Family GP001135


Family ID GP001135  add to my list RDF
Family name Diacylglycerol kinase family   suggest a name
Cross-reference(s) PMID:
Diacylglycerol kinases: why so many of them?
17512245
Family Ontology
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molecular_function
NAD+ kinase activity
GO:0003951 (1%) - NAD+ kinase activity
diacylglycerol kinase activity
GO:0004143 (85%) - diacylglycerol kinase activity
biological_process
protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007205 (85%) - protein kinase C-activating G-protein coupled receptor signaling pathway
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1
Diacylglycerol kinase family
GP001135 (252)
2 GP018439 (95) , GP018711 (85) ,
Ceramide kinase subfamily
GP019878 (68) , GP029433 (3)
3 GP043149 (95) , GP043463 (85) , GP044804 (68) , GP056648 (3)
4 GP072653 (95) , GP072978 (85) , GP074411 (68) , GP088771 (3)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 252
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
1 1
6 10
4 4
7 7
3 3
6 6
6 6
6 6
7 7
7 11
8 10
7 7
7 7
6 13
7 7
3 3
4 4
4 4
6 6
4 8
3 3
11 11
6 15
4 4
4 19
4 4
5 5
3 5
13 13
6 6
5 5
4 4
4 7
8 14
4 4


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Diacylglycerol kinase, catalytic domain
IPR001206
Diacylglycerol kinase, catalytic domain Domain 85 (213) No
ATP-NAD kinase-like domain
IPR016064
ATP-NAD kinase-like domain Domain 87 (220) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR001206 IPR016064


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Species
Information to display
?


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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.


Alignment and filtration statistics:

Overall family sequences Sequences used for alignment (w/o splice) Sequences kept after filtration [min; median; max] ~average sequence length Alignment length Masked alignment length
252 196 (78%) 156 (62%) [58; 490; 1181] ~506 2917 222