO  ----------------------------TA--DLLRHSPAAQ----GEERLLVSELETEPPHKVDENMWKNREHMEEILFLLEKPHWPQT---LR-MQXSPDDAELATVIDRLHQKFQTS
    Glyma03g00280.1_GLYM ----------------------------AN--DFLTQHPPIQVLLLGER-ILINEADQQPPHKMDENMWKNREYIEETIFLLQSSNWPEA---LK-QQSAADCVEFSITLGKLKDKLHNT
    GSVIVT01029830001_VI ----------------------------AS--DLHNDSPLTP----GET-LLVKEADCPPPHKIDENMWKNREQIEEILFLLERSHWPPL---LQ-RQSTPEDAELGLILGHLKDKFQNT
    MA_48204g0010_PICAB  ----------------------------YR--SFLSELPDRP----GFR-SILN--------------------ISIIFFSLCV---------FR-------------------------
    Gorai.005G001100.1_G ----------------------------IQ--DLIQGFPPTQ----GES-LLIQEADSEPPHKMDENMWKNREHIEEILFLLERPHWPSV---LQ-QSSTAEVAEFATTLGQLKDKFQAT
    MA_702204g0010_PICAB -----------------------------------------------EE-LLVSEMEWTPPHKIDENLWRNREQIEEILFLLDKGNWPMK---LK-AHATSADTAIATAVERFDAEMHSI
    orange1.1g033639m_CI ---------------------------------------------------------------------------------------------LK-------------------------
    MDP0000266721_MALDO  ----------------------------TA--DLLRHSPAAQ----GEERLLVSELETEPPHKVDENMWKNREHMEEILFLLEKPHWPQT---LR-MQXSPDDAELATVIDRLHQKFQTS
    GRMZM2G424783_P02_ZE ----------------------------SA--DLAAVAPIAP----DEE-LLEQEAAGIPAHKIDENLWKNREQMEEILFLINTSHRPVA---LQ-QKSTPEDAEIVCTLDDIEAKLKDM
    Solyc10g074690.1.1_S ----------------------------AK--NLQKDAPLTE----GES-SLVLEAESHPPHKVDENLWKNREQLEEILFLLESSNWPPA---LQ-LQSTTEDVELVSVLERLGEKFRST
    orange1.1g025201m_CI ----------------------------AN--DLLLDSPPSQ----EES-LLIEEADRQPPHKIDENMWKNREHMEEIIFLLKRSHWPATVRYLQ-QSSAPEDVELANVLGKLSEKFEKT
    Phvul.010G060400.1_P ----------------------------AN--DFLTQHPPTQ----GEA-VLIEEADRLPPHKIDENMWKNREYIEETIFLLESSNWPEV---LK-QQSAPDSVEFALTFGQLKDKLYNA
    30073.m002202_RICCO  ----------------------------AS--DLLKDSPPSK----DER-LLVEEAERDPIHKIDENMWKNRELMEEILFLLDHSRWPSA---LR-QPSTPEDSELATAIAKVRDFFRKT
    orange1.1g028422m_CI ----------------------------AN--DLLLDSPPSQ----EES-LLIEEADRQPPHKIDENMWKNREHMEEIIFLLKRSHWPAT---LQ-QSSAPEDVELANVLGKLSEKFEKT
    orange1.1g033790m_CI ---------------------------------------------------------------------------------------------LK-------------------------
    Cucsa.279720.1_CUCSA ---------------------------------------------------------------------------------------------MK-------------------------
    Tc00_g080870_THECC   ----------------------------AQ--DLLQGLPPTQ----GES-LLIQEADSQPPHKIDENMWKNREHIEEILFLLERSHWPPL---LQ-QPSTSEVAEFATICGRLKDKFQRI
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ----------------------------SD--SLLREFPLTS----GEE-LVVNEVDREPPRKIDENLWKNREHIEEILFLLEDSYQPRL---VV-------------------CKF---
    Glyma16g34850.1_GLYM ----------------------------AN--DFLTQHPPIQ----GES-ILINEADQQPPHKMDENMWKNREYIEETIFLLQSSNWPEA---LK-QQSTADSVEFAITLGKLKDKLHIT
    EG4P12564_ELAGV      ----------------------------AD--GLLREHAPTS----GEE-LVVNEADCEPPHKIDENLWKNREHIEEILFLLDDSHRPRS---LQ-EKATPEDIDLAAVFGDIEAKFKTS
    Cucsa.279710.1_CUCSA ----------------------------AN--SLLDELPPTS----EES-TLLDEANQHPPHKIDENMWKNRENVEEILFLFEKSRWPQE---VQ-KESATGESELANIIGKLEEKARNA

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                                970       980       990      1000      1010      1020      1030      1040      1050      1060      1070      1080
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 LKTLEAFQQTNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSERNRQAEVDALVN-------
    ITC1587_Bchr3_P06037 LKTLEAFQQTNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSERNRQAEVDALVN-------
    Millet_GLEAN_1002488 LKKLEQFQLKNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALAS-------
    Medtr8g005040.1_MEDT LTTLESFQIKNADHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLLRQQRERSERNKQAEVDALVY-------
    Potri.006G114000.1_P --------------------------ISGFL-----------------------------------------------------------------------------------------
    supercontig_1919.1_C LKALVAFQSKNSERVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDSLVN-------
    cassava4.1_007896m_M LKTLESFQVKNSERIFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSEKNKQAEVDALVN-------
    C.cajan_16359_CAJCA  LKALESFQIKNAEHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLLRQQRERSERNKQAEVDTLIN-------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P LNVLQDFQAVNSDHVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALVN-------
    cassava4.1_007842m_M LKTLESFQVQNSERVFNI--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSEKNKQAEVDALVN-------
    orange1.1g025609m_CI LNTLKSFQAVNSDRIFNT--------VMTYM-----------------------------------------------------PQDFRGALIRQQRERSERNKQAEVDALVN-------
    chr3.CM0634.420.r2.m LKSLESFQIKNAEHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLLRQQRERSERNKQAEVEALIN-------
    Sb09g012090.1_SORBI  LKKLEQFQLENADSVFNT--------VMTYS-----------------------------------------------------PKIFE-------------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C ERDVWTVQETNTASVRQQ--------LKQFI-----------------------------------------------------PQDFRGALLERQRVAGEAKYKKQIDDLVK-------
    selmo_154057_SELMO   LKFIEDYQYFSSEKIFSM--------ILTYM-----------------------------------------------------PQDFRASLIKQQRDRSEKKRQAEVETLLN-------
    MDP0000119861_MALDO  LKTLESFQAKNSERVFNT--------VMTYI-----------------------------------------------------PQDFRGRLIRQQRERSERNKQAEVEALVS-------
    AK361991_HORVU       LKKLEQFQLKNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERSKQAEVDAVVS-------
    AT5G01010.2_ARATH    FTAMISFQTKNSERIFST--------VMTYM-----------------------------------------------------PQDFRGTLIRQQKERSERNKQAEVDALVS-------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI LKKLEQFQLTNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALVH-------
    MDP0000134594_MALDO  LKTLESFQAKNSERVFNT--------VMTYI-----------------------------------------------------PQDFRGRLIRQQRERSERNKQAEVEALVS-------
    Ca_18921_CICAR       LRSLESFQIKNAEHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLLRQQRERSERNKQAEVDALVN-------
    orange1.1g030253m_CI LNTLKSFQAVNSDRIFNT--------VMTYM-----------------------------------------------------PQDFRGALIRQQRERSERNKQAEVDALVN-------
    MA_949559g0010_PICAB ----CSLFKQQRERSERR--------KQAEV-----------------------------------------------------DQEFRCSRFKQQRERSERRKQAEVDAVIS-------
    orange1.1g025408m_CI LNTLKSFQAVNSDRIFNT--------VMTYM-----------------------------------------------------PQDFRGALIRQQRERSERNKQAEVDALVN-------
    Pp1s77_45V6.1_PHYPA  LDKLVAFQKVQSERIFSM--------VLTYM-----------------------------------------------------PQDFRLTYLKQYRERSEKKKQAEVDNLMA-------
