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Family GP005066_V3


Family ID
Expressed or hypothetical protein group (plant-specificity: 100%) [OBSOLETE]
GP005066_V3 OBSOLETE  add to my list
Family name Expressed or hypothetical protein group
Creation date (last update: 2016-09-27 13:09:26)
Level 1
Type group
Owner greenphyl_v3
Evidence N/A
Access public - read only
Family description / comments
Sequences 17
Associated GPv4 family
Expressed or hypothetical protein group (plant-specificity: 100%)
GP005066




Level Family ID (number of sequences)
1 GP005066_V3 (17)
2
(plant-specificity: 100%) [OBSOLETE]
GP023707_V3 (12)
(plant-specificity: 100%) [OBSOLETE]
GP027090_V3 (5)
3
(plant-specificity: 100%) [OBSOLETE]
GP049794_V3 (10) GP062715_V3 (2)
(plant-specificity: 100%) [OBSOLETE]
GP053624_V3 (5)
4
(plant-specificity: 100%) [OBSOLETE]
GP082304_V3 (7) GP088455_V3 (3) GP096637_V3 (2) GP090857_V3 (3) GP097837_V3 (2)
Table 1: This table displays which relationship has the selected custom family with other families.






Sequence total: 17
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
4 4
2 2
3 3
1 1
2 2
2 2


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[Masking step 1 details] [Masking step 2 details] [Filtration details]

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Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
17 17 (100%) 17 (100%) [103; 130; 163] ~127 65 65