Family GP001984
Family ID
GP001984
add to my list
Family name
Dna-directed rna polymerase rpb8 subunit family
suggest a name
Cross-reference(s)
PMID:
Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs.
16341226
PMID:
Structural basis of transcription: role of the trigger loop in substrate specificity and catalysis.
17129781
PMID:
Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.
15610738
PMID:
Structural basis of transcription: separation of RNA from DNA by RNA polymerase II.
14963331
Curation status ?
Taxonomic coverage
Gene tree
Family level
1
Sequence total: 118
Species | Sequence Count |
---|---|
1 | |
2 | |
1 | |
5 | |
1 | |
1 | |
1 | |
4 | |
2 | |
2 | |
3 | |
1 | |
3 | |
2 | |
1 | |
3 | |
2 | |
2 | |
2 | |
5 | |
1 | |
1 | |
1 | |
3 | |
3 | |
1 | |
4 | |
3 | |
10 | |
3 | |
4 | |
2 | |
2 | |
2 | |
2 | |
3 | |
2 | |
7 | |
2 | |
2 | |
3 | |
3 | |
3 | |
2 | |
5 |
InterPro family
IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
RNA polymerase, Rpb8
IPR005570
|
RNA polymerase, Rpb8 | Family | 93 | (110) | No |
Other InterPro signatures
IPR | Annotation | Type | % | Occurence | Specificity |
---|---|---|---|---|---|
Nucleic acid-binding, OB-fold
IPR012340
|
Nucleic acid-binding, OB-fold | Homologous_superfamily | 94 | (111) | No |
Domain architecture
You can filter species displayed in the phylogenomic tree by checking the species you want:
(click on the button above to get your homolog prediction list)