    Cc06_g00030_COFCA    FKLLEHFQSRNSEFVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEIEALVN-------
    Os05g24020.1_ORYSA   LKKLEQFQIKNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALVN-------
    PDK_30s661041g004_PH LKTLEAFQLRNADNIFST--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSEKNRQAEIDALVN-------
    EG4P152087_ELAGV     -----------------A--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSERNRQAEIDALVN-------
    PDK_30s772521g001_PH LKTLETFQLKNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSERNRQAEIDALVN-------
    MDP0000320218_MALDO  LKTLETFQAKNSERVFNT--------VMTYI-----------------------------------------------------PQDFRGRLIRLQRERSERNKQAEVEALVS-------
    Glyma03g00280.1_GLYM LKALESFQTKNAEHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDTLVN-------
    GSVIVT01029830001_VI MKILQAFQSKNSENIFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDVLVN-------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------YQGLRLSSFASSR-----------------------
    Gorai.005G001100.1_G LRILESFQSKNSERVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQKERSERNKQAEVDALIS-------
    MA_702204g0010_PICAB LTAVQFFQSASTEKIFNM---------------------------------------------------------------------------------------GKLSPKCN-------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  LKTLETFQAKNSERVFNT--------VMTYI-----------------------------------------------------PQDFRGRLIRLQRERSERNKQAEVEALVS-------
    GRMZM2G424783_P02_ZE LKNLEQFQLKNADNVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALVS-------
    Solyc10g074690.1.1_S LKSLQTFQSKNSEFVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDALIN-------
    orange1.1g025201m_CI LNTLKSFQAVNSDRIFNT--------VMTYM-----------------------------------------------------PQDFRGALIRQQRERSERNKQAEVDALVN-------
    Phvul.010G060400.1_P LKAVESFQIKNAEHVFYT--------VMTYL-----------------------------------------------------PQDFRGTLLRQQRERSERNKQAEVDTLVN-------
    30073.m002202_RICCO  LKTLEIFQAKNSERVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIRQQKERSEKNKQAEVDALVN-------
    orange1.1g028422m_CI LNTLKSFQAVNSDRIFNT--------VMTYM-----------------------------------------------------PQDFRGALIRQQRERSERNKQAEVDALVN-------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------NNIF-A--------VMTYM-----------------------------------------------------PQDFRGTIIRQQRERSERNKQAEVDALIN-------
    Tc00_g080870_THECC   LRILASFQSRNSERVFNT--------VMTYM-----------------------------------------------------PQDFRGTLIKQQKERSERNKQAEVDALVN-------
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      -----------------A--------VMTYM-----------------------------------------------------PQDFRGSLIRQQRERSERNRQAEIDALVN-------
    Glyma16g34850.1_GLYM LKALESFQTKNAEHVFNT--------VMTYL-----------------------------------------------------PQDFRGTLIRQQRERSERNKQAEVDTLVN-------
    EG4P12564_ELAGV      LKTLETFQLRNADNIFSTDLWKNNDNVMDQLCMALQKWCSLLDCFCFFPGNVLSQENRKVLNTKKPSFLQEKHMREISAQSWLDPTNLYGIILIRHFSKSSRTLENHEGMRLNSYDPHAS
    Cucsa.279710.1_CUCSA LHALVAFQSKNSEHVFNT--------X---------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1090      1100      1110      1120      1130      1140      1150      1160      1170      1180      1190      1200
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 --SGGSIHDRYALLWQQ-QMERRRQLAQLGSASGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    ITC1587_Bchr3_P06037 --SGGSIHDRYALLWQQ-QMERRRQLAQLGSASGVYKTLVKYLVGV-----PQ-------------------------------------------------------------------
    Millet_GLEAN_1002488 --AGGSIRDRYALLWKQ-QMERRVQLAQLGSATGVYKTLVRYLVGVPQFLLPQ------------------------------------------V------------------------
    Medtr8g005040.1_MEDT --SGASIRDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PE------------------------------------------V------------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C --SGGSIRDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PE------------------------------------------V------------------------
    cassava4.1_007896m_M --SGGSIRDRYALLWKQ-QMDRRRQLAQLGCATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    C.cajan_16359_CAJCA  --SGGSIRDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQRSIFSIYFLLFLLGGSLSSNSRDYNIVHNKVSRQLGRMNIKEV------------------------
    PDK_30s914801g004_PH ------------------------------------------------------------------------------------------------------------------------
    orange1.1g031496m_CI ------------------------------------------------------------------------------------------------------------------------
    Potri.016G143700.1_P --SGGSIRDRYALLWRQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    cassava4.1_007842m_M --SGGSIHDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    orange1.1g025609m_CI --SGASIRDRYSLMWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    chr3.CM0634.420.r2.m --SGGSIQDRYALLWKQ-QMDRRRTLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Sb09g012090.1_SORBI  -----------------------------------------------------------------------------------------------V------------------------
    GSMUA_Achr3P09600_00 ------------------------------------------------------------------------------------------------------------------------
    Cre02.g117950.t1.1_C --RGGTIRSRYDLYLQH-QWERRQSLVQLGECSGVYKIVIKLVAGI-----PQ------------------------------------------V------------------------
    selmo_154057_SELMO   --GGGSIQEKYNLLWKQ-QMERRKQLVMLGSASGVYKTLIRFLVGV-----PQ------------------------------------------V------------------------
    MDP0000119861_MALDO  --SGATIRERYALLWNQ-QMERRXLLAQLGSATGVYKTLVKYLVXV-----XQ------------------------------------------V------------------------
    AK361991_HORVU       --AGGSIHDRYALLWKQ-QMDRRVQLAQLGSATGVYKTLVRYLVGV-----PQ------------------------------------------V------------------------
    AT5G01010.2_ARATH    --SGGSIRDTYALLWKQ-QMERRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    orange1.1g030723m_CI ------------------------------------------------------------------------------------------------------------------------
    Bradi2g30810.1_BRADI --AGVSIRDRYKLLWKQ-QMERRVQLAQLGSATGVYKTLVRYLVGV-----PQ------------------------------------------V------------------------
    MDP0000134594_MALDO  --SGATIRERYALLWNQ-QMERRRLLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Ca_18921_CICAR       --SGGSIHDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PE------------------------------------------V------------------------
    orange1.1g030253m_CI --SGASIRDRYSLMWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    MA_949559g0010_PICAB --SGGSIRDKYSLLWKQ-QMERRRQLAQLGSASGVYKTVVKYLVGV-----PE------------------------------------------V------------------------
