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GreenPhyl V1 Families



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Number of clusters: 5736

  Family Id Family Name Number of sequences Access Owner
Disease resistance protein (CC-NBS-LRR class) group4. Only ORYZA [OBSOLETE]
GPV1_2195_4
Disease resistance protein (CC-NBS-LRR class) group4. Only ORYZA 5 public - read only greenphyl_v1
DNA helicase [OBSOLETE]
GPV1_3154_4
DNA helicase 4 public - read only greenphyl_v1
DUF26 +KD (ex group 3) [OBSOLETE]
GPV1_6121_4
DUF26 +KD (ex group 3) 109 public - read only greenphyl_v1
Elongation factor 1-alpha / EF-1 family [OBSOLETE]
GPV1_379_4
Elongation factor 1-alpha / EF-1 family 23 public - read only greenphyl_v1
Elongation factor EF-Tu family [OBSOLETE]
GPV1_3183_4
Elongation factor EF-Tu family 5 public - read only greenphyl_v1
ER 2-Lysophosphatidate Acyltransferase [OBSOLETE]
GPV1_4825_4
ER 2-Lysophosphatidate Acyltransferase 3 public - read only greenphyl_v1
ER2-Lysophosphatidate Acyltransferase [OBSOLETE]
GPV1_1713_4
ER2-Lysophosphatidate Acyltransferase 7 public - read only greenphyl_v1
ERF subfamily 1 [OBSOLETE]
GPV1_34_4
ERF subfamily 1 200 public - read only greenphyl_v1
ERF subfamily 2 (DREB) [OBSOLETE]
GPV1_164_4
ERF subfamily 2 (DREB) 44 public - read only greenphyl_v1
ERF subfamily 3 (DREB) [OBSOLETE]
GPV1_1248_4
ERF subfamily 3 (DREB) 8 public - read only greenphyl_v1
ERF subfamily 4. Only ARATH [OBSOLETE]
GPV1_3820_4
ERF subfamily 4. Only ARATH 3 public - read only greenphyl_v1
Expansin-Like family A [OBSOLETE]
GPV1_1030_4
Expansin-Like family A 10 public - read only greenphyl_v1
Expressed or hypothetical protein group. Only ORYZA [OBSOLETE]
GPV1_2781_4
Expressed or hypothetical protein group. Only ORYZA 4 public - read only greenphyl_v1
Extensin (ex group 3) [OBSOLETE]
GPV1_6116_4
Extensin (ex group 3) 15 public - read only greenphyl_v1
Flagellar calcium-binding family (calflagin) [OBSOLETE]
GPV1_5739_4
Flagellar calcium-binding family (calflagin) 12 public - read only greenphyl_v1
FtsH family [OBSOLETE]
GPV1_259_4
FtsH family 35 public - read only greenphyl_v1
GDSL-motif lipase/hydrolase subfamily 1 [OBSOLETE]
GPV1_46_4
GDSL-motif lipase/hydrolase subfamily 1 144 public - read only greenphyl_v1
GDSL-motif lipase/hydrolase subfamily 2 [OBSOLETE]
GPV1_73_4
GDSL-motif lipase/hydrolase subfamily 2 106 public - read only greenphyl_v1
Glutaredoxin 3 subfamily [OBSOLETE]
GPV1_2263_4
Glutaredoxin 3 subfamily 4 public - read only greenphyl_v1
Glyceraldehyde-3-phosphate dehydrogenase (NADP) [OBSOLETE]
GPV1_4975_4
Glyceraldehyde-3-phosphate dehydrogenase (NADP) 4 public - read only greenphyl_v1
Glycoside Hydrolase family 31 subfamily 1 Alpha-glucosidase [OBSOLETE]
GPV1_1414_4
Glycoside Hydrolase family 31 subfamily 1 Alpha-glucosidase 8 public - read only greenphyl_v1
Glycoside Hydrolase family 31 subfamily 2 contains IPR000294 [OBSOLETE]
GPV1_4899_4
Glycoside Hydrolase family 31 subfamily 2 contains IPR000294 3 public - read only greenphyl_v1
Glycosyl hydrolase family 17 subfamily 1 [OBSOLETE]
GPV1_44_4
Glycosyl hydrolase family 17 subfamily 1 84 public - read only greenphyl_v1
Glycosyl hydrolase family 17 subfamily 2 [OBSOLETE]
GPV1_342_4
Glycosyl hydrolase family 17 subfamily 2 53 public - read only greenphyl_v1
Homeobox-leucine zipper subfamily 3 with Start Domain [OBSOLETE]
GPV1_706_4
