Family GP015864


Family ID GP015864  add to my list RDF
Family name Pseudo-response regulator family   suggest a name
Synonym(s) Two-component response regulator-like PRR
Family Ontology
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molecular_function
protein binding
GO:0005515 (1%) - protein binding
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Signal transduction superfamily (plant-specificity: 60%)
GP000129 (2217)
2
Pseudo-response regulator family
GP015864 (422)
3 GP040511 (332) , GP043528 (81) ,
(plant-specificity: 19%)
GP121711 (9)
4 GP070715 (212) , GP072526 (120) , GP073040 (81) ,
(plant-specificity: 19%)
GP135471 (9)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 422
Species Count (w/o splice) Count (w/ splice)
3 3
17 17
4 7
5 5
2 2
5 5
11 11
12 12
9 9
8 8
5 18
5 5
5 5
5 5
10 19
4 4
5 5
4 4
8 8
9 9
6 9
6 6
27 27
13 29
6 6
7 54
9 9
13 13
3 7
16 16
7 7
13 13
7 7
8 11
15 39
8 8


Information to display




(click on chart bars above to get species proteins)


Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Signal transduction response regulator, receiver domain
IPR001789
Signal transduction response regulator, receiver domain Domain 82 (345) No
CCT domain
IPR010402
CCT domain Domain 73 (307) No
CheY-like superfamily
IPR011006
CheY-like superfamily Domain 84 (353) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR011006 IPR001789 IPR010402


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Species
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