Family GP015460


Family ID GP015460  add to my list RDF
Family name Phosphate permease family   suggest a name
Cross-reference(s) PMID:
Phosphate transporter gene family of Arabidopsis thaliana.
9872450
Family Ontology
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molecular_function
transmembrane transporter activity
GO:0022857 (88%) - transmembrane transporter activity
Curation status ?
Found in No specificity
Phylogenetic analyzes Did not pass filtration




Clustering level Family ID (number of sequences)
1 GP000544 (472)
2
Phosphate permease family
GP015460 (472)
3 GP040117 (472)
4 GP069603 (472)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 472
Species Count (w/o splice) Count (w/ splice)
4 4
4 4
7 8
7 7
31 31
8 8
19 19
12 12
25 25
8 8
17 21
14 14
5 5
20 20
14 15
13 13
10 10
14 14
9 9
9 9
11 12
7 7
11 11
14 14
9 9
17 19
9 9
11 11
7 7
33 33
12 12
14 14
14 14
8 9
15 17
18 18


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
Phosphate permease
IPR004738
Phosphate permease Family 50 (236) Yes
General substrate transporter
IPR005828
General substrate transporter Family 88 (415) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Major facilitator superfamily domain, general substrate transporter
IPR016196
Major facilitator superfamily domain, general substrate transporter Domain 90 (427) No
Major facilitator superfamily domain
IPR020846
Major facilitator superfamily domain Domain 82 (388) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR016196 IPR020846 IPR005828 IPR004738


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Species
Information to display
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Alignment not available.
[Masking step 1 details] [Masking step 2 details] [Filtration details] [Global HMM file]

Phylogeny tree not available.