Family GP002974


Family ID
GP002974  add to my list
Family name
Transcription elongation factor spt4 family   suggest a name
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 155
Species Sequence Count
3
4
3
2
9
5
5
2
2
3
2
2
7
2
2
6
2
2
3
3
2
4
2
4
4
2
2
2
10
2
2
2
2
3
3
4
3
4
7
2
2
2
2
3
4
7




Close InterPro family
IPR Annotation Type % Occurence Specificity
Mini-ribonuclease 3 family
IPR008226 		Mini-ribonuclease 3 family Family 12 (19) Yes
Transcription initiation Spt4
IPR009287 		Transcription initiation Spt4 Family 45 (69) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema
Spt4/RpoE2 zinc finger
IPR022800 IPR009287
Spt4 superfamily
IPR038510

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)