Family GP003111


Family ID
GP003111  add to my list
Family name
Autophagy protein 6 family   suggest a name
Cross-reference(s)
PMID:
The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation.
11689437 PMID:
A new protein conjugation system in human. The counterpart of the yeast Apg12p conjugation system essential for autophagy.
9852036 PMID:
Apg16p is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway.
10406794 PMID:
Apg5p functions in the sequestration step in the cytoplasm-to-vacuole targeting and macroautophagy pathways.
10712513 PMID:
Apg14p and Apg6/Vps30p form a protein complex essential for autophagy in the yeast, Saccharomyces cerevisiae.
9712845
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 85
Species Sequence Count
3
1
5
1
2
3
2
1
1
2
15
1
2
1
1
1
1
1
1
1
1
1
1
1
1
1
1
3
1
1
3
2
2
2
2
1
1
2
1
1
2
1
1
4
2




Close InterPro family
IPR Annotation Type % Occurence Specificity
Atg6/Beclin
IPR007243 		Atg6/Beclin Family 42 (36) Yes

Close Other InterPro signatures

No other significant IPR (i.e. > 25%)


Close Representative InterPro domains - Consensus schema
Atg6/Beclin C-terminal domain superfamily
IPR038274 IPR007243
Atg6/beclin, coiled-coil domain
IPR041691
Atg6, BARA domain
IPR040455

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)