Homeobox-leucine zipper subfamily 3 with Start Domain 13 public - read only greenphyl_v1
Hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyltransferase family (HTC) [OBSOLETE]
GPV1_1889_4
Hydroxycinnamoyl CoA:shikimate/quinate hydroxycinnamoyltransferase family (HTC) 8 public - read only greenphyl_v1
Hydroxyproline-rich glycofamily [OBSOLETE]
GPV1_1953_4
Hydroxyproline-rich glycofamily 6 public - read only greenphyl_v1
Ketoacyl-ACP Reductase family [OBSOLETE]
GPV1_976_4
Ketoacyl-ACP Reductase family 11 public - read only greenphyl_v1
Kinase + LRR group. [OBSOLETE]
GPV1_828_4
Kinase + LRR group. 13 public - read only greenphyl_v1
Kinase group 10 . Only ARATH [OBSOLETE]
GPV1_1909_4
Kinase group 10 . Only ARATH 6 public - read only greenphyl_v1
L-LEC (ex group 3) [OBSOLETE]
GPV1_6115_4
L-LEC (ex group 3) 9 public - read only greenphyl_v1
Large subunit ribosomal protein L13 family [OBSOLETE]
GPV1_1852_4
Large subunit ribosomal protein L13 family 9 public - read only greenphyl_v1
LAS/SCR/SHR subfamily [OBSOLETE]
GPV1_153_4
LAS/SCR/SHR subfamily 48 public - read only greenphyl_v1
Lectin family Only ARATH [OBSOLETE]
GPV1_2021_4
Lectin family Only ARATH 6 public - read only greenphyl_v1
Lectin protein kinase family [OBSOLETE]
GPV1_47_4
Lectin protein kinase family 143 public - read only greenphyl_v1
Light-harvesting complex II chlorophyll a/b binding protein 4 [OBSOLETE]
GPV1_2444_4
Light-harvesting complex II chlorophyll a/b binding protein 4 6 public - read only greenphyl_v1
Long-chain-fatty-acid--CoA ligase family [OBSOLETE]
GPV1_311_4
Long-chain-fatty-acid--CoA ligase family 28 public - read only greenphyl_v1
LRK10L-2 (ex group 3) [OBSOLETE]
GPV1_6108_4
LRK10L-2 (ex group 3) 16 public - read only greenphyl_v1
LRR + KD (ex group 3) [OBSOLETE]
GPV1_6120_4
LRR + KD (ex group 3) 172 public - read only greenphyl_v1
LRR group 1-4: LRR+ KD (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_8_4
LRR group 1-4: LRR+ KD (ex subdivision group 9 level 3) 353 public - read only greenphyl_v1
LRR group 2-4: only LRR (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6106_4
LRR group 2-4: only LRR (ex subdivision group 9 level 3) 296 public - read only greenphyl_v1
LRR group 3-4: KD (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6105_4
LRR group 3-4: KD (ex subdivision group 9 level 3) 15 public - read only greenphyl_v1
LRR group 4-4 (ex subdivision group 9 level 3) [OBSOLETE]
GPV1_6104_4
LRR group 4-4 (ex subdivision group 9 level 3) 30 public - read only greenphyl_v1
LRR-RLK (mostly subgroup LRR III) [OBSOLETE]
GPV1_65_4
LRR-RLK (mostly subgroup LRR III) 27 public - read only greenphyl_v1
LRR-RLK (sous-group LRRIa and c) [OBSOLETE]
GPV1_59_4
LRR-RLK (sous-group LRRIa and c) 117 public - read only greenphyl_v1
LysM-I and M-II (ex group 3) [OBSOLETE]
GPV1_6113_4
LysM-I and M-II (ex group 3) 20 public - read only greenphyl_v1
Macrophage migration inhibitory factor family [OBSOLETE]
GPV1_1252_4
Macrophage migration inhibitory factor family 9 public - read only greenphyl_v1
MAP4K - STE20-PAK Like Protein Kinase [OBSOLETE]
GPV1_582_4
MAP4K - STE20-PAK Like Protein Kinase 15 public - read only greenphyl_v1
MAPKKK family ZIK subfamily [OBSOLETE]
GPV1_296_4
MAPKKK family ZIK subfamily 29 public - read only greenphyl_v1
Md-I Arabidopsis specific [OBSOLETE]
GPV1_4121_4
Md-I Arabidopsis specific 3 public - read only greenphyl_v1