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Family GP022430


Family ID GP022430  add to my list RDF
Family name BZIP transcription factor subfamily 6  
Comment
Curation status ?
Found in Spermatophyta plant-specific
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
BZIP transcription factor family (plant-specificity: 93%)
GP000275 (1050)
2
BZIP transcription factor subfamily 6 (plant-specificity: 100%)
GP022430 (152)
3 GP042810 (111) ,
(plant-specificity: 100%)
GP119786 (21) ,
(plant-specificity: 100%)
GP047648 (20)
4 GP072129 (111) ,
(plant-specificity: 100%)
GP081880 (16) ,
(plant-specificity: 100%)
GP134645 (11) ,
(plant-specificity: 100%)
GP078874 (9) ,
(plant-specificity: 100%)
GP139038 (5)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 152
Species Count (w/o splice) Count (w/ splice)
4 4
3 3
6 6
7 7
6 6
4 4
3 3
3 4
3 3
4 4
5 8
3 4
3 3
3 3
6 6
4 4
4 5
4 4
6 6
4 13
2 2
7 16
1 1
5 5
3 6
8 8
2 2
2 3
2 2
1 1
2 5
1 1


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Basic-leucine zipper domain
IPR004827



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Species
Information to display
?


(click on the button above to get your protein list)