Family GP016122


Family ID GP016122  add to my list RDF
Family name Metacaspase subfamily   suggest a name
Family Ontology
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N/A
Curation status ?
Found in Viridiplantae
Phylogenetic analyzes Not available




Clustering level Family ID (number of sequences)
1
Caspase family
GP000701 (414)
2
Metacaspase subfamily
GP016122 (246)
3 GP040742 (244)
4 GP070158 (244)
Table 1: This table displays which relationship has the selected family with other families in GreenPhyl clustering ?.




Legend:
  • Families (clustering)
    • Sequences are clustered and classified at 4 levels (from less to more stringent).
    • The number between parenthesis indicates the number of sequences in the cluster.
    • Selected family is highlighted like this.
    • Annotated gene families are underlined and gene family name pops up when you move your mouse cursor over.
    • Gene families are coloured in this color when the phylogenetic analyses are available.


Sequence total: 246
Species Count (w/o splice) Count (w/ splice)
1 1
2 2
2 6
2 2
9 9
3 3
5 5
4 4
4 4
3 3
4 4
6 8
7 7
6 6
9 12
6 7
6 6
5 5
6 6
5 5
3 5
5 5
7 7
7 15
8 8
10 15
7 7
11 11
4 5
12 12
7 7
7 8
6 6
5 5
11 20
5 5


Information to display




(click on chart bars above to get species proteins)


Close InterPro family
IPR Annotation Type % Occurence Specificity
5-Hydroxytryptamine 6 receptor
IPR002232
5-Hydroxytryptamine 6 receptor Family 1 (1) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Peptidase C14, caspase domain
IPR011600
Peptidase C14, caspase domain Domain 91 (225) No

Close Domain architecture
Clustering
 



Close Representative InterPro domains - Consensus schema
IPR011600


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Species
Information to display
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