Family GP003912


Family ID
GP003912  add to my list
Family name
VPRBP/DCAF1 family   suggest a name
Cross-reference(s)
PMID:
Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes.
18552200
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 88
Species Sequence Count
1
1
1
11
2
2
2
1
1
2
1
1
1
1
2
6
1
1
1
2
2
3
1
3
1
1
1
1
4
1
1
3
2
1
1
1
1
2
2
2
1
1
1
1
5
4




Close InterPro family
IPR Annotation Type % Occurence Specificity
VPRBP/DCAF1 family
IPR033270 		VPRBP/DCAF1 family Family 44 (39) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
WD40 repeat
IPR001680 		WD40 repeat Repeat 74 (65) No
LIS1 homology motif
IPR006594 		LIS1 homology motif Domain 84 (74) No
WD40/YVTN repeat-like-containing domain superfamily
IPR015943 		WD40/YVTN repeat-like-containing domain superfamily Homologous_superfamily 88 (77) No
Armadillo-type fold
IPR016024 		Armadillo-type fold Homologous_superfamily 66 (58) No
WD40-repeat-containing domain superfamily
IPR036322 		WD40-repeat-containing domain superfamily Homologous_superfamily 85 (75) No

Close Representative InterPro domains - Consensus schema
IPR016024 IPR015943 IPR001680 IPR036322 IPR006594 IPR033270

Close Domain architecture
Clustering





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