Family GP003375


Family ID
GP003375  add to my list
Family name
OsCOIN homologs family   suggest a name
Cross-reference(s)
PMID:
Overexpression of OsCOIN, a putative cold inducible zinc finger protein, increased tolerance to chilling, salt and drought, and enhanced proline level in rice.
17549515
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
1


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 88
Species Sequence Count
2
1
1
1
3
2
2
1
1
9
1
1
4
1
2
6
1
1
1
1
1
2
1
1
1
2
1
1
1
1
1
1
1
1
2
1
1
2
13
1
1
2
1
1
1
4




Close InterPro family

No IPR family


Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Zinc finger, RING-type
IPR001841 		Zinc finger, RING-type Domain 81 (71) No
Tetratricopeptide-like helical domain superfamily
IPR011990 		Tetratricopeptide-like helical domain superfamily Homologous_superfamily 78 (69) No
Zinc finger, RING/FYVE/PHD-type
IPR013083 		Zinc finger, RING/FYVE/PHD-type Homologous_superfamily 81 (71) No
Zinc finger, RING-type, conserved site
IPR017907 		Zinc finger, RING-type, conserved site Conserved_site 80 (70) No

Close Representative InterPro domains - Consensus schema
IPR011990 IPR013083 IPR001841 IPR017907

Close Domain architecture
Clustering





Download alignment file: 
FASTA







You can filter species displayed in the phylogenomic tree by checking the species you want:
Species

Download tree file: 
XMLNewick





for (default: all):
Species


(click on the button above to get your homolog prediction list)