    orange1.1g025408m_CI --SGASIRDRYSLMWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Pp1s77_45V6.1_PHYPA  --SGGSIHDKYVLLWSQ-QMERRRQLAQLGSATGVFRTLVKYLVGC-----PQ------------------------------------------V------------------------
    Cc06_g00030_COFCA    --SGGTIRDRYALLWKQ-QMERRRLLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Os05g24020.1_ORYSA   --AGGSIRDRYALLWKQ-QMDRRVQLAQLGSATGVYKTLVRYLVGV-----PQ------------------------------------------V------------------------
    PDK_30s661041g004_PH --SGGSIRDRYALLWKQ-QMERRRQLAQLGSAAGVYKALVKYLVGV-----PQ------------------------------------------D------------------------
    EG4P152087_ELAGV     --SGGRIRDRYALLWKQ-QMERK-------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH --SGGSIRDRYALLWKQ-QMERRRQLAQLGSVAGVYKALVKYLVGV-----PQ------------------------------------------V------------------------
    MDP0000320218_MALDO  --SGATIRERYALLWNQ-QMERRRLLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------VCSSRPLLATLLAEFAYYTLCFVWT
    Glyma03g00280.1_GLYM --SGGSIHDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    GSVIVT01029830001_VI --SGGSIQDRYALLWNQ-QMERRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    MA_48204g0010_PICAB  -----------LVIWIMEFLDN--------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G --SGGSIRDRYSLLWKQ-QMDRRRQLVQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  --SGATIRERYALLWNQ-QMERRRLLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------VCSSRPLLATLLAEFAYYTLCFVWT
    GRMZM2G424783_P02_ZE --AGGSIHDRYALLWKQ-QMERRVQLAQLGSATGVYKTLVRYLVGV-----PQ------------------------------------------V------------------------
    Solyc10g074690.1.1_S --SGGSIRDRYALLWNQ-QMERRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    orange1.1g025201m_CI --SGASIRDRYSLMWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Phvul.010G060400.1_P --SGGSICDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    30073.m002202_RICCO  --SGATIRDRYALLWRQ-QMDRRKMLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    orange1.1g028422m_CI --SGASIRDRYSLMWKQ-QMDRLVSLV--------------FFVPV-----VA------------------------------------------W------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA --SGGSIRDRYALLWKQ-QMERRRQLAQLGSATGVYKTLVKYLVGV-----PE-------------------------------------------------------------------
    Tc00_g080870_THECC   --SGGSIHDRYALLWKQ-QMDRRRQLAQLGAATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    Potri.T137900.1_POPT -----------------------------------------YLVA---------------------------------------------------------------------------
    EG4P30120_ELAGV      --SGGSIHDRYALLWKQ-QMERRRQLAQLGSAAGVYKALVKYLVGV-----PQ------------------------------------------M------------------------
    Glyma16g34850.1_GLYM --SGGSIHDRYALLWKQ-QMDRRRQLAQLGSATGVYKTLVKYLVGV-----PQ------------------------------------------V------------------------
    EG4P12564_ELAGV      HRSSGVIHEEGCDAWGSWNLNHRRSLCR--------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1210      1220      1230      1240      1250      1260      1270      1280      1290      1300      1310      1320
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ------------LLDFIRQINDDQGPMEEQRQRYGPSLYSLTKMVLNIRLFLLLTWGRFE----------EKKIQMDQ-ISLMQHAVDLYTHEFEKFIKFIS------------------
    ITC1587_Bchr3_P06037 ------------------------------------------------------------------------------------HAVNLYTHEFEIFIKFIR------------------
    Millet_GLEAN_1002488 ------------LLDFIRQINDDNGPMEEQRERYGPALYTLTKLVLAIRLYLHVSLARYG----------QRKIDKDD-IAVLQHAVIIYTEEFVKFTEFIG------------------
    Medtr8g005040.1_MEDT ------------LLDFTRQINDDDGPMEEQRHRYGPPLYNLTSMILSVRFFLSLSWARYE----------SKKLKGEQ-LAVLEQAVDVYTMEFERFITFLS------------------
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------LLDFIRQINDDDGPMEEQRQRYGPPLYSLTTLVLLIRLFLSLVWGRFE----------ASKLKKDQ-IVILEQAVHVYTSEFERFLIFIS------------------
    cassava4.1_007896m_M ------------LLDFIRTINDDDGPMEEQRQRYGPPLYSLTALVLSIRLFITLSWRRFE----------ASKLNEHQ-VAMLKQAVDVYSHEFERFINFIS------------------
    C.cajan_16359_CAJCA  ------------LLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSIRLFLSLSWTRYD----------AKKLKREQ-IVILEQAVDIYTMELKRFLTFIS------------------
    PDK_30s914801g004_PH ---------------------------------------------------------------------------------------------IEHLILQRN------------------
    orange1.1g031496m_CI -----------------------------------------------------------------------LRRKRHQ-VAILEQAVDVYTSEFESFIKFIS------------------
    Potri.016G143700.1_P ------------LLDFIRQINDDNGPMEEQRQRYGPSLYSLTAMVLLIRLFIQLAWGRFE----------AKKLTRDQ-VAVLEQAVDVYTYEFRRFITFIS------------------
    cassava4.1_007842m_M ------------LLDFIKTINDDDGPMEEQRHRYGPPLYSLTALVLCIRMFISLSWGRFE----------ASKLKGHQ-VAVLKQAVDIYTHEFERFISFIS------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------DILDLFFLGFDLFFGFIR------------------
    chr3.CM0634.420.r2.m ------------LLDFTRQINDDDGPMEEQRHRYGPPLYRLTSMILSIRLFLSLSWARYG----------AKKLEKEQ-MTVLEQAIDVYTSELQRFMTFIS------------------
    Sb09g012090.1_SORBI  ------------L-----------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ---------------------------------------------------------------------------------------------LKVVHYFIR------------------
    Cre02.g117950.t1.1_C ------------LLDFAKEINAKLGPMEEQRIKYGPDLYGITTLGLRLTVCLAAWAEAAGGVGKGGVATPAASAAAPHLAAVVEPAVKFYVEQMLRVIKFIG------------------
    selmo_154057_SELMO   ------------LLDFVQQINDHNGPMEEQRERYGPPLYQLTQLGLHIRIFLTLWWKTFN----------RDTTAQDSRLDLLEESVKLYSSELKRFLTFLR------------------
    MDP0000119861_MALDO  ------------LLDFICQINDDDGK-------------------------------------------------KQE-LAVLEEAVDVYTTEFERFITFIS------------------
    AK361991_HORVU       ------------LLDFIRQINDANGPMEVQRERYGPALYTLTKLVLAVRLYLHLSLARYG----------QKKIEKDD-IAVLQQAVVIYTEEFGKFTTFIG------------------
    AT5G01010.2_ARATH    ------------LLDFIRQINDDDGPMEEQRERYGPPLYSLTKMVIAIRVFLTLLWERYD----------TFKLSKDQ-MNLLSEAAIVYTSEFERFVTFIS------------------
    orange1.1g030723m_CI -----------------------------------------------------------------------LRRKRHQ-VAILEQAVDVYTSEFESFIKFIS------------------
    Bradi2g30810.1_BRADI ------------LLDFIRQINDSNGPMEVQRERYGPALYTLTKLVLAIRLYLHLSLARYG----------QMKIEKDD-LAVLQQAVVIYSEEFGKFTTFIG------------------
    MDP0000134594_MALDO  ------------LLDFICQINDDDGK-------------------------------------------------KXE-LAVLEEAVDVYTTEFERCRVRSL------------------
