Family GP001444


Family ID
GP001444  add to my list
Family name
Expressed or hypothetical protein group   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 158
Species Sequence Count
3
2
2
12
3
3
3
4
6
7
2
1
5
1
2
11
1
1
1
4
1
3
2
3
4
2
2
2
4
2
3
4
3
3
3
3
2
6
8
2
6
2
2
2
5
5




Close InterPro family
IPR Annotation Type % Occurence Specificity
COPII coat assembly protein, Sec16
IPR024880 		COPII coat assembly protein, Sec16 Family 82 (130) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Ancestral coatomer element 1, Sec16/Sec31
IPR024298 		Ancestral coatomer element 1, Sec16/Sec31 Domain 88 (139) No
Sec16, central conserved domain
IPR024340 		Sec16, central conserved domain Domain 85 (134) No

Close Representative InterPro domains - Consensus schema
IPR024298 IPR024880 IPR024340

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)