Family GP015138


Family ID
GP015138  add to my list
Family name
Very-long-chain 3-ketoacyl-CoA synthase family   suggest a name
Cross-reference(s)
PMID:
FIDDLEHEAD, a gene required to suppress epidermal cell interactions in Arabidopsis, encodes a putative lipid biosynthetic enzyme.
10655527 PMID:
Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.
16765910 PMID:
Directed tagging of the Arabidopsis FATTY ACID ELONGATION1 (FAE1) gene with the maize transposon activator.
7734965 PMID:
Active-site residues of a plant membrane-bound fatty acid elongase beta-ketoacyl-CoA synthase, FAE1 KCS.
11341960
Curation status ?
Taxonomic coverage
Magnoliopsida
Gene tree
Family level
2


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 1448
Species Sequence Count
33
21
19
29
51
41
32
25
26
34
21
24
28
20
24
57
23
15
16
29
17
23
17
30
41
50
32
28
41
26
27
34
25
35
25
41
20
22
89
24
24
32
20
83
41
33




Close InterPro family
IPR Annotation Type % Occurence Specificity
Very-long-chain 3-ketoacyl-CoA synthase
IPR012392 		Very-long-chain 3-ketoacyl-CoA synthase Family 88 (1280) No

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
FAE1/Type III polyketide synthase-like protein
IPR013601 		FAE1/Type III polyketide synthase-like protein Domain 95 (1376) No
3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal
IPR013747 		3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal Domain 85 (1231) No
Thiolase-like
IPR016039 		Thiolase-like Homologous_superfamily 96 (1391) No

Close Representative InterPro domains - Consensus schema
IPR016039 IPR012392 IPR013601 IPR013747

Close Domain architecture
Clustering




Alignment available at level 1 family (
Very-long-chain 3-ketoacyl-CoA synthase
GP000183 ).





Phylogeny tree available at level 1 family ( GP000183 ).