    Ca_18921_CICAR       ------------LLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSIRFFLSLSWARYW----------AKTLQREQ-LAVLEQAVDVYTMEFERFITFIS------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------DILDLFFLGFDLFFGFIR------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------DILDLFFLGFDLFFGFIR------------------
    Pp1s77_45V6.1_PHYPA  ------------LLEFVCKINDDHGPMEEQRERYGPSLYKLTTFAVALRVFLAVWWSAFD----------CEDISREEMLEVLEQSVEAYKFDFTRYLDFMQ------------------
    Cc06_g00030_COFCA    ------------LLDFIRQINDDQGPMEEQRHRYGPPLYALTTMVLNIRLFLLLLWGHFE----------AQKVQGNQ-ISVLEAAVDVYTSEFERFISFIG------------------
    Os05g24020.1_ORYSA   ------------LLDFIRQINDDNGPMEEQRERYGPALYTLTKLVLAIRLYLHVSLARYG----------QRKIEKDD-IAVLQQAVAIYTEEFEKFTEFIG------------------
    PDK_30s661041g004_PH ------------LLCI--------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH ------------LFDFLRQINDDQGQM-------------------------------------------------DQ-VSVVQQAVHVYNSEFEKFIKVIRTMLVPSFYQAEVPKSDIY
    MDP0000320218_MALDO  XISTAGLFIFMVLLDFIRQINDDDGR------------------------------------------------SKQE-LAVLEEVVDVYTTEFVRFITFI-------------------
    Glyma03g00280.1_GLYM ------------LLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSIRLFLSLSWARYD----------ANKLKMEQ-IAVLEQAVDVYTMELERFLTFIS------------------
    GSVIVT01029830001_VI ------------LLDFIRQLNDDEGPMEEQRQRYGPPLYSLTTLVLSIRLFLFLSWRRFE----------ARKLTKEQ-LTVLGQAVDVYTSEFERFIKFIS------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ------------LLDFIRQINDDDGPMEEQRQRYGPPLYSLTRMVLFIHLFLSLAWQRFE----------AFKLNRLQ-ISVLEEAVDVYTTELQRFINFIS------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI -----------------------------------------------------------------------LRRKRHQ-VAILEQAVDVYTSEFESFIKFIS------------------
    MDP0000266721_MALDO  RISTAX------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ------------LLDFIRQINDDNGPMEEQRERYGPALYTLTKLVLAIRLYLHVSLARYG----------QRKI----------------------------------------------
    Solyc10g074690.1.1_S ------------LLDFVQKINDDDGPMEEQRQRYGPPLYSLTKMVLNIRLFLSLLWRRFE----------AGKLSRSQ-ITVLEEAVDIYTSEFQRFITFIR------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------DILDLFFLGFDLFFGFIR------------------
    Phvul.010G060400.1_P ------------LLDFTRQINDDDGPMEEQRQRYGPPLYSLTSMILSVRLFLSISWARYD----------TKKLKREQ-IAILEQAVDVYTTELKRFLTFIS------------------
    30073.m002202_RICCO  ------------LLDFIRTINDDDGPMEEQRQRYGPPLYSLTAMVLSIRVLLSLSWAMFE----------DRKLKGHQ-VVVLEQAVDVYTREFERFIIFIG------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------TVI---------------------------------
    orange1.1g033790m_CI -----------------------------------------------------------------------LRRKRHQ-VAILEQAVDVYTSEFESFIKFIS------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ------------LLDFIRQINDDDGPMEEQRQRYGPPLYNLTKTVLIIRLFLSLAWQRFE----------AFKLNRHQ-ISVLEEAVDVYTSEFERFINFIS------------------
    Potri.T137900.1_POPT -------------------------------------------------------------------------------CVVLPQ-----------------------------------
    EG4P30120_ELAGV      ----------------------------------------------------------------------------DQ-LSVVQQAVHVYNSEFEKFIKFIG------------------
    Glyma16g34850.1_GLYM ------------LLDFTRQINDDDGPMEEQRHRYGPPLYSLTSMILSIQLFLSLSWARYD----------ANNLKMEQ-ITVLEQAVDVYTMELERFLTFIS------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1330      1340      1350      1360      1370      1380      1390      1400      1410      1420      1430      1440
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 ---------KVYANSPFFIRAED-----AGAT-ESRH-----------------------------------------------------------------------------------
    ITC1587_Bchr3_P06037 ---------KSY--------------------------DDYKETIIPPGKTHEFLNHRAEALLIYLASNLQ----------RDTLVAAFTNILRCYAITLTVESINSYIAWDFSLIQGTL
    Millet_GLEAN_1002488 ---------EVFVNAPFFISAED-----AGAA-DARKSDEYKETIIPAGKTHE--------------------------------------------VILSVEAINSYIAWDFSLQQGAL
    Medtr8g005040.1_MEDT ---------GVFANSPFFIPADV-----AGAV-EIRKNDDYKEISVPAGKTFE--------------------------------------------VILSVDSVNSYIAWDFSLVQGKI
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ---------EVFANSPFFISAEL-----AGAL-EAX------------------------------------------------------------------------------------
    cassava4.1_007896m_M ---------EVFANSPFFISAEV-----AGAL-DARTNDEFKETSVPAGQTHE--------------------------------------------VSLLVDSMNSYIAWDFSLIQGKM
    C.cajan_16359_CAJCA  ---------EVFANAPFFISAEV-----AGAL-EASKNDDYKEIGVPAGKTYE--------------------------------------------VLLTVDSVNSYIAWDFSLVQGKI
    PDK_30s914801g004_PH ---------EVFANSPFLISAED-----AGAA-ESRKSDEYKETMIPPGKTHE--------------------------------------------VILTVESVNSYIAWDFALIQGTL
    orange1.1g031496m_CI ---------GVFANSPFFISAEA-----AGAL-ETRKNDEYKEITIPAGKNFE--------------------------------------------VSFSVDSVNSYIAWDFSVVQGKI
    Potri.016G143700.1_P ---------EVFANSPFFISAEA-----AGAL-EAGNNDDYKEINVPAGKTYE--------------------------------------------VSLSVESVNSYIAWDFSLIQGKI
    cassava4.1_007842m_M ---------EVFANSPFFISAEV-----AGTL-GARKNDEFKEISVPAGRSYE--------------------------------------------VSLEVDSINSYIAWDFSLIQGKM
    orange1.1g025609m_CI ---------PICSS---FQSSES-----GCPQ----------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m ---------GVFANAPFFISAEG-----A----EAGKNDDYKEISVPAGKTYE--------------------------------------------VLLSVDSVNSYIAWDFSLVQGKI
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 ---------KSY--------------------------DDYKETIIPPGKTHE--------------------------------------------ITLTVESINSYIAWDFSLIQGTL
    Cre02.g117950.t1.1_C ---------NVFQHSPFILSKEDLEHGGAAAAAAATGGSANGDHHGPESAAVS--------------------------------------------ATSGTAAVHSAIA---DLVAAKE
    selmo_154057_SELMO   ---------EVFEHSPFLISAEE-----AGTNGGKTMVNDFKETVISTGKTHE--------------------------------------------VLLPVDSEGSYVAWEFKLTSGK-
    MDP0000119861_MALDO  ---------EVFANSPFFIPAEV-----AGAL-EGRNNDDYQETSVPAGKTHE--------------------------------------------VLLAVDAINSYIAWDFSLVTGED
    AK361991_HORVU       ---------EVFVNAPFFISAED-----AGA--DSRKNDEYRETIIPAGKTHE--------------------------------------------VILSVEAVNSYIAWDFSLQQGAL
    AT5G01010.2_ARATH    ---------DVFANSPFFISADT-----AGIL-WSRDNEEYKEIIVQAGRTYE--------------------------------------------ISLMVESENSYIAWDFSLMQGKI
    orange1.1g030723m_CI ---------GVFANSPFFISAEA-----AGAL-ETRKNDEYKEITIPAGKNFE--------------------------------------------VSFSVDSVNSYIAWDFSVVQGKI
    Bradi2g30810.1_BRADI ---------EVFVNAPFFISAED-----AGA--DSRTSDEYRETIIPAGKTHE--------------------------------------------VILSVEAVNSYIAWDFSLQQGAL
    MDP0000134594_MALDO  ---------QI---PPFXIPAEV-----AGAL-EGRNNDDYQEXSVPAGKTHE--------------------------------------------VLLAVDAINSYIAWDFSLVQGKI
