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Family GP069308


Family ID GP069308  add to my list RDF
Family name Unannotated cluster  
Family Ontology
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molecular_function
ADP binding
GO:0043531 (72%) - ADP binding
Curation status ?
Found in Embryophyta
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Probable NB-ARC superfamily (plant-specificity: 30%)
GP000008 (11484) ,
Haloacid dehalogenase hydrolase family
GP001833 (204)
2
Disease resistance protein CC-NBS-LRR class family
GP015056 (5086) , GP017202 (137)
3 GP039777 (4950)
4 GP069308 (4724)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 4724
Species Count (w/o splice) Count (w/ splice)
3 3
11 11
22 22
2 2
112 112
71 71
150 150
165 165
237 264
94 100
128 128
119 119
56 68
103 104
306 306
270 270
163 163
174 174
10 15
31 31
245 245
128 144
132 132
219 250
76 76
132 132
28 28
495 495
94 94
347 348
47 47
170 182
142 161
112 112


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
TEA/ATTS
IPR000818
TEA/ATTS Family 1 (2) Yes
Ornithine decarboxylase antizyme
IPR002993
Ornithine decarboxylase antizyme Family 1 (1) Yes
Barrier- to-autointegration factor, BAF
IPR004122
Barrier- to-autointegration factor, BAF Family 1 (1) Yes
PKC-activated phosphatase-1 inhibitor
IPR008025
PKC-activated phosphatase-1 inhibitor Family 1 (1) Yes
Necrosis inducing protein
IPR008701
Necrosis inducing protein Family 1 (2) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
NB-ARC
IPR002182



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Species
Information to display
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(click on the button above to get your protein list)