Family GP016322


Family ID
GP016322  add to my list
Family name
Geranylgeranyl pyrophosphate synthetase subfamily   suggest a name
Cross-reference(s)
PMID:
Geranylgeranyl pyrophosphate synthase encoded by the newly isolated gene GGPS6 from Arabidopsis thaliana is localized in mitochondria.
9349257 PMID:
Five geranylgeranyl diphosphate synthases expressed in different organs are localized into three subcellular compartments in Arabidopsis.
10759500 PMID:
Cloning and functional expression of a novel geranylgeranyl pyrophosphate synthase gene from Arabidopsis thaliana in Escherichia coli.
9150607
Curation status ?
Taxonomic coverage
Gene tree
Family level
2


(click on individual chart bar to display sequence composition below. Several bars can be selected and will remain highlighted)
Sequence total: 354
Species Sequence Count
4
12
2
10
23
15
17
4
10
6
4
24
12
14
15
7
5
3
4
8
3
6
7
12
8
7
7
8
6
6
4
7
5
12
3
3
6
3
6
7
7
3
5
4
7
3




Close InterPro family
IPR Annotation Type % Occurence Specificity
Polyprenyl synthetase
IPR000092
Polyprenyl synthetase Family 90 (320) No
Exonuclease VII, small subunit
IPR003761
Exonuclease VII, small subunit Family 1 (5) Yes

Close Other InterPro signatures
IPR Annotation Type % Occurence Specificity
Isoprenoid synthase domain superfamily
IPR008949
Isoprenoid synthase domain superfamily Homologous_superfamily 98 (347) No
Polyprenyl synthetase, conserved site
IPR033749
Polyprenyl synthetase, conserved site Conserved_site 73 (257) No

Close Representative InterPro domains - Consensus schema
IPR008949 IPR000092 IPR033749

Close Domain architecture
Clustering




Alignment available at level 1 family (
Polyprenyl synthetase family
GP000470 ).





Phylogeny tree available at level 1 family ( GP000470 ).