    Ca_18921_CICAR       ---------AVFANSPFFIPADV-----AGAM-EVRKNDDYKETSVPAGKTYE--------------------------------------------VILSVDSVNSYIAWDFSLVQGKI
    orange1.1g030253m_CI ---------PICSS---FQSSES-----GCPQ----------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ---------PICSS---FQSSES-----GCPQ----------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  ---------EVFKNSPFFITPEE-----AGI--AASADQDYKEATIAAGKTHE--------------------------------------------VILPVKYEGALVAWDFRLTSGK-
    Cc06_g00030_COFCA    ---------EVFANSPFFITAED-----AGAL-EARNNDDFKEINIPAGKIYE--------------------------------------------VSLSVDSINSYIGWDFSLVQGRM
    Os05g24020.1_ORYSA   ---------EVFVNAPFFISAED-----AGA--ESRNSDDYKETIIPAGKTHE--------------------------------------------VILSVEAVNSYIAWDFSLQQGAL
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     -------------------------------------SVEYKETIIPPGKTHE-------------------------------------------------------------------
    PDK_30s772521g001_PH RHLCGYQFCEVFANSPFLVSAED-----VGTA-ESRKSDEYKETIIPPGKTHEQLIELWVVVRTGPEFPIPELEKPHWAIIQTTISFVNASDLRDPRVVLTVESVNSYIAWDFALIQGTL
    MDP0000320218_MALDO  -----------------------------------RNNDDYQETSVPAGKIHE-------------------------------------------------------------------
    Glyma03g00280.1_GLYM ---------EVFANAPFFISAEV-----AGAL-EARKNDDYKEINVPAGKTYE--------------------------------------------VLLSVDAVNSYIAWDFSLVQGTI
    GSVIVT01029830001_VI ---------EVFANSPFFISAED-----AGPI-EARKNDEYKEISIPAGKTHE--------------------------------------------VSLMVESINSYIAWDFSLAQGKM
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G ---------EVFANSPFFISAED-----ASML-EMGKNDEYKEITVPAGKSYE--------------------------------------------VSLTVESINSYIAWDFSLVQGKM
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ---------GVFANSPFFISAEA-----AGAL-ETRKNDEYKEITIPAGKNFE--------------------------------------------VSFSVDSVNSYIAWDFSVVQGKI
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE ---------EVFVNAPFFISAED-----AGAV-DARKSDEYKETIIPAGKTHE--------------------------------------------VILSVEAVNSYIAWDFSLQQGAL
    Solyc10g074690.1.1_S ---------DVFANSPFFITAEE-----AGTL-EARKSDEYKEVSVPAGKSHE--------------------------------------------VSLTVDAINSYIAWDFSLVQGRV
    orange1.1g025201m_CI ---------PICSS---FQSSES-----GCPQ----------------------------------------------------------------------------------------
    Phvul.010G060400.1_P ---------EVFANAPFFISAEV-----VGAL-EARKNDDYKEINIPAGKTYE--------------------------------------------VLLSVDVVNSYIAWDFSLVQGKI
    30073.m002202_RICCO  ---------EVFANAPFFISAEV-----AGAL-AGRTNDEFKEISVPAGKTHE--------------------------------------------VSLVVDSVNSYIAWDFSLIQGKM
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ---------GVFANSPFFISAEA-----AGAL-ETRKNDEYKEITIPAGKNFE--------------------------------------------VSFSVDSVNSYIAWDFSVVQGKI
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   ---------EVFANSPFFISAED-----ASMF-ETRKSDEYNEITVPAGKSYE--------------------------------------------VSLAVESINSYIAWDFSLVQGKM
    Potri.T137900.1_POPT ------------------------------------------------------------------------------------------------------------------------
    EG4P30120_ELAGV      ---------EVFANSPFLMSAED-----VGAA-ESSDPS-----------------------------------------------------------AVHVGSFAPPIS----------
    Glyma16g34850.1_GLYM ---------EVFANAPFFISAEV-----AGAL-EARKNDDYKEINVPAGKTYE--------------------------------------------VLLSVDAVNSYIAWDFSLVQGKI
    EG4P12564_ELAGV      -------------------------------------STNYCDPNKPSPGSVL-------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550      1560
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 -------------------------------------------------------------FLP--------------------------------------------------------
    ITC1587_Bchr3_P06037 SH-----------------------------------------DIGFHVE-YVNPSGDVTLILP--------------------------------------------------------
    Millet_GLEAN_1002488 NM-----------------------------------------DIGFHVE-YISPSGEKTLILP--------------------------------------------------------
    Medtr8g005040.1_MEDT NM-----------------------------------------DIGFSLE-FASPTGEKILMLP--------------------------------------------------------
    Potri.006G114000.1_P ------------------------------------------------------------LILP--------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M NM-----------------------------------------DIGFSVE-CVDPSGQKTLILP--------------------------------------------------------
    C.cajan_16359_CAJCA  NM-----------------------------------------DIGFSLE-FVSSTGEKTPMLP--------------------------------------------------------
    PDK_30s914801g004_PH SL-----------------------------------------DLEQQLH-SSLIRLGQHVGPL--------------------------------------------------------
    orange1.1g031496m_CI ST-----------------------------------------DIGFSLE-YTNESGEKTLILP--------------------------------------------------------
    Potri.016G143700.1_P NM-----------------------------------------DIGFSVE-CTDPTGKKTLILP--------------------------------------------------------
    cassava4.1_007842m_M ST-----------------------------------------DVGFSVE-YVDPSGQKTLILP--------------------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m NM-----------------------------------------DIGFSLE-FESPSGEKILMLP--------------------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 SH-----------------------------------------DIGFHVE-YVNPSGDVTLILP--------------------------------------------------------
    Cre02.g117950.t1.1_C VAGAGLAEVKTATPVTSTSGAAPAATHAALDTGSSGGRAVSSVGASTSAT-AVGLSGAGSLVAPATPAATAPDAVGRGTALNPSGFIAYLTAPAAASAPALLPQHASQAESQSHSGTLPP
    selmo_154057_SELMO   -------------------------------------------DVGFSVE-YISSNGAKMQMLP--------------------------------------------------------
    MDP0000119861_MALDO  XLGIVPKRCWSYVVYLKFL------------------------QCKFHIEIYVCWSG---------------------------------------------------------------
    AK361991_HORVU       STLL---------------------------------------DIGFHVE-YISPSQEKTLILP--------------------------------------------------------
    AT5G01010.2_ARATH    SMLPYIRFLLLYLLLFLPDSGYLCFHTYFCCLSSVYISVVFYQDIGFSVE-YINASGEKTLILP--------------------------------------------------------
    orange1.1g030723m_CI ST-----------------------------------------DIGFSLE-YTNESGEKTLILP--------------------------------------------------------
    Bradi2g30810.1_BRADI GTLL---------------------------------------DIGFHVE-YISLSGEKTLILP--------------------------------------------------------
    MDP0000134594_MALDO  NL-----------------------------------------DIGFSVE-YTNSSGEKSLILP--------------------------------------------------------
