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Family GPV1_48_1


Family ID
See at level 2 [OBSOLETE]
GPV1_48_1 OBSOLETE  add to my list
Family name See at level 2
Creation date (last update: 2014-05-27 10:53:01)
Level 1
Owner greenphyl_v1
Evidence N/A
Access public - read only
Family description / comments
Sequences 241




Level Family ID (number of sequences)
1 GPV1_48_1 (241)
2
U-box family [OBSOLETE]
GPV1_67_2 (111)
Importin alpha family (IMPA) [OBSOLETE]
GPV1_483_2 (23)
Armadillo/beta-catenin repeat family 2 [OBSOLETE]
GPV1_655_2 (18)
E3 ubiquitin protein ligase family (UPL) [OBSOLETE]
GPV1_1244_2 (8)
Armadillo and U-box domain-containing protein family [OBSOLETE]
GPV1_1263_2 (9)
C2 domain-containing protein / armadillo/beta-catenin repeat family [OBSOLETE]
GPV1_1936_2 (5)
HECT-domain containing protein family (ubiquitin-transferase) [OBSOLETE]
GPV1_2082_2 (7)
Soluble quinoprotein glucose dehydrogenase domain containing protein family [OBSOLETE]
GPV1_2239_2 (7)
Expressed or hypothetical protein group. Only ORYZA [OBSOLETE]
GPV1_2393_2 (5)
U-box domain-containing protein family [OBSOLETE]
GPV1_2478_2 (5)
Expressed or hypothetical protein group. Only ORYZA [OBSOLETE]
GPV1_2539_2 (5) GPV1_2540_2 (7)
Armadillo/beta-catenin repeat family protein / F-box family protein [OBSOLETE]
GPV1_3030_2 (4) GPV1_3031_2 (4)
Expressed or hypothetical protein group [OBSOLETE]
GPV1_4012_2 (3)
WD-40 repeat subfamily 35 [OBSOLETE]
GPV1_4016_2 (3)
Ubiquitin and HECT domain containing protein family [OBSOLETE]
GPV1_4096_2 (3)
3 GPV1_105_3 (75) GPV1_1153_3 (11) GPV1_1360_3 (8) GPV1_1384_3 (8) GPV1_1581_3 (7) GPV1_4034_3 (3) GPV1_4035_3 (3) GPV1_419_3 (23) GPV1_695_3 (16) GPV1_13_3 (160) GPV1_2057_3 (5) GPV1_1175_3 (9) GPV1_1866_3 (5) GPV1_2021_3 (7) GPV1_2697_3 (6) GPV1_105_3 (75)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4037_3 (3) GPV1_1360_3 (8) GPV1_1581_3 (7)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_5320_3 (3) GPV1_2473_3 (7) GPV1_4036_3 (3) GPV1_2995_3 (4) GPV1_4038_3 (3) GPV1_4043_3 (3) GPV1_4135_3 (3)
4
Plant U-box protein (PUB) Class II [OBSOLETE]
GPV1_155_4 (48) GPV1_1813_4 (6) GPV1_1827_4 (6)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1828_4 (6)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_3998_4 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_4184_4 (3) GPV1_1767_4 (8)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4408_4 (3)
Only ARATH [Automatic annotation] [OBSOLETE]
GPV1_2987_4 (4) GPV1_1315_4 (8) GPV1_1813_4 (6) GPV1_3997_4 (3) GPV1_3999_4 (3) GPV1_443_4 (20) GPV1_972_4 (12)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4185_4 (5) GPV1_41_4 (68)
Uniquement riz, retrotransposon putatifs [OBSOLETE]
GPV1_55_4 (26) GPV1_167_4 (20)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_309_4 (3) GPV1_852_4 (5)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_1556_4 (6) GPV1_1789_4 (4) GPV1_2310_4 (4)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4491_4 (0)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4625_4 (1)
Only ORYZA [Automatic annotation] [OBSOLETE]
GPV1_4626_4 (2) GPV1_2427_4 (4) GPV1_1279_4 (8) GPV1_1775_4 (5) GPV1_1943_4 (7) GPV1_2632_4 (6) GPV1_155_4 (48) GPV1_1813_4 (6) GPV1_1827_4 (6) GPV1_1828_4 (6) GPV1_3998_4 (3) GPV1_4184_4 (3) GPV1_1828_4 (6) GPV1_2987_4 (4) GPV1_1813_4 (6) GPV1_2397_4 (7) GPV1_4000_4 (3) GPV1_2923_4 (4) GPV1_4001_4 (3) GPV1_4008_4 (3) GPV1_4116_4 (3)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 241
Species Count (w/o splice) Count (w/ splice)
113 130
99 111


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