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Family GPV2_108_1


Family ID
Zinc finger (C3HC4-type RING finger) family [OBSOLETE]
GPV2_108_1 OBSOLETE  add to my list
Family name Zinc finger (C3HC4-type RING finger) family
Creation date (last update: 2014-05-27 09:52:08)
Level 1
Owner greenphyl_v2
Evidence PubMed
Access public - read only
Family description / comments Paper:Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome.
Sequences 554




Level Family ID (number of sequences)
1 GPV2_108_1 (554)
2 GPV2_444_2 (147) GPV2_1032_2 (46) GPV2_1119_2 (59) GPV2_1711_2 (40) GPV2_1781_2 (31) GPV2_2048_2 (39) GPV2_2446_2 (30) GPV2_2449_2 (8) GPV2_3318_2 (5)
Heat shock protein DnaJ subfamily 9 [OBSOLETE]
GPV2_4117_2 (64) GPV2_4146_2 (19) GPV2_6058_2 (18)
3 GPV2_666_3 (119) GPV2_2078_3 (20)
RING-HC Cluster 1.2 [OBSOLETE]
GPV2_1076_3 (38) GPV2_1027_3 (59) GPV2_1966_3 (35) GPV2_1708_3 (31) GPV2_1983_3 (39) GPV2_2385_3 (30)
Ring-hc cluster 1.11 [OBSOLETE]
GPV2_4198_3 (7) GPV2_4164_3 (64) GPV2_3105_3 (19) GPV2_937_3 (22) GPV2_4056_3 (13)
4
RING-HC Cluster 1.20 [OBSOLETE]
GPV2_1998_4 (46)
RING-HC Cluster 1.23 [OBSOLETE]
GPV2_2001_4 (25) GPV2_2001_4 (25) GPV2_1138_4 (37)
RING-HC Cluster 1.5 [OBSOLETE]
GPV2_960_4 (59) GPV2_1883_4 (35)
RING-HC Cluster 1.13 [OBSOLETE]
GPV2_2002_4 (30) GPV2_1904_4 (39)
Ring-hc cluster 1.24 [OBSOLETE]
GPV2_4228_4 (30) GPV2_4194_4 (17) GPV2_1140_4 (17)
RING-HC Cluster 1.19 [OBSOLETE]
GPV2_4028_4 (13)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 554
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
1 1
24 24
34 34
43 55
28 28
30 47
44 44
41 41
50 62
26 26
62 62
27 27
38 38
56 62


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