    Ca_18921_CICAR       NM-----------------------------------------DIGFSLE-FSSPTGEKTLMLP--------------------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  -------------------------------------------DIGFSVE-LVDSSRATRPMFP--------------------------------------------------------
    Cc06_g00030_COFCA    NM-----------------------------------------DIGFSVE-YTDAAGQKTLILP--------------------------------------------------------
    Os05g24020.1_ORYSA   NMVL---------------------------------------DIGFHVE-YISPSGQKTLILP--------------------------------------------------------
    PDK_30s661041g004_PH ------------------------------------------------------------------------------------------------------------------------
    EG4P152087_ELAGV     -------------------------------------------DIGFRME-YVSPSGEVT------------------------------------------------------------
    PDK_30s772521g001_PH NLDSPRQQSCCSSTMIV--------------------------DIGFHVE-YVSPSGEITLILP--------------------------------------------------------
    MDP0000320218_MALDO  -------------------------------------------DIGFSVE-YTNPSGQKSLILP--------------------------------------------------------
    Glyma03g00280.1_GLYM NM-----------------------------------------DIGFSLE-FLSPTGEKTLMLP--------------------------------------------------------
    GSVIVT01029830001_VI NV-----------------------------------------DIGFSME-YTNASGDKTLILP--------------------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G NM-----------------------------------------DIGFSVE-YTNNGGEKTLILP--------------------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ST-----------------------------------------DIGFSLE-YTNESGEKTVS----------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE NMVL---------------------------------------DIGFHVE-YISPSGEKTLILP--------------------------------------------------------
    Solyc10g074690.1.1_S DM-----------------------------------------DIGFSME-YTDPSGQKTQILP--------------------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P NM-----------------------------------------DIGFSLE-FVSPTGEKTLMLP--------------------------------------------------------
    30073.m002202_RICCO  NV-----------------------------------------DIGFSVE-YMDPSGKRSLILP--------------------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI STVYLFIYN----------------------------------SFRLSLQ-T--------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   NM-----------------------------------------DIGFSVE-YTNTVGEKTLILP--------------------------------------------------------
    Potri.T137900.1_POPT ------------------------------------------------------------LILP--------------------------------------------------------
    EG4P30120_ELAGV      -------------------------------------------------P-YLTPPGPPLM-----------------------------------------------------------
    Glyma16g34850.1_GLYM NM-----------------------------------------DIGFSLE-FVSPTGEKTLMLP--------------------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1570      1580      1590      1600      1610      1620      1630      1640      1650      1660      1670      1680
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 --------------------------------------H---------FI------SC------LHFPPSLNVF----------------------------------------------
    ITC1587_Bchr3_P06037 --------------------------------------YRRYASDQGNFC------TILAGSYKLKWDNSYSTF----------------------------------------------
    Millet_GLEAN_1002488 --------------------------------------YRRYEADQGNFC------TVSAGSYKLVWDNSYSSF----------------------------------------------
    Medtr8g005040.1_MEDT --------------------------------------YRRYESEQGNFC------TLMAGSYKLIWDNTHSTF----------------------------------------------
    Potri.006G114000.1_P --------------------------------------HRRYESDQVRRH------AGH-------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M --------------------------------------YRRCEADQGNFC------TCMAGTYKLIWDNSYSAF----------------------------------------------
    C.cajan_16359_CAJCA  --------------------------------------YRRFESDQGNFC------TLMAGSYKLIWDNTYSTF----------------------------------------------
    PDK_30s914801g004_PH --------------------------------------WGRRASMAGMLLGPSFLGSFFTEAFDLMPDQNYVLMDTAANFALTYYMFMVAVELDVRAIRGMGRKVLIITVVGMVLALVVS
    orange1.1g031496m_CI --------------------------------------YRRHESDQGNFC------TVLVGNYKLLWDNTYSTF----------------------------------------------
    Potri.016G143700.1_P --------------------------------------YRRYESDQGNFS------TCVSGNYKLIWDNSYSAF----------------------------------------------
    cassava4.1_007842m_M --------------------------------------YRRYESDQGNFC------TCMAGMYKLIWDNSYSTF----------------------------------------------
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m --------------------------------------YGRYETDQGNFC------TLMAGSYKLIWDNSYSTF----------------------------------------------
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 --------------------------------------YRRYVSDQGNFC------TILAGSYKLKWDNSYSTF----------------------------------------------
    Cre02.g117950.t1.1_C RHTPLSRHDTPAPTHLVPSPNGRGLVTPEAALLPSPGAHRTYNAQAGATSGGYGRTSANGGRVSLTGDSQCSFTSAPEDAPWHHPEAGYHETAADGGLGIGQLFLGCLGLGSHGRAGAGA
    selmo_154057_SELMO   --------------------------------------YQRYDSHQGNFY------SPGVGSYKLVWDNSYSTF----------------------------------------------
    MDP0000119861_MALDO  ------------------------------------------------------------------------------------------------------------------------
    AK361991_HORVU       --------------------------------------YRRYEADQGNFC------TVFAGSYKLVWDNSYSTF----------------------------------------------
    AT5G01010.2_ARATH    --------------------------------------YRRYEADQGNFS------TLMAGNYKLVWDNSYSTF----------------------------------------------
    orange1.1g030723m_CI --------------------------------------YRRHESDQGNFC------TVLVGNYKLLWDNTYSTF----------------------------------------------
    Bradi2g30810.1_BRADI --------------------------------------YRRYEADQGNFC------TVSAGSYKLVWDNSYSTF----------------------------------------------
    MDP0000134594_MALDO  --------------------------------------YRRYDSDQGNFC------TCEAGXYKLIWDNSYSNF----------------------------------------------
    Ca_18921_CICAR       --------------------------------------YRRYESDQGNFC------TLMAGSYKLIWDNTHSTF----------------------------------------------
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------LC------TT--------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  --------------------------------------YQRYETHQGSFQ------SPCVGNYRLVWDNTYSNF----------------------------------------------
