Family GP000313


Family ID
GP000313  add to my list
Family name
ZF-HD homeobox protein, Cys/His-rich dimerisation domain containing group   suggest a name
Synonym(s)
Zf-HD transcription factor
Cross-reference(s)
PMID:
Characterization of a novel class of plant homeodomain proteins that bind to the C4 phosphoenolpyruvate carboxylase gene of Flaveria trinervia.
11289511
Comment
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 995
Species Sequence Count
9
17
12
26
45
35
33
20
23
23
17
12
12
10
28
32
11
13
13
12
7
18
10
45
25
11
22
21
29
22
23
34
26
28
15
17
19
21
38
23
20
22
16
27
23
30




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Homeodomain, ZF-HD class
IPR006455 		Homeodomain, ZF-HD class Domain 68 (675) No
ZF-HD homeobox protein, Cys/His-rich dimerisation domain
IPR006456 		ZF-HD homeobox protein, Cys/His-rich dimerisation domain Domain 95 (945) No
Homeobox-like domain superfamily
IPR009057 		Homeobox-like domain superfamily Homologous_superfamily 70 (696) No

Close Representative InterPro domains - Consensus schema
IPR009057 IPR006456 IPR006455

Close Domain architecture
Clustering




Note: Alignment too large for online display.
Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)