Family GP000397


Family ID
GP000397  add to my list
Family name
Cytokinin dehydrogenase family   suggest a name
Synonym(s)
Cytokinin dehydrogenase 1, fad and cytokinin binding
Cross-reference(s)
PMID:
Structure and function of cytokinin oxidase/dehydrogenase genes of maize, rice, Arabidopsis and other species.
12721786 PMID:
Regulation of plant growth by cytokinin.
11504909 PMID:
Molecular and biochemical characterization of a cytokinin oxidase from maize.
11154345
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 561
Species Sequence Count
8
7
6
12
16
12
12
18
9
12
11
10
14
11
15
11
5
9
8
11
6
13
13
15
9
13
12
10
15
11
10
20
21
18
9
10
12
13
33
9
8
10
5
16
13
20




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
FAD linked oxidase, N-terminal
IPR006094 		FAD linked oxidase, N-terminal Domain 86 (482) No
Cytokinin dehydrogenase 1, FAD/cytokinin binding domain
IPR015345 		Cytokinin dehydrogenase 1, FAD/cytokinin binding domain Domain 93 (521) No
FAD-linked oxidase-like, C-terminal
IPR016164 		FAD-linked oxidase-like, C-terminal Homologous_superfamily 92 (518) No
FAD-binding domain, PCMH-type
IPR016166 		FAD-binding domain, PCMH-type Domain 84 (472) No
FAD-binding, type PCMH, subdomain 1
IPR016167 		FAD-binding, type PCMH, subdomain 1 Homologous_superfamily 90 (504) No
FAD-binding, type PCMH, subdomain 2
IPR016169 		FAD-binding, type PCMH, subdomain 2 Homologous_superfamily 90 (506) No
Cytokinin dehydrogenase, C-terminal domain superfamily
IPR016170 		Cytokinin dehydrogenase, C-terminal domain superfamily Homologous_superfamily 91 (511) No
FAD-binding, type PCMH-like superfamily
IPR036318 		FAD-binding, type PCMH-like superfamily Homologous_superfamily 91 (509) No

Close Representative InterPro domains - Consensus schema
IPR016170 IPR016164 IPR016167 IPR036318 IPR006094 IPR015345 IPR016166 IPR016169

Close Domain architecture
Clustering




Note: Alignment too large for online display.
Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)