    Cc06_g00030_COFCA    --------------------------------------YGRYESDQGNFC------TCMAGNYRLVWDNSFSAF----------------------------------------------
    Os05g24020.1_ORYSA   --------------------------------------YRRYEADQGNFC------TVSAGSYKLVWDNSYSSF----------------------------------------------
    PDK_30s661041g004_PH ---------------------------------------------------------------------HYKCF----------------------------------------------
    EG4P152087_ELAGV     -------------------------------------------GHNAPKC----------------------------------------------------------------------
    PDK_30s772521g001_PH --------------------------------------YRRYESDQGNFC------TILAGSYKLIWDNSYSLL----------------------------------------------
    MDP0000320218_MALDO  --------------------------------------YRRFESDQ--------------------------------------------------------------------------
    Glyma03g00280.1_GLYM --------------------------------------YRRYESDQGNFC------TLMAGSYKLIWDNTYSTF----------------------------------------------
    GSVIVT01029830001_VI --------------------------------------YRRYESDQGNFC------TCMAGNYKLIWDNSYSTF----------------------------------------------
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G --------------------------------------YRRYESDQGNFS------TCMAGNYKLIWDNSYSAF----------------------------------------------
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE --------------------------------------YRRYEADQGNFC------TVSSGSYKLVWDNSYSSF----------------------------------------------
    Solyc10g074690.1.1_S --------------------------------------YRRYGADQGNFC------TCLSGNYKLIWDNSYSTF----------------------------------------------
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P --------------------------------------SRRYESDQGNFC------TLMAGSYKLIWDNTYSTF----------------------------------------------
    30073.m002202_RICCO  --------------------------------------YRRYESDQGNFS------TVTAGNYKLIWDNSYSAF----------------------------------------------
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   --------------------------------------YRRYESDQGNFS------TCMAGNYKLIWDNSYSTF----------------------------------------------
    Potri.T137900.1_POPT --------------------------------------YRRYESDQGNFS------TCVSGNYKLIWDNSYSAF----------------------------------------------
    EG4P30120_ELAGV      ---------------------------------------------QGNFC------TILVGSYKLIWDNSYSTF----------------------------------------------
    Glyma16g34850.1_GLYM --------------------------------------YGRYESDQGNFC------TLMAGSYKLIWDNTYSTF----------------------------------------------
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1690      1700      1710      1720      1730      1740      1750      1760      1770      1780      1790      1800
                         =========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+=========+
    GSMUA_Achr3P09590_00 --------------------------------------------------------------------------------------LKFS------------------------------
    ITC1587_Bchr3_P06037 --------------------------------------------------------------------------------------SKKSLR-------YKV-DAVPPVVDTPQPIDE--
    Millet_GLEAN_1002488 --------------------------------------------------------------------------------------FKKSLR-------YKV-DAVPPVVEPAVPALE--
    Medtr8g005040.1_MEDT --------------------------------------------------------------------------------------FRKVLR-------YKV-DCIPPVAEPVPFD----
    Potri.006G114000.1_P ------------------------------------------------------------------------------------------------------------------------
    supercontig_1919.1_C ------------------------------------------------------------------------------------------------------------------------
    cassava4.1_007896m_M --------------------------------------------------------------------------------------FKKVIR-------YKV-DCIPPVVEPMQSAND--
    C.cajan_16359_CAJCA  --------------------------------------------------------------------------------------FKKVLR-------YKI-DCIPPVTESVQSN----
    PDK_30s914801g004_PH FTSAHGLGLRPDIVIKIPGFSDPPAKLRNDKKVLPFLLFFSLAISVTGLPVLARIITEIKLLNSPLGPLSMGSAILNDLPLRQPKVIAEIIKNLQLEYGQAKGLGATGVLHTLYPNKRCR
    orange1.1g031496m_CI --------------------------------------------------------------------------------------FKKVLR--------RG-LVIP-------------
    Potri.016G143700.1_P --------------------------------------------------------------------------------------FKKVLR-------YKV-DCIPPVVEPVQSAGE--
    cassava4.1_007842m_M --------------------------------------------------------------------------------------FKKVVR-------YKV-DCIPPVVEPAQSTNE--
    orange1.1g025609m_CI ------------------------------------------------------------------------------------------------------------------------
    chr3.CM0634.420.r2.m --------------------------------------------------------------------------------------FKKVIR-------YKV-DCIPPVTEPAQAD----
    Sb09g012090.1_SORBI  ------------------------------------------------------------------------------------------------------------------------
    GSMUA_Achr3P09600_00 --------------------------------------------------------------------------------------SKKSLR-------YKV-DAVPPVVDTPHPIDE--
    Cre02.g117950.t1.1_C GPG----------------------------------------------------------------------------------------------------ATAPPPANGHPLAGDKA
    selmo_154057_SELMO   --------------------------------------------------------------------------------------YRKTVR-------YKV-DAIPPVADAQKLEDQN-
    MDP0000119861_MALDO  ---------------------------------------------------------------------------------------------------YWI------------------
    AK361991_HORVU       --------------------------------------------------------------------------------------FKKTLR-------YKV-DAVPSVTEPMEHVVE--
    AT5G01010.2_ARATH    --------------------------------------------------------------------------------------FKKTLR-------YKV-DCIAPVVEPDPEPEP--
    orange1.1g030723m_CI --------------------------------------------------------------------------------------FKKVLR-------YRV-DCIPPVVEPMQPTNE--
    Bradi2g30810.1_BRADI --------------------------------------------------------------------------------------FKKTLR-------YKV-DAVPPVVEPAEPVVA--
    MDP0000134594_MALDO  --------------------------------------------------------------------------------------FKK-------------------------------
    Ca_18921_CICAR       --------------------------------------------------------------------------------------FRKVLR-------YKV-DCIPPVTEPVQFD----
