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Family GP122751


Family ID GP122751  add to my list RDF
Family name Unannotated cluster  
Curation status ?
Found in Ostreococcus tauri
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Transcription elongation factor, iis type family (plant-specificity: 30%)
GP001091 (362)
2
DNA-directed RNA polymerase III subunit C11 family (plant-specificity: 11%)
GP021455 (51)
3 GP122751 (7)
4 GP136882 (7)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 7
Species Count (w/o splice) Count (w/ splice)
7 7


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
Zinc finger, TFIIS-type
IPR001222
DNA-directed RNA polymerase, subunit C11/M/9
IPR012164
DNA-directed RNA polymerase, M/15kDa subunit
IPR001529



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Species
Information to display
?


(click on the button above to get your protein list)