    orange1.1g030253m_CI ------------------------------------------------------------------------------------------------------------------------
    MA_949559g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g025408m_CI ------------------------------------------------------------------------------------------------------------------------
    Pp1s77_45V6.1_PHYPA  --------------------------------------------------------------------------------------YRKYLR-------YKV-DEIPPVLEEAVIEGTEV
    Cc06_g00030_COFCA    --------------------------------------------------------------------------------------FGKVLR-------YKV-DCIPPVVEPVSS-----
    Os05g24020.1_ORYSA   --------------------------------------------------------------------------------------FKKSLR-------YKV-DAVPPVVAPAEPAAE--
    PDK_30s661041g004_PH --------------------------------------------------------------------------------------YATV------------------------------
    EG4P152087_ELAGV     ------------------------------------------------------------------------------------------------------------------------
    PDK_30s772521g001_PH --------------------------------------------------------------------------------------TGKFLHNLGGILQTHMGQFLFHIFQKGSQASA--
    MDP0000320218_MALDO  -----------------------------------------------------------------------------------------VLR-------YKV-DCIPPVTEPVEPATEAE
    Glyma03g00280.1_GLYM --------------------------------------------------------------------------------------FKKVLR-------YKI-DCIPPVTDSVQSD----
    GSVIVT01029830001_VI --------------------------------------------------------------------------------------FKKVLR-------YKV-DCIPPVVEPVAAATD--
    MA_48204g0010_PICAB  ------------------------------------------------------------------------------------------------------------------------
    Gorai.005G001100.1_G --------------------------------------------------------------------------------------FKKALR-------YKV-DCIPPVLEESEKGSE--
    MA_702204g0010_PICAB ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033639m_CI ------------------------------------------------------------------------------------------------------------------------
    MDP0000266721_MALDO  ------------------------------------------------------------------------------------------------------------------------
    GRMZM2G424783_P02_ZE --------------------------------------------------------------------------------------FKKVLR-------YKV-DAVPPVVEPALSATE--
    Solyc10g074690.1.1_S --------------------------------------------------------------------------------------FKKVLR-------FKV-DCIPPVVEPVLSSD---
    orange1.1g025201m_CI ------------------------------------------------------------------------------------------------------------------------
    Phvul.010G060400.1_P --------------------------------------------------------------------------------------FKKVIR-------YKI-DCIPPVTEPVQSDSN--
    30073.m002202_RICCO  --------------------------------------------------------------------------------------FKKVLR-------YKV-DCIPPVVEPLQSTDQ--
    orange1.1g028422m_CI ------------------------------------------------------------------------------------------------------------------------
    orange1.1g033790m_CI ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279720.1_CUCSA ------------------------------------------------------------------------------------------------------------------------
    Tc00_g080870_THECC   --------------------------------------------------------------------------------------FKKALR-------YKV-DCIPPVLDSAES-----
    Potri.T137900.1_POPT --------------------------------------------------------------------------------------FKKVLR-------YKV-DCIPPVVEPVQSAGE--
    EG4P30120_ELAGV      --------------------------------------------------------------------------------------FKKLMK-------SELKDFAGPIVISGPSDPV--
    Glyma16g34850.1_GLYM --------------------------------------------------------------------------------------FKKVLR-------YKI-DCIPPVTESVQSD----
    EG4P12564_ELAGV      ------------------------------------------------------------------------------------------------------------------------
    Cucsa.279710.1_CUCSA ------------------------------------------------------------------------------------------------------------------------

    Selected Cols:                                                                                                                               

    Gaps Scores:                                                                                                                                 

                               1810
                         =========
    GSMUA_Achr3P09590_00 ---------
    ITC1587_Bchr3_P06037 P--------
    Millet_GLEAN_1002488 P--------
    Medtr8g005040.1_MEDT ---------
    Potri.006G114000.1_P ---------
    supercontig_1919.1_C ---------
    cassava4.1_007896m_M ---A-----
    C.cajan_16359_CAJCA  ---------
    PDK_30s914801g004_PH FELLLDSLS
    orange1.1g031496m_CI ---------
    Potri.016G143700.1_P MEE------
    cassava4.1_007842m_M ---VER---
    orange1.1g025609m_CI ---------
    chr3.CM0634.420.r2.m ---------
    Sb09g012090.1_SORBI  ---------
    GSMUA_Achr3P09600_00 P--------
    Cre02.g117950.t1.1_C GQELGPIAE
    selmo_154057_SELMO   ---------
    MDP0000119861_MALDO  ---------
    AK361991_HORVU       A--------
    AT5G01010.2_ARATH    LN-------
    orange1.1g030723m_CI AE-------
    Bradi2g30810.1_BRADI P--------
    MDP0000134594_MALDO  ---------
    Ca_18921_CICAR       ---------
    orange1.1g030253m_CI ---------
    MA_949559g0010_PICAB ---------
    orange1.1g025408m_CI ---------
    Pp1s77_45V6.1_PHYPA  STSSDSTLT
    Cc06_g00030_COFCA    ---------
    Os05g24020.1_ORYSA   P--------
    PDK_30s661041g004_PH ---------
    EG4P152087_ELAGV     ---------
    PDK_30s772521g001_PH VSYLS----
    MDP0000320218_MALDO  E--------
    Glyma03g00280.1_GLYM ---------
    GSVIVT01029830001_VI ---VKV---
    MA_48204g0010_PICAB  ---------
    Gorai.005G001100.1_G RNEVEE---
    MA_702204g0010_PICAB ---------
    orange1.1g033639m_CI ---------
    MDP0000266721_MALDO  ---------
    GRMZM2G424783_P02_ZE L--------
    Solyc10g074690.1.1_S ---------
    orange1.1g025201m_CI ---------
    Phvul.010G060400.1_P KNEGEVETG
    30073.m002202_RICCO  ---VEG---
    orange1.1g028422m_CI ---------
    orange1.1g033790m_CI ---------
    Cucsa.279720.1_CUCSA ---------
    Tc00_g080870_THECC   -NEVEG---
    Potri.T137900.1_POPT MEE------
    EG4P30120_ELAGV      S--------
    Glyma16g34850.1_GLYM ---------
    EG4P12564_ELAGV      ---------
    Cucsa.279710.1_CUCSA ---------

    Selected Cols:                

    